CmaCh14G007210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G007210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 3628384 .. 3628754 (-)
RNA-Seq ExpressionCmaCh14G007210
SyntenyCmaCh14G007210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTCAGCGAACGTTTCAGGGCTGTCGATCCACTTCAACGCCCAATCGGCCTTCTTCTTGACGCAGGGGACAGTCTCAATCGCGCGAAACAACAAATTCTTCTCGTTCGAGTCTTTAATATAGGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA

mRNA sequence

ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA

Coding sequence (CDS)

ATGGAACAGAAGCTCCCTGAGAAGAAAATTCCTTCAACGCAAGCGAAGGCTAAAATACGTTTCAAGAAGAAGACTGTACATCTCGGAGTGGATATTCTCGATGGCGATTTGGAATCCATAGAAGGCTCTAGCCTCAGCAACTTGGACTTCCTTCATGAACCGCCCGGCGAGATTCTCCAAAACGATGCCATCGGAGGCAGCGAAGAACGCAAGAACGTGAGTGATGAAGTGCTTCTCGTCGAAAGTTAA

Protein sequence

MEQKLPEKKIPSTQAKAKIRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVLLVES
Homology
BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match: A0A2P5FC76 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089040 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.6e-14
Identity = 38/62 (61.29%), Postives = 52/62 (83.87%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
           +  +++ VHLGVD+LDGDLE++EG+ L +LD LHEPPGE+LQ+DA+ G EE ++V DEVL
Sbjct: 202 VGLEEEAVHLGVDVLDGDLEAVEGTRLRDLDLLHEPPGEVLQDDAVRGGEEGEHVGDEVL 261

Query: 79  LV 81
           LV
Sbjct: 262 LV 263

BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match: A0A540KJW0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039987 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.8e-10
Identity = 33/61 (54.10%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
           +R +K+ VHLG+D+L+GDLE +EG+ L  L  LH+P  +IL++DAIGGSE+ KN+ +EV 
Sbjct: 166 VRLEKEAVHLGMDVLNGDLEPVEGAGLDELGLLHKPLSKILKDDAIGGSEKGKNMRNEVP 225

Query: 79  L 80
           L
Sbjct: 226 L 226

BLAST of CmaCh14G007210 vs. ExPASy TrEMBL
Match: A0A6A5MER7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00048484 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.4e-09
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEV 78
           IRFKK+ +HL ++ILD DLES+E + LS+L   HEP GE+ ++D++GG EE ++V DEV
Sbjct: 59  IRFKKEAIHLRMNILDCDLESVECTRLSDLYLCHEPTGEVFKDDSVGGGEEGEDVFDEV 117

BLAST of CmaCh14G007210 vs. NCBI nr
Match: PON95382.1 (hypothetical protein TorRG33x02_089040 [Trema orientale])

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13
Identity = 38/62 (61.29%), Postives = 52/62 (83.87%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
           +  +++ VHLGVD+LDGDLE++EG+ L +LD LHEPPGE+LQ+DA+ G EE ++V DEVL
Sbjct: 202 VGLEEEAVHLGVDVLDGDLEAVEGTRLRDLDLLHEPPGEVLQDDAVRGGEEGEHVGDEVL 261

Query: 79  LV 81
           LV
Sbjct: 262 LV 263

BLAST of CmaCh14G007210 vs. NCBI nr
Match: TQD74487.1 (hypothetical protein C1H46_039987 [Malus baccata])

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 33/61 (54.10%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVL 78
           +R +K+ VHLG+D+L+GDLE +EG+ L  L  LH+P  +IL++DAIGGSE+ KN+ +EV 
Sbjct: 166 VRLEKEAVHLGMDVLNGDLEPVEGAGLDELGLLHKPLSKILKDDAIGGSEKGKNMRNEVP 225

Query: 79  L 80
           L
Sbjct: 226 L 226

BLAST of CmaCh14G007210 vs. NCBI nr
Match: KAF1869202.1 (hypothetical protein Lal_00048484 [Lupinus albus])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0

Query: 19  IRFKKKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEV 78
           IRFKK+ +HL ++ILD DLES+E + LS+L   HEP GE+ ++D++GG EE ++V DEV
Sbjct: 59  IRFKKEAIHLRMNILDCDLESVECTRLSDLYLCHEPTGEVFKDDSVGGGEEGEDVFDEV 117

BLAST of CmaCh14G007210 vs. NCBI nr
Match: KAG0455446.1 (hypothetical protein HPP92_024738 [Vanilla planifolia])

HSP 1 Score: 57.0 bits (136), Expect = 8.9e-05
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 23 KKTVHLGVDILDGDLESIEGSSLSNLDFLHEPPGEILQNDAIGGSEERKNVSDEVLLVE 82
          ++ VHL +++LDGDLE ++G  L  L   HE P EIL+ND +   EE ++V D++ L++
Sbjct: 13 EEAVHLRINVLDGDLEFVDGLDLWKLSLTHEAPDEILENDVVRRREEGEDVGDKLALLQ 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5FC766.6e-1461.29Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089040 PE=4 SV... [more]
A0A540KJW05.8e-1054.10Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039987 PE=4 SV=1[more]
A0A6A5MER78.4e-0954.24Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00048484 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
PON95382.11.4e-1361.29hypothetical protein TorRG33x02_089040 [Trema orientale][more]
TQD74487.11.2e-0954.10hypothetical protein C1H46_039987 [Malus baccata][more]
KAF1869202.11.7e-0854.24hypothetical protein Lal_00048484 [Lupinus albus][more]
KAG0455446.18.9e-0542.37hypothetical protein HPP92_024738 [Vanilla planifolia][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G007210.1CmaCh14G007210.1mRNA