CmaCh13G002490 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh13G002490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr13: 2065330 .. 2071336 (-)
RNA-Seq ExpressionCmaCh13G002490
SyntenyCmaCh13G002490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTGTTTTAGAGTGGCTGTGTTCGATCAGATTCCAACTCCAGTCCTTGAAATTGAATGCTGTTCTTATTAAGACGATCAGATTATATCAACCAAATTATCAACGGAGAGATGAAATTCAGCTAACCTATTACAGAAATGAATCGTTGAAAAGAAGCAAAGAATCATGGAGAACGAATCAGAATTTTGCACAGTGCGAAGGCAGACCAGTCTCATGGTTCACCGCTACAATCTCAGAAACTTCACATTTCAGCACATCTTGCCCTAGCTTGGCTCCGGCGGACTTGAGTCCCTTCAACGACACCGGTTGATTGAAGAGGTTCAGCGATGGAAGTCTCGAAGCCGCCGGTAATTTCCCATTCGGTAAGAAGTTCCCGAAGTTTTCTTTCAATAATGGAACCTCGAAATCTTCCTTCTTGTGCTTCACGATATTGTCCTTTGCACTTATGTGAGCTCCTGGTTCCATGTGGTTCGTTGAAAAACTGGCTTGATTTGGGAAGTTAGGGTATAGACTTACGTAGCCTCTTAAGTACATCATGTCGATTAGGAACTTCTTCCATGATGCTTGCCAACCGTTTGTTCTAGATTTAGGGATCTGAACTGGATTCTCTTTTGCATTTTCCGTGTATCTTGTGTTCATGTAAACATAAAACTCCCTCCAATGTTTGGGGAAGAAAACTGCTCCCCAACTGCAGGGGAGCTGGTGGAGGTAAGGTGTGTTTGGATGAATCCGCTTGAAGAACTCTGTTGCATTCCATTTAGGTCTTTCTTTAACCACTTCGACTAGCCGAGGCGTGTAGAGGGAGATCGATGATAGCTCGGGTAGAGATATTTGTGGATCGTAGTGGTATGCTAGGAGGGCGTATTTGATCCAAAGGTAGTAGTATGGAGAGACTTCAATATCGTCTTCGAGTAGGAGTCCATAATCGTCGTCCGAAGCAGGATACCAACTCTCGCTTACAGCTCGTATCAGCCCTCCTTGGATGATTCTTCTTCTGAGGCTTTTGGGGCCATGAGGCCACTCAAAGGAGCTTACTAATTTTATAGTTTTCTCGTCGACTTTACTGTCCATGTTGAAGCTGATAGGTATCTCATCCCCTAGGTAATATGCATCTTTTAGCGACTTGAGAAGCCTTGTTAATGAGCCCGCACGGTTTTGTGTGATAATGTTGATTGAAATCCGCATCTTGTTCCAATCTGAAGGGAAAAAAAAGGATGAGAGCTCTGCTATTGCATGGCAAGAGTTTATATCAGGAGAAACTGAGAGAAAAGAGGAAGTATCTTAGCATTCTTACTTGGAAGTGCTGTTGATCGAAGATCGGCCATCCAAAGAACTTTAGAAATCGAAGGCCTTGGTAAAAGAATCACTGTTGTACTACCATTCAAGTTAGCCTCTGATGCCATTTTCAAAGCCTTCTTCACATTAGGATCAACGTCGGCCACAGTGATGACGACGCTGGGATTGTGTATTTTGATTAATCCCTTCATACTGGCATACACTGCCTGCACCACAGGGACCTCAGAATTTGATATTCCAGAGAGAGCCCCAATGGCCAAGTCGAATATCTTGAACCTCCGTTCTTTACAGACCGACTTCGGCCATTTAAGAGCAGCTGCAGCATCTTCACACGGGCAAAAGTTACCGCCAGACACTGCAATATAAGCCTTCTTTCCAACAGTGGATCTGAACTTTTCTAGAAGTGGTGCTAGTGCTTTAGCTTCATCAACAGAATGAGCATAAAATAGAGCATCTATCTTTTGAGGATACATAGCTGCCCATTGTGTGATATAACCAGTAGACATCGCCTTCCACCATTGATCATCCCGAACTTGAACAATGTCCTTAAATATGACAGTGGTCTCGGAAACGTAAGCCAGCCTGTGTTCACTGTCACCCCAAGTTTCCTTGTCTTTTGGGTCTACAGGAAGAACAAATGAGGCAGCATTTCTATACTTTTGAAGCTGATAGCTGCATATTTGGGATTAAAACAATTAGCCACCCAAAACTTAGGAGATGTTGAAATATGAGTAGTGGAAACAGCTAGTAATAAGTTACCTTAGATGGAGATCTTCTCCAGTTGCAAAGGTGAAGGGGGTTTCAATGAAAAGTGTCTTGACAAGCTCAGCGGATAAGAACCAAGAGCTCGAGAGAAAGTCGACCTGCACAATTTTATTGACGGTGATGTCATAAGCAGGATCAGGCAAGTAAAGCCCTGCTTCCTTGGATCGAAACTTCCGATAACTCGGGAATGTGAAATCCTTCTGTCGAAAGGGCAAAATCCTACCTATGCTGCCCAAAACTGCATTCTTGTATTTGTCGGTCCCTGCTACATGAGACAAAATCTGTAGCATTTTACGGCCTGGAATCATGTCATCATCAAGAATATATACTAAATCAGCTTCGGTTTGTAAGGCCATTTGGAACCGTCCATAGTACTTGAAGTCATAGCTTGAGCTAATAAAGCTAATTCTGGAGTTGTTATAGCTATCTACAATTCTTTTCAAAGAGAGCTCATTTGGGCTCCCGAAGGCAAGCACCCAAATATGGTGGAAGGGAAGGGTTTGCTGAAGCAAAGAGTTAAGTTGTGCACACAGAGTTTTCCTCTTAAAATGGTTCAAGATCACTGTAACTTTTGGCTTGTTTGGTCCTCTCAAATCCCACTTGGACTTCATTGCCATTAGCTGAGAAAGAGTCTCAGTTCCAAAGCTTTTGCTTTGAAAATCTAGAATCTCATTGTAAAGCTCTGTTTTCAACTTTATCATCTGCCCATCAGTGGACTTCTTTTGCTCAAAATCAATCTTCTCATTCTCACAAGCTTCCTCCGGAGTAATCGGTCTGAATTCCGCTTGCATCATTAGAGAAGTTGGTTCTTCGATTCGACCCACTACGTGGGGCGGTATTACGAACTGTCTCCATTGTTGAGCGATTCTTGTAGCCCAAGAGAAGTCTGGTTTGGTTCTCAAGTCTATTGCAGGGCTGACATAATACAGTAGAAATGTTGCATATAATGCGAAGGCAAACTGGAGACATGTAAGACCAGCAACAAGCTTTGTTGAAGAATTTCTTTGAGGTCTTAACTTTCCTTTTCCTCCAACATAATCATTGATCATCCCTTCTAAATAATCCCCGTTTTGTGTTGCAGGATTCCGAAAGATACCCATCTTCTTCTCAACGCAACTTCAGGACAATCGCAACCCTGTAGCATAACCGCATATCAGATACGTCCTTTTCATATGATACTGAAAAGACTGATCATCCAGACCAAGCTGAAAGTAATTTTCTTACCTTAAAACTCCCAAATATTGATATGTCGAATTCTGGACAAAAACTATCTTCCACCTGAGAAATCTGTGAACGGATACTGGAATGAGAAAGACTTATCAAGAAAGTTGAGATATGAATAAGAACAGGAACTGGGAGACTTAAAAAAGGAAGAAGCTTTTGGGTTAGTGTATACAATAGGACAGAAAGTGTGTTTGTACATGAAAAACGCACTCAATGTCACATGGGGTTGACGCTTATAATGTTAGAGTTTTTATTACAAACTGTGTCAAAAAAACGTCTTACCCTCGCTGCTTTTTGTCTTGCAATGTTAAACCCCTCAAGGAACCACTTACAAAGCCCCGGATTTGAAGCCTTGTTTTGTGCACTTCTAGACTTTCTCTCTCCTTCTAGAGTCTACTCTCTCCTTCTAGAGTCTACTTTCTCTCTTGAAAGTAATTTATAGAAGATTTTTATAAGAGTGTAACATTACCACCGAAGGTGTTTCAAACATTTTTCCCTGTTTTTTTAGAGTTTAATCGTAAGTGATGTGCGAGGGGATTTAAACTTTTGATCTCTAGAGGGGATTTAAACTTTTGATCTCTTGATTTAGTGTACGGGCTTTATGCCAATTGAACAAATATTCAAGGATATGTGTCTTATACCACTTGTCACAATCGCACTTTTTTTTGGAAACGGACTATGTGATTGTGCGGCACTCACTCCTAACACTAAGTGAGTCAAGCCAATTTGTATTCGTGTCGCTTACAGCCGAGCAACGTATGCTCAACCCTCTAGCCTCATTTGAGAAGAAGGTTTTAGAAAATGAGGTAGAGAGATTTTTGAAAGCGAGTTTGAAAGTAAGAATGAGACCAGATTTAAAAGTAACTAAGCAAAATGCCACAAAACGGCTTAAGTAACATATAACTTTTTGGACAAGGAGAATTTGAGAACTAATTGCATCCTCTTATAGTACATCTTGAGGTGATTCAGGTCTGGTAGGCCTAAACGTGATTTCACCCAACGGTCATACAAAATCAGGGGGTGTGGCAAGATATTTCTAACTTACAACCTTATAAATGAGGTAAAAGTTTATTATTAAAATTTTTAGAGGTAAATGTACTTTTAAGTTGTTAAGTATTGATTTATAGACGTGTAATTATTGAGAATTTTATATCTCTCTAGAAAAGAGTCTTATAGATATCAACCATCTATTTGTAGGTCTCTATTTTTAGAGGTTCAAGCCTACTAACTTAGCCATTCAAAATACTAAAAAGCCTCACCACAATATCCTTTGGTTAGAATTACATGCTAATCTCATAAAACACAAACCCAAATCCCTAAAAAAAGGAAGCTTTTTAGTTCAAAAGTGAAAAACAAAAGGTTAAAAAGAGTGAAAACGCCCTATTTCAAGGCAGATCTGACTGCGAAAGCAACCAAACCATGCAGGGGGGATGTCCATGGCACCATGGGAAAAAGGAATAGTTAAAAGAAAAAGGGCAAACCCAAAAAGACAACAAACAAAGAAGTAAAAAATACTTACAAAAACTTGAAGTGAAAGCAAACGATATCTTCAGCAAACAATCCAAAGCCAAGAAACCCCACAACTTGAAAAACCAGAGGCATCAAATAAAGGCTTAATATAGTAGCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAACAAAGTGTTTGACTTTTTATAGAGATACATAGAAACGTAGAGAAATGAAGTAGCAAGTTCTGGAAAATGGGATTGAGCCAAACTTTAATCTTGGCGGGCTGCTTGAATGCAAAGAATGAAGAAGAAAAAAAACAAGTGTTCATCATGTGGGTTTTCTTTTTGGTTAGGCTGTTTGTGAGTGGAGGATGATGAAGAAAAGTTTTTAGTTTTGAATATAGAAATCCAAGTGTTTGGATGAGATGCATTATCATTATTACATTTAACATATGATGAAATTGGAGCTGCAGCTTGAATGTTTTGAAACCATACAGTATTATGTTCTTACTTTTTGGGGCAAATGCACACTTTCATGGGGTTTCTTTGGACATTCTCTTTCTAAAATCCAACTAAGTTCTTAATCTCTTACCGCTCGTTTACCGCTCGTTTTGATAATGCTTTCGTTTCTTTTACGTTTTATTTTCAGATTTTGAAGAACATATGTGTTTTTTTTGTAGGACAACAAGTTTGAGGATCATCAATTACGGTTGAATTATGCTTACTTTGATAAAAACGATAGGTATTTGAGTACCTATTTCAGGGTTTGAACCTCCAATCTTGAGGGAAGAAGGCTCTTAAAGGTTCAATTTTATCTTTTGTATGTTAAGTTCTTATTCTCGGAGAAATCAAATCATTAGTTTTTAGGAAGGTAGAAAATGTTTGATGATGAAAGTCCCACATCAGCTAATTTAGTAAATGATCATGAGTTTATAATAAAAAAATACTCTCTTCATTGGTGTGAGGCCTTTTGGGAAAGCACAAAACAAAGTCATAAAAACTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGGTATCAGAGTCATGCCCTAAACTTAGTCATGCCAATAGATTGGTAAATCTTCAAATGTCGAACAAATGACTTCAAAAGAAAAAGGAGTCGAGAGCCTCAATTAAGGAGAGAGGCGTAAATTAAGGTTGAAAAAGCACTTACTAATACTCTTACAATTTTTTTTTTAAAGCTTCAAAAAAA

mRNA sequence

TGGTTGTTTTAGAGTGGCTGTGTTCGATCAGATTCCAACTCCAGTCCTTGAAATTGAATGCTGTTCTTATTAAGACGATCAGATTATATCAACCAAATTATCAACGGAGAGATGAAATTCAGCTAACCTATTACAGAAATGAATCGTTGAAAAGAAGCAAAGAATCATGGAGAACGAATCAGAATTTTGCACAGTGCGAAGGCAGACCAGTCTCATGGTTCACCGCTACAATCTCAGAAACTTCACATTTCAGCACATCTTGCCCTAGCTTGGCTCCGGCGGACTTGAGTCCCTTCAACGACACCGGTTGATTGAAGAGGTTCAGCGATGGAAGTCTCGAAGCCGCCGGTAATTTCCCATTCGGTAAGAAGTTCCCGAAGTTTTCTTTCAATAATGGAACCTCGAAATCTTCCTTCTTGTGCTTCACGATATTGTCCTTTGCACTTATGTGAGCTCCTGGTTCCATGTGGTTCGTTGAAAAACTGGCTTGATTTGGGAAGTTAGGGTATAGACTTACGTAGCCTCTTAAGTACATCATGTCGATTAGGAACTTCTTCCATGATGCTTGCCAACCGTTTGTTCTAGATTTAGGGATCTGAACTGGATTCTCTTTTGCATTTTCCGTGTATCTTGTGTTCATGTAAACATAAAACTCCCTCCAATGTTTGGGGAAGAAAACTGCTCCCCAACTGCAGGGGAGCTGGTGGAGGTAAGGTGTGTTTGGATGAATCCGCTTGAAGAACTCTGTTGCATTCCATTTAGGTCTTTCTTTAACCACTTCGACTAGCCGAGGCGTGTAGAGGGAGATCGATGATAGCTCGGGTAGAGATATTTGTGGATCGTAGTGGTATGCTAGGAGGGCGTATTTGATCCAAAGGTAGTAGTATGGAGAGACTTCAATATCGTCTTCGAGTAGGAGTCCATAATCGTCGTCCGAAGCAGGATACCAACTCTCGCTTACAGCTCGTATCAGCCCTCCTTGGATGATTCTTCTTCTGAGGCTTTTGGGGCCATGAGGCCACTCAAAGGAGCTTACTAATTTTATAGTTTTCTCGTCGACTTTACTGTCCATGTTGAAGCTGATAGGTATCTCATCCCCTAGGTAATATGCATCTTTTAGCGACTTGAGAAGCCTTGTTAATGAGCCCGCACGGTTTTGTGTGATAATGTTGATTGAAATCCGCATCTTGTTCCAATCTGAAGGGAAAAAAAAGGATGAGAGCTCTGCTATTGCATGGCAAGAGTTTATATCAGGAGAAACTGAGAGAAAAGAGGAAGTATCTTAGCATTCTTACTTGGAAGTGCTGTTGATCGAAGATCGGCCATCCAAAGAACTTTAGAAATCGAAGGCCTTGGTAAAAGAATCACTGTTGTACTACCATTCAAGTTAGCCTCTGATGCCATTTTCAAAGCCTTCTTCACATTAGGATCAACGTCGGCCACAGTGATGACGACGCTGGGATTGTGTATTTTGATTAATCCCTTCATACTGGCATACACTGCCTGCACCACAGGGACCTCAGAATTTGATATTCCAGAGAGAGCCCCAATGGCCAAGTCGAATATCTTGAACCTCCGTTCTTTACAGACCGACTTCGGCCATTTAAGAGCAGCTGCAGCATCTTCACACGGGCAAAAGTTACCGCCAGACACTGCAATATAAGCCTTCTTTCCAACAGTGGATCTGAACTTTTCTAGAAGTGGTGCTAGTGCTTTAGCTTCATCAACAGAATGAGCATAAAATAGAGCATCTATCTTTTGAGGATACATAGCTGCCCATTGTGTGATATAACCAGTAGACATCGCCTTCCACCATTGATCATCCCGAACTTGAACAATGTCCTTAAATATGACAGTGGTCTCGGAAACGTAAGCCAGCCTGTGTTCACTGTCACCCCAAGTTTCCTTGTCTTTTGGGTCTACAGGAAGAACAAATGAGGCAGCATTTCTATACTTTTGAAGCTGATAGCTGCATATTTGGGATTAAAACAATTAGCCACCCAAAACTTAGGAGATGTTGAAATATGAGTAGTGGAAACAGCTAGTAATAAGTTACCTTAGATGGAGATCTTCTCCAGTTGCAAAGGTGAAGGGGGTTTCAATGAAAAGTGTCTTGACAAGCTCAGCGGATAAGAACCAAGAGCTCGAGAGAAAGTCGACCTGCACAATTTTATTGACGGTGATGTCATAAGCAGGATCAGGCAAGTAAAGCCCTGCTTCCTTGGATCGAAACTTCCGATAACTCGGGAATGTGAAATCCTTCTGTCGAAAGGGCAAAATCCTACCTATGCTGCCCAAAACTGCATTCTTGTATTTGTCGGTCCCTGCTACATGAGACAAAATCTGTAGCATTTTACGGCCTGGAATCATGTCATCATCAAGAATATATACTAAATCAGCTTCGGTTTGTAAGGCCATTTGGAACCGTCCATAGTACTTGAAGTCATAGCTTGAGCTAATAAAGCTAATTCTGGAGTTGTTATAGCTATCTACAATTCTTTTCAAAGAGAGCTCATTTGGGCTCCCGAAGGCAAGCACCCAAATATGGTGGAAGGGAAGGGTTTGCTGAAGCAAAGAGTTAAGTTGTGCACACAGAGTTTTCCTCTTAAAATGGTTCAAGATCACTGTAACTTTTGGCTTGTTTGGTCCTCTCAAATCCCACTTGGACTTCATTGCCATTAGCTGAGAAAGAGTCTCAGTTCCAAAGCTTTTGCTTTGAAAATCTAGAATCTCATTGTAAAGCTCTGTTTTCAACTTTATCATCTGCCCATCAGTGGACTTCTTTTGCTCAAAATCAATCTTCTCATTCTCACAAGCTTCCTCCGGAGTAATCGGTCTGAATTCCGCTTGCATCATTAGAGAAGTTGGTTCTTCGATTCGACCCACTACGTGGGGCGGTATTACGAACTGTCTCCATTGTTGAGCGATTCTTGTAGCCCAAGAGAAGTCTGGTTTGGTTCTCAAGTCTATTGCAGGGCTGACATAATACAGTAGAAATGTTGCATATAATGCGAAGGCAAACTGGAGACATGATTCCGAAAGATACCCATCTTCTTCTCAACGCAACTTCAGGACAATCGCAACCCTGTAGCATAACCGCATATCAGATACGTCCTTTTCATATGATACTGAAAAGACTGATCATCCAGACCAAGCTGAAAGACAACAAGTTTGAGGATCATCAATTACGGTTGAATTATGCTTACTTTGATAAAAACGATAGGTATTTGAGTACCTATTTCAGGGTTTGAACCTCCAATCTTGAGGGAAGAAGGCTCTTAAAGGTTCAATTTTATCTTTTGTATGTTAAGTTCTTATTCTCGGAGAAATCAAATCATTAGTTTTTAGGAAGGTAGAAAATGTTTGATGATGAAAGTCCCACATCAGCTAATTTAGTAAATGATCATGAGTTTATAATAAAAAAATACTCTCTTCATTGGTGTGAGGCCTTTTGGGAAAGCACAAAACAAAGTCATAAAAACTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGGTATCAGAGTCATGCCCTAAACTTAGTCATGCCAATAGATTGGTAAATCTTCAAATGTCGAACAAATGACTTCAAAAGAAAAAGGAGTCGAGAGCCTCAATTAAGGAGAGAGGCGTAAATTAAGGTTGAAAAAGCACTTACTAATACTCTTACAATTTTTTTTTTAAAGCTTCAAAAAAA

Coding sequence (CDS)

ATGTTGCATATAATGCGAAGGCAAACTGGAGACATGATTCCGAAAGATACCCATCTTCTTCTCAACGCAACTTCAGGACAATCGCAACCCTGTAGCATAACCGCATATCAGATACGTCCTTTTCATATGATACTGAAAAGACTGATCATCCAGACCAAGCTGAAAGACAACAAGTTTGAGGATCATCAATTACGGTTGAATTATGCTTACTTTGATAAAAACGATAGGTATTTGAGTACCTATTTCAGGGTTTGA

Protein sequence

MLHIMRRQTGDMIPKDTHLLLNATSGQSQPCSITAYQIRPFHMILKRLIIQTKLKDNKFEDHQLRLNYAYFDKNDRYLSTYFRV
Homology
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BLAST of CmaCh13G002490 vs. NCBI nr
Match: KAG6583576.1 (hypothetical protein SDJN03_19508, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0 

Query: 1  MLHIMRRQTGDMIPKDTHLLLNATSGQSQPCSITAYQIRPFHMILKRLIIQTKLK 56
          MLHIMRRQTGDMIPKDTHLLLNATS QSQPCS TAYQIRPFHMILKRLIIQT+LK
Sbjct: 1  MLHIMRRQTGDMIPKDTHLLLNATSEQSQPCSKTAYQIRPFHMILKRLIIQTELK 55

The following BLAST results are available for this feature:
BLAST of CmaCh13G002490 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh13G002490 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh13G002490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583576.11.3e-1994.55hypothetical protein SDJN03_19508, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh13G002490 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G002490.1CmaCh13G002490.1mRNA