CmaCh11G016400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G016400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Non-specific lipid-transfer protein-like protein
Location	Cma_Chr11: 10790703 .. 10791611 (-)
RNA-Seq Expression	CmaCh11G016400
Synteny	CmaCh11G016400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCCACTTTCCATCTCTTTTTCTTCCCTAGAAATGGCCACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCTCTCTGGTCGTGAATTACTCCACCGCATACGGCGCCCTAGTGCCGGAGAGGGACTGTTCCAAACTCATCATCACCTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTGTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCATTCGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGACTGTAAATGTAAGCCTAATTTCTCCAAAATCGCTCTCTTAATTTCCGATTCAGTAAAACCCTAGAAAACCTAACTGATCTGTTTTTGTGAAATCGCTGTTTCCTTTTGATTTCCAGTGTCGACTTCTCCTATTGGCTCTCCTGGTACTGTTTCTTCTCTGAAACGATTTTCGATTAGTCTTACTCTGTTGATTTCGATCTGGATTTTGGAATGTTTGTGATAAAATTCCTGAGCGTTTGTTCTGTTTCGATTGTTGTTTTAATGCAGCGGTTACGCCGGCTGCCTCACCTAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTATGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGAGTGGAAAGCGTTTGAAAAATTTGGGGGAATTTGAAAATTGTTTTAGTGTTTATTCGCGGAAGGGAGTTTGTTAGGACTGTTGGATTTTGTTGTTTCTTTTGTGGCAAGGTGTTCT

mRNA sequence

TTCTCCACTTTCCATCTCTTTTTCTTCCCTAGAAATGGCCACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCTCTCTGGTCGTGAATTACTCCACCGCATACGGCGCCCTAGTGCCGGAGAGGGACTGTTCCAAACTCATCATCACCTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTGTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCATTCGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGACTGTAAATTGTCGACTTCTCCTATTGGCTCTCCTGCGGTTACGCCGGCTGCCTCACCTAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTATGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGAGTGGAAAGCGTTTGAAAAATTTGGGGGAATTTGAAAATTGTTTTAGTGTTTATTCGCGGAAGGGAGTTTGTTAGGACTGTTGGATTTTGTTGTTTCTTTTGTGGCAAGGTGTTCT

Coding sequence (CDS)

ATGGCCACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCTCTCTGGTCGTGAATTACTCCACCGCATACGGCGCCCTAGTGCCGGAGAGGGACTGTTCCAAACTCATCATCACCTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTGTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCATTCGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGACTGTAAATTGTCGACTTCTCCTATTGGCTCTCCTGCGGTTACGCCGGCTGCCTCACCTAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTATGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGA

Protein sequence

MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF

Homology

[Close]

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-22
Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = 0


Query: 6   LSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLK 65
           LS+S  ++     +++T   A  P  DCS LI+ +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTP 125
            V KA++ CLC  FK+SAS G+ LN+TKA +LPAAC +  P+++ C LS        V P
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLS--------VAP 138

Query: 126 AASPKLSPGEAPVKNET----TPAPTPENSAATGVMVSVGSIIAAIGVGVFYS 175
           + +P L+PG A    ET     P P+  N  ++ +  S  ++++A+   +F+S
Sbjct: 139 STAPGLAPGVAAAGPETAGFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLFFS 180

[Close]

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 9   SLFALFSLVVNYS--TAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKI 68
           ++  +FS+V   S   A+ A+    DCS LI+ +ADCL FV+  ST   P   CC GLK 
Sbjct: 5   TILMIFSVVALMSGERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 64

Query: 69  VAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTS---PIGSPAV 128
           V +   +CLC  FKNS S G+ L+++KA SLP+ C ++ P  + C LS S   P  +P +
Sbjct: 65  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGL 124

Query: 129 TP---AASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFY 174
           +P   A +P LS G     N  TP  +P +S A+ + VS   +I    +  FY
Sbjct: 125 SPTAGAGAPALSSG----ANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 32  DCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKIVAKANADCLCHTFKNSASFGIVLNV 91
           DCS +I ++ DCL F++  ST  +P K CCVG+K V   +  CLC   ++S   G VL+ 
Sbjct: 44  DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103

Query: 92  TKALSLPAACDISDPALSDCKLSTSPIGSPAVTPAASPKLSPGEAPVKNETTPAPTPENS 151
           TKAL++P  C++  P   +C +ST    +P   P  SP  SP  A      +PA TP + 
Sbjct: 104 TKALAMPKICNV--PIDPNCDVSTPAASTPVSPPVESPTTSPSSA-----KSPAITPSSP 159

Query: 152 AAT 155
           A +
Sbjct: 164 AVS 159

[Close]

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 0


Query: 12  ALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKIVAKAN 71
           +L  LV++ S+ Y  +    DC  L+ITL  CLPF+S   T  TP  +CC  LK +    
Sbjct: 9   SLLLLVLSVSSPY--VHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTK 68

Query: 72  ADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTPAASPKL 131
             CLC   K  A  GI LNVTK+ +LP AC ++ P +S C             P ASP  
Sbjct: 69  PICLCEGLK-KAPLGIKLNVTKSATLPVACKLNAPPVSACD----------SLPPASPPT 128

Query: 132 SPGEAPV-KNETTPAPTPENSAATGVMVSVGSIIAAIGVGVF 173
           + G+APV  +   PAP+P    +  + +S  S +    + +F
Sbjct: 129 ANGQAPVWGSGWAPAPSPSKGNSL-IPISGFSFVIVTALAMF 156

[Close]

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10
Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 32  DCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKIVAKANADCLCHTFKNSASFGIVLNV 91
           DCS +I ++ DCL ++   S  T P K+CC G++ V + N  C+C    ++   GI LN 
Sbjct: 47  DCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNS 106

Query: 92  TKALSLPAACDISDPALSDCKLSTSPIGSPAVTP----AASPKLSPGEA--PVKNETTP- 151
           T+AL+ P AC +S  A   C + TS   +P  +P    A +P  SP  A  P  + T+P 
Sbjct: 107 TRALATPKACKLS-IAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSPETSATSPS 166

Query: 152 --------APTPENSAATGVMVSVGSIIAAIGVGVFY 174
                   AP+P +S    + V   +I+  I   V Y
Sbjct: 167 SDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSVAY 202

[Close]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL
Match: A0A6J1JIP6 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF
Sbjct: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL
Match: A0A6J1JEH5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.0e-85
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           P VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF
Sbjct: 121 P-VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL
Match: A0A6J1EIQ5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.2e-82
Identity = 166/175 (94.86%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CKLSTSPIGS
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL
Match: A0A6J1EM83 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.0e-80
Identity = 165/175 (94.29%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CKLSTSPIGS
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           P VTPAASPKLSPGEAPVKNETTPAPTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 121 P-VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL
Match: A0A6J1HGE8 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111464062 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.8e-46
Identity = 113/178 (63.48%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MATAKLSISLFAL--FSLVVN-YSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPA 60
           MATAKL ++LFAL  FSL ++  S A+ A  P  DCS LI+ +ADCL FVS DSTTT P 
Sbjct: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  KACCVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSP 120
            +CC GLK V KA+ADCLC  FKNSA  G+VLNVTKALSLPAAC +S PA S+CKLS SP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 IGSPAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
            GSPA+ PA SPK     AP  NE T AP P  SAATG MVSVGS+I AIGV +  SF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178

[Close]

BLAST of CmaCh11G016400 vs. NCBI nr
Match: XP_022988971.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF
Sbjct: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of CmaCh11G016400 vs. NCBI nr
Match: XP_022988972.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 1.9e-84
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           P VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF
Sbjct: 121 P-VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of CmaCh11G016400 vs. NCBI nr
Match: XP_022927861.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita moschata] >KAG6588780.1 Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.9 bits (803), Expect = 8.6e-82
Identity = 166/175 (94.86%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CKLSTSPIGS
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of CmaCh11G016400 vs. NCBI nr
Match: XP_023531692.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 3.6e-80
Identity = 162/175 (92.57%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALF+LV NYS AYGALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           C+GLKIVAKANADCLCHTFK SAS GIVLNVTKALSLPAACDISDPALS+CKLSTSPIGS
Sbjct: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           PAVTPAASPKLSPGEAPVKNETTPAPTPE SAATGVM SVGSI+AAIGVGVFYSF
Sbjct: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPETSAATGVMASVGSIVAAIGVGVFYSF 175

[Close]

BLAST of CmaCh11G016400 vs. NCBI nr
Match: XP_022927863.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 6.2e-80
Identity = 165/175 (94.29%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGS 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CKLSTSPIGS
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTSPIGS 120

Query: 121 PAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYSF 176
           P VTPAASPKLSPGEAPVKNETTPAPTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 121 P-VTPAASPKLSPGEAPVKNETTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of CmaCh11G016400 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.3e-23
Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = 0


Query: 6   LSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLK 65
           LS+S  ++     +++T   A  P  DCS LI+ +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTP 125
            V KA++ CLC  FK+SAS G+ LN+TKA +LPAAC +  P+++ C LS        V P
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLS--------VAP 138

Query: 126 AASPKLSPGEAPVKNET----TPAPTPENSAATGVMVSVGSIIAAIGVGVFYS 175
           + +P L+PG A    ET     P P+  N  ++ +  S  ++++A+   +F+S
Sbjct: 139 STAPGLAPGVAAAGPETAGFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLFFS 180

[Close]

BLAST of CmaCh11G016400 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-22
Identity = 64/169 (37.87%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 6   LSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLK 65
           LS+S  ++     +++T   A  P  DCS LI+ +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTP 125
            V KA++ CLC  FK+SAS G+ LN+TKA +LPAAC +  P+++ C LS +P  +P V  
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGVA- 138

Query: 126 AASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFYS 175
           AA P+ +           P P+  N  ++ +  S  ++++A+   +F+S
Sbjct: 139 AAGPETA-------GFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLFFS 176

[Close]

BLAST of CmaCh11G016400 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-20
Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 9   SLFALFSLVVNYS--TAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKI 68
           ++  +FS+V   S   A+ A+    DCS LI+ +ADCL FV+  ST   P   CC GLK 
Sbjct: 5   TILMIFSVVALMSGERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 64

Query: 69  VAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTS---PIGSPAV 128
           V +   +CLC  FKNS S G+ L+++KA SLP+ C ++ P  + C LS S   P  +P +
Sbjct: 65  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGL 124

Query: 129 TP---AASPKLSPGEAPVKNETTPAPTPENSAATGVMVSVGSIIAAIGVGVFY 174
           +P   A +P LS G     N  TP  +P +S A+ + VS   +I    +  FY
Sbjct: 125 SPTAGAGAPALSSG----ANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]

BLAST of CmaCh11G016400 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 9   SLFALFSLVVNYS--TAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKI 68
           ++  +FS+V   S   A+ A+    DCS LI+ +ADCL FV+  ST   P   CC GLK 
Sbjct: 5   TILMIFSVVALMSGERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 64

Query: 69  VAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTSPIGSPAVTPA 128
           V +   +CLC  FKNS S G+ L+++KA SLP+ C ++ P  + C LS S  G P   PA
Sbjct: 65  VVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVS--GDP---PA 118

Query: 129 ASP 130
            +P
Sbjct: 125 TAP 118

[Close]

BLAST of CmaCh11G016400 vs. TAIR 10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 32  DCSKLIITLADCLPFVSKDSTTTTPAKACCVGLKIVAKANADCLCHTFKNSASFGIVLNV 91
           DCS +I ++ DCL F++  ST  +P K CCVG+K V   +  CLC   ++S   G VL+ 
Sbjct: 44  DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103

Query: 92  TKALSLPAACDISDPALSDCKLSTSPIGSPAVTPAASPKLSPGEAPVKNETTPAPTPENS 151
           TKAL++P  C++  P   +C +ST    +P   P  SP  SP  A      +PA TP + 
Sbjct: 104 TKALAMPKICNV--PIDPNCDVSTPAASTPVSPPVESPTTSPSSA-----KSPAITPSSP 159

Query: 152 AAT 155
           A +
Sbjct: 164 AVS 159

The following BLAST results are available for this feature:

BLAST of CmaCh11G016400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI9	6.1e-22	38.73	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	3.7e-19	38.15	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE60	1.6e-14	38.21	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]
Q9FY78	2.0e-12	35.19	Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	1.8e-10	33.12	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CmaCh11G016400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIP6	1.3e-86	100.00	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1JEH5	9.0e-85	99.43	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1EIQ5	4.2e-82	94.86	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1EM83	3.0e-80	94.29	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1HGE8	4.8e-46	63.48	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata...	[more]

BLAST of CmaCh11G016400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988971.1	2.6e-86	100.00	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_022988972.1	1.9e-84	99.43	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]
XP_022927861.1	8.6e-82	94.86	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_023531692.1	3.6e-80	92.57	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_022927863.1	6.2e-80	94.29	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]

BLAST of CmaCh11G016400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64080.1	4.3e-23	38.73	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.2	4.8e-22	37.87	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	2.6e-20	38.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	1.6e-17	42.28	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G36150.1	1.1e-15	38.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 88..105 score: 33.42 coord: 55..69 score: 30.97 coord: 32..48 score: 24.62
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..111 e-value: 0.0029 score: 26.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 21..111 e-value: 3.9E-13 score: 49.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..108 e-value: 2.4E-16 score: 61.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..151
None	No IPR available	PANTHER	PTHR33044:SF181	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 9..168
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..103 e-value: 3.57226E-13 score: 59.3627
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 9..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G016400.1	CmaCh11G016400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding