CmaCh14G007220 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G007220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein transport protein Sec61 subunit gamma
Location	Cma_Chr14: 3630685 .. 3632523 (-)
RNA-Seq Expression	CmaCh14G007220
Synteny	CmaCh14G007220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAATTTTGAGCTCCTGCAGAGAAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGGTACAAATTCCGAAGCCATTTTCGTCTCTTTGATTTTGTAGTTGTTTTGAATCTTTGGCGGAGTTCTTATAACCAATTTCCTCTACTCCGGGAGATTTGTAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTGGTGATGGGATTTGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAGGTCAGGATTTTTTTTTACTTGTGCCTCTCTAGGTTTCACTGTTTTCCGAATTGAGTAATTGCTTGATTCTTTCTCGAGGTTGCGTTCCTAAAATTAATAAAATAGTCCGATCTTATTGAAGGTAAACAGGTTTGATCTATGTCGAATTCTGTGTTATCCAAGTTTAGTCCCTTTCTAGTCTTGAGAATCAAATAAAATTGGATTCTGGAGAACGGAATTGAAATCTACAGCTTCTCTTTGACTTGGGGAATAATATGATTAATGTTTTTCGATTGTTAGATTAATCTATATCTAGGGCATGTAGGTTATGAAGTGAGAAATGTTTAATTTGTTAGATAAATGTTTTAGGTATGATTCTATGAATTACCTAAGTACGCCATTGATGGGTTGATTGAGTTTTTTTTCTTCACGACTCCTCTTGGCTTTCTTGTTTCTTAAAGGCTCTCCCTATACACCATATTCCCTTTCGAACAAAATTATCCTCAAACTTGTACAACCATGAGGAGAAAACACATCTAGTCTTCTACATCGATGGATGCCGAGCTCGATAACAAAAGTCCGTAACCCATATCAAGCCTTGTAGATTGGACATTGTTAGCTATATAGAGGAAGGGGGAAAGGGGGGAAAACTTACCTGGGAACTGTAACTGCTCGCCAATACCCTACCTCAATCTTATAACGCACGAAGGATGGTGGAGACCAATTCTTGTGGGAGAGAGGTGAGTTTGACCCGCATTTGACTCCACTTGCTTCTAACTCCCTATTTGCCATGTGACAACCTGACTTTTCGAAGGGTCGGCAGGATATGGGAGCTTCAACTCATGCCTCGGTTTACTAAAAGAACCAATGCTATCCCACTTCCTTCTATTCAAAAAGGCGAGCTGCCCTTAGTTAAACAAAAAGACCAAATTCGGGGGCAGAACCATTTGGCTCACTTTTGCATAATCATAGTGATTGATGTAGTTAGCATTTTAATTTATGTCCGCACGATTGTACACTGTTTCCATTCCCAAATAACAGTCGAATGTAATAATTGATGAGTGTGACCTCTTTTTTAGACAACATTAAGCTGCGTAAAACTTTGAATTGGTTCTGCCTCTTGACAATCATTCATTATACCTGTTGAATCTGTGTTGCAGGCAGCTGAAGCCACAAAAGGAGCAAGCTGGCCGAAATAGATGGGAACCTGATCTACTATTTCAAATCCTTGCTGATGTTTTTGTTAATTTAAAAGCTTAATTTCTTGTCCATACGGTAAGTAGCAGACTTCCATGAATGGCTGTAACGAATTGTCAGGATTATGTCTAACTTTCTGATTAATCCAATGTGTTTGTTCATGATTACTGGTTATTTTAGGGTAATAAAGGAACAAGTTTTGGCTTTATGAGATGAAAGTTTTGGGTTCGTCATTGGGATGAAGATTATATTTACTCCCCTTTCCTTTATGCTGTCAAGCTTTAACGATTGGCAAATTAAACTAAATACACAGCAAAAGAAG

mRNA sequence

TGGAAATTTTGAGCTCCTGCAGAGAAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTGGTGATGGGATTTGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAGGCAGCTGAAGCCACAAAAGGAGCAAGCTGGCCGAAATAGATGGGAACCTGATCTACTATTTCAAATCCTTGCTGATGTTTTTGTTAATTTAAAAGCTTAATTTCTTGTCCATACGGTAAGTAGCAGACTTCCATGAATGGCTGTAACGAATTGTCAGGATTATGTCTAACTTTCTGATTAATCCAATGTGTTTGTTCATGATTACTGGTTATTTTAGGGTAATAAAGGAACAAGTTTTGGCTTTATGAGATGAAAGTTTTGGGTTCGTCATTGGGATGAAGATTATATTTACTCCCCTTTCCTTTATGCTGTCAAGCTTTAACGATTGGCAAATTAAACTAAATACACAGCAAAAGAAG

Coding sequence (CDS)

ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTGGTGATGGGATTTGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAG

Protein sequence

MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Homology

[Close]

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.4e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-27
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-21
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL
Match: A0A1U8ISF2 (protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=LOC107899725 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL
Match: A0A5D2CZA3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL
Match: A0A0D2TL23 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL
Match: A0A5D2VBP1 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL
Match: A0A6J1J2N1 (protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 GN=LOC111482125 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. NCBI nr
Match: XP_004145664.1 (protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis melo] >XP_012460780.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460781.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460782.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_016681000.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016681001.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_022156520.1 protein transport protein Sec61 subunit gamma [Momordica charantia] >XP_022934076.1 protein transport protein Sec61 subunit gamma-like [Cucurbita moschata] >XP_022983556.1 protein transport protein Sec61 subunit gamma-like [Cucurbita maxima] >XP_023526351.1 protein transport protein Sec61 subunit gamma-like [Cucurbita pepo subsp. pepo] >XP_038876188.1 protein transport protein Sec61 subunit gamma-like [Benincasa hispida] >KAA3464170.1 protein transport protein Sec61 subunit gamma [Gossypium australe] >KAB2034429.1 hypothetical protein ES319_D04G085300v1 [Gossypium barbadense] >KAG6581101.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017832.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >MBA0572089.1 hypothetical protein [Gossypium lobatum] >MBA0630508.1 hypothetical protein [Gossypium davidsonii] >MBA0666224.1 hypothetical protein [Gossypium klotzschianum] >MBA0750649.1 hypothetical protein [Gossypium gossypioides] >MBA0842256.1 hypothetical protein [Gossypium armourianum] >MBA0872547.1 hypothetical protein [Gossypium schwendimanii] >TYG73313.1 hypothetical protein ES288_D04G091500v1 [Gossypium darwinii] >TYH76504.1 hypothetical protein ES332_D04G091100v1 [Gossypium tomentosum] >TYI86738.1 hypothetical protein E1A91_D04G086100v1 [Gossypium mustelinum])

HSP 1 Score: 136.7 bits (343), Expect = 7.4e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. NCBI nr
Match: XP_028063760.1 (protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063763.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063764.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063765.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063766.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063767.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099424.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099425.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099426.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099427.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099428.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099430.1 protein transport protein Sec61 subunit gamma [Camellia sinensis])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDALDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. NCBI nr
Match: XP_007215225.2 (uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical protein PRUPE_3G307000 [Prunus persica] >ONI19950.1 hypothetical protein PRUPE_3G307000 [Prunus persica])

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 75  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 134

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 135 INNIIVGSG 143

[Close]

BLAST of CmaCh14G007220 vs. NCBI nr
Match: XP_012489479.1 (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489480.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489481.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_016686809.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016695151.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >XP_016695152.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >KAB2002517.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense] >TYG44137.1 hypothetical protein ES288_D11G074400v1 [Gossypium darwinii] >TYH42588.1 hypothetical protein ES332_D11G073800v1 [Gossypium tomentosum] >TYI54418.1 hypothetical protein E1A91_D11G073600v1 [Gossypium mustelinum] >KAB2002518.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense])

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. NCBI nr
Match: XP_008231108.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_016649155.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_021823017.1 protein transport protein Sec61 subunit gamma [Prunus avium] >XP_038698211.1 protein transport protein Sec61 subunit gamma isoform X2 [Tripterygium wilfordii] >PQP94489.1 uncharacterized protein Pyn_35397 [Prunus yedoensis var. nudiflora] >CAB4275454.1 unnamed protein product [Prunus armeniaca] >PQP96178.1 uncharacterized protein Pyn_36215 [Prunus yedoensis var. nudiflora] >CAB4305825.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of CmaCh14G007220 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 128.6 bits (322), Expect = 1.9e-30
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of CmaCh14G007220 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 128.6 bits (322), Expect = 1.9e-30
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of CmaCh14G007220 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 123.2 bits (308), Expect = 7.9e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

The following BLAST results are available for this feature:

BLAST of CmaCh14G007220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38385	2.4e-30	95.65	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX...	[more]
P0DI74	2.6e-29	94.12	Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DI75	2.6e-29	94.12	Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SMP2	1.1e-27	89.71	Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7Z1B8	1.6e-21	73.53	Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349...	[more]

BLAST of CmaCh14G007220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8ISF2	3.6e-29	100.00	protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=L...	[more]
A0A5D2CZA3	3.6e-29	100.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=...	[more]
A0A0D2TL23	3.6e-29	100.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 ...	[more]
A0A5D2VBP1	3.6e-29	100.00	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 P...	[more]
A0A6J1J2N1	3.6e-29	100.00	protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CmaCh14G007220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145664.1	7.4e-29	100.00	protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 ...	[more]
XP_028063760.1	1.3e-28	98.55	protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762....	[more]
XP_007215225.2	1.7e-28	98.55	uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical pr...	[more]
XP_012489479.1	1.7e-28	98.55	PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond...	[more]
XP_008231108.1	1.7e-28	98.55	PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_01664...	[more]

BLAST of CmaCh14G007220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24920.1	1.9e-30	94.12	secE/sec61-gamma protein transport protein	[more]
AT5G50460.1	1.9e-30	94.12	secE/sec61-gamma protein transport protein	[more]
AT3G48570.1	7.9e-29	89.71	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 13..65 e-value: 1.2E-14 score: 54.0
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PROSITE	PS01067	SECE_SEC61G	coord: 14..42
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	HAMAP	MF_00422	SecE	coord: 9..64 score: 12.919514
IPR008158	Protein translocase SEC61 complex, gamma subunit	TIGRFAM	TIGR00327	TIGR00327	coord: 11..66 e-value: 1.8E-16 score: 57.7
IPR023391	Protein translocase SecE domain superfamily	GENE3D	1.20.5.820	Preprotein translocase SecE subunit	coord: 7..68 e-value: 1.3E-31 score: 110.0
IPR023391	Protein translocase SecE domain superfamily	SUPERFAMILY	103456	Preprotein translocase SecE subunit	coord: 5..65
None	No IPR available	PANTHER	PTHR12309:SF24	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3	coord: 1..69
None	No IPR available	PANTHER	PTHR12309	SEC61 GAMMA SUBUNIT	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G007220.1	CmaCh14G007220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071261	Ssh1 translocon complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity