Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTCAGCGAACGTTTCAGGGCTGTCGATCCACTTCAACGCCCAATCGGCCTTCTTCTTGACGCAGGGGACAGTCTCAATCGCGCGAAACAACAAATTCTTCTCGTTCGAGTCTTTAATATAGGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA
mRNA sequence
ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA
Coding sequence (CDS)
ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA
Protein sequence
MEQKLPEKKIPSTQAKAKIRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVLLVES
Homology
BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match:
A0A2P5FC76 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089040 PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 6.6e-14
Identity = 38/62 (61.29%), Postives = 52/62 (83.87%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
+ +++ VHLGVD+LDGDLE++EG+ L +LD LHEPPGE+LQ+DA+ G EE ++V DEVL
Sbjct: 202 VGLEEEAVHLGVDVLDGDLEAVEGTRLRDLDLLHEPPGEVLQDDAVRGGEEGEHVGDEVL 261
Query: 79 LV 81
LV
Sbjct: 262 LV 263
BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match:
A0A540KJW0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039987 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 5.8e-10
Identity = 33/61 (54.10%), Postives = 48/61 (78.69%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
+R +K+ VHLG+D+L+GDLE +EG+ L L LH+P +IL++DAIGGSE+ KN+ +EV
Sbjct: 166 VRLEKEAVHLGMDVLNGDLEPVEGAGLDELGLLHKPLSKILKDDAIGGSEKGKNMRNEVP 225
Query: 79 L 80
L
Sbjct: 226 L 226
BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match:
A0A6A5MER7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00048484 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 8.4e-09
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEV 78
IRFKK+ +HL ++ILD DLES+E + LS+L HEP GE+ ++D++GG EE ++V DEV
Sbjct: 59 IRFKKEAIHLRMNILDCDLESVECTRLSDLYLCHEPTGEVFKDDSVGGGEEGEDVFDEV 117
BLAST of CmaCh14G007210 vs. NCBI nr
Match:
PON95382.1 (hypothetical protein TorRG33x02_089040 [Trema orientale])
HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13
Identity = 38/62 (61.29%), Postives = 52/62 (83.87%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
+ +++ VHLGVD+LDGDLE++EG+ L +LD LHEPPGE+LQ+DA+ G EE ++V DEVL
Sbjct: 202 VGLEEEAVHLGVDVLDGDLEAVEGTRLRDLDLLHEPPGEVLQDDAVRGGEEGEHVGDEVL 261
Query: 79 LV 81
LV
Sbjct: 262 LV 263
BLAST of CmaCh14G007210 vs. NCBI nr
Match:
TQD74487.1 (hypothetical protein C1H46_039987 [Malus baccata])
HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 33/61 (54.10%), Postives = 48/61 (78.69%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
+R +K+ VHLG+D+L+GDLE +EG+ L L LH+P +IL++DAIGGSE+ KN+ +EV
Sbjct: 166 VRLEKEAVHLGMDVLNGDLEPVEGAGLDELGLLHKPLSKILKDDAIGGSEKGKNMRNEVP 225
Query: 79 L 80
L
Sbjct: 226 L 226
BLAST of CmaCh14G007210 vs. NCBI nr
Match:
KAF1869202.1 (hypothetical protein Lal_00048484 [Lupinus albus])
HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 19 IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEV 78
IRFKK+ +HL ++ILD DLES+E + LS+L HEP GE+ ++D++GG EE ++V DEV
Sbjct: 59 IRFKKEAIHLRMNILDCDLESVECTRLSDLYLCHEPTGEVFKDDSVGGGEEGEDVFDEV 117
BLAST of CmaCh14G007210 vs. NCBI nr
Match:
KAG0455446.1 (hypothetical protein HPP92_024738 [Vanilla planifolia])
HSP 1 Score: 57.0 bits (136), Expect = 8.9e-05
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0
Query: 23 KKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVLLVE 82
++ VHL +++LDGDLE ++G L L HE P EIL+ND + EE ++V D++ L++
Sbjct: 13 EEAVHLRINVLDGDLEFVDGLDLWKLSLTHEAPDEILENDVVRRREEGEDVGDKLALLQ 71
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A2P5FC76 | 6.6e-14 | 61.29 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089040 PE=4 SV... | [more] |
| A0A540KJW0 | 5.8e-10 | 54.10 | Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039987 PE=4 SV=1 | [more] |
| A0A6A5MER7 | 8.4e-09 | 54.24 | Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00048484 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| PON95382.1 | 1.4e-13 | 61.29 | hypothetical protein TorRG33x02_089040 [Trema orientale] | [more] |
| TQD74487.1 | 1.2e-09 | 54.10 | hypothetical protein C1H46_039987 [Malus baccata] | [more] |
| KAF1869202.1 | 1.7e-08 | 54.24 | hypothetical protein Lal_00048484 [Lupinus albus] | [more] |
| KAG0455446.1 | 8.9e-05 | 42.37 | hypothetical protein HPP92_024738 [Vanilla planifolia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
