CmaCh11G015410 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G015410
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
LocationCma_Chr11: 10044223 .. 10046825 (+)
RNA-Seq ExpressionCmaCh11G015410
SyntenyCmaCh11G015410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATTTCTTCTTCTTCTTCTTCTTCTTCTTCAATTTCCTCCATCTCCATTTCCATTTCCAAGGAAATTATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGTGAGATCCCTTCTTCTTCTGATTTCCCTTCTTCCATTTTCATTCCATCTCATTCTTTCTTCTCTTTGTAGGATACCCTCCGCCGCAGCCTGGTTACCCCGGCAATCCTCCGCCGCCGCATCAAGGCTATCAAGAGTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCTGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATAACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGTACGTTTTCCCCCATTGCTTTAATTTCTGTATGGTTATTACTCTGCGGATGATCATTTTCTTGATTAATTGATTGATTGATTCTGTTTTGTGTAAATTGCTTGGATTTGAAGATATGAATGTTTGTGGAATTATTTGGATTTTTAGTTTAGGAATTCGATCAGTTTTGAACTTTTTCTTGTTAACAAATGATTGTTAGATCAATTTAAGTATCAATTGATTTAATTTAACATTTCTAATTTGTTCGAAGGGGCAATTTTGAACCAATGCTTTATTGTTCTTGTTATCATGAACTAAGCTGCATTTTTCTTTGTTTAGGAAGAAAAGGAGAATGGTAAATTGATGAATTGGATGGTTTTTTAGTTAAGTTATGGATGGAAGAACTTGACAATCTCGTTCTCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGGATAGAGTCATTTGGCACACTTGTTTTATAGGTTTTTATAGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGACGGTTTTTTAGTTAAGTTATGGATGGAAGAACTTGACAATCTCGTTCTCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGGATAGAGTCATTTGGCACACTTGTTTTATAGGTTTTTATAGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCGAGTGTTTGAGAGGGAATAGGTTTTTATAGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGACGGTTTTGTAGTTAAGTTATGGATGGAAGAACTTGACAATCTCGTTCTCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGGATAGAGTCATTTGGCACACTTGTTTTATAGGTTTTTATAGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGACGGTTTTGTAGTTAAGTTATGGATGGAAGAACTTGACAATCTCGTTCTCGTTCTTGCTTTCGGGATTTTCTTGGAACGTAAAAGAGATTTTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGAGATGAGTCATTTGGAACACTTGTTTTATAGGTTTTTATGGTTCGATATTTGGCTCGAGAGGAACAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGACGGTTTTTTAGTTAAGTTATGGATGGAAGAACTTGACAATCTCGTTCTCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGTAGGAACTAAGTTCTTTTGAATCCACCCTTTCAAGTTTGGGATAGAGTCATTTGGAACACTTGTTTTATTGGTTTTTATGGTCCGGTATTTGGCTCGAGAGAAACAATAGAATTTTTCGAGTGTTTGAGAGGTCGAGGTGTGGGATATGGTTAGATTTAACTCTCCTTCATCTAACCATAGTATGCATTTATTAAGTAATGATTCTTGGTCTTGGTTCCGTTCGTCAAAGGTCCCTATTTTTTGTTTCAATTTTTCCCGGTTTATTAGAACCGTTTTTTGGTTTATTACATAAGTAGTGAACAAGTTCAATACATTTATAATTTATAAATTTTCTCGTGCACGATATGGCCGAAGAAACCCACTCTCCTTCGAGTGTGTTTTGTCGGTTTCCTACTCGTTGTCATTTTGCGTAGAACTTGGAGGATGCTTCCTTTTTGGGTTCTTTAAGGTTTAATCAATGTTTCTTTTTCAAAAAGAACAAGAAGAACATTTAACTATGGATAATTTTCTTAGCAGAGCTTATTATATGCCATTTTCCTCCTCCGTTTTGCAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCTTGTTTTCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGCGTTCGTGTCTATGATTATGAAGCAGTGCGGGTTTTCGAGTCGCTTGAAATAA

mRNA sequence

TTAATTTCTTCTTCTTCTTCTTCTTCTTCTTCAATTTCCTCCATCTCCATTTCCATTTCCAAGGAAATTATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTACCCCGGCAATCCTCCGCCGCCGCATCAAGGCTATCAAGAGTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCTGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATAACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGAGCTTATTATATGCCATTTTCCTCCTCCGTTTTGCAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCTTGTTTTCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGCGTTCGTGTCTATGATTATGAAGCAGTGCGGGTTTTCGAGTCGCTTGAAATAA

Coding sequence (CDS)

ATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTACCCCGGCAATCCTCCGCCGCCGCATCAAGGCTATCAAGAGTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCTGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATAACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGA

Protein sequence

MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPPPPPYHHQHYNYDDRDECSSFLRG
Homology
BLAST of CmaCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1JGP0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486738 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60
          MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP
Sbjct: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60

Query: 61 PPPYHHQHYNYDDRDECSSFLRG 84
          PPPYHHQHYNYDDRDECSSFLRG
Sbjct: 61 PPPYHHQHYNYDDRDECSSFLRG 83

BLAST of CmaCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1EL88 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111435344 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.8e-42
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60
          MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPP
Sbjct: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPP 60

Query: 61 PPPYHHQHYNYDDRDECSSFLRG 84
          PPPYHHQHY+YDDRDECSSFLRG
Sbjct: 61 PPPYHHQHYHYDDRDECSSFLRG 83

BLAST of CmaCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQEYFYDGYQPSAPLPPPPP 60
          M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPP
Sbjct: 1  MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPP 60

Query: 61 GPPPPPYHHQHYNYDDRDECSSFLRG 84
          GPPPPPY HQHY+YDDR++CSSFL G
Sbjct: 61 GPPPPPYCHQHYHYDDRNDCSSFLHG 86

BLAST of CmaCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQEYFYDGYQPSAPLPPPPP 60
          M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPP
Sbjct: 1  MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPP 60

Query: 61 GPPPPPYHHQHYNYDDRDECSSFLRG 84
          GPPPPPY HQHY+YDDR++CSSFL G
Sbjct: 61 GPPPPPYCHQHYHYDDRNDCSSFLHG 86

BLAST of CmaCh11G015410 vs. ExPASy TrEMBL
Match: A0A5A7VHS2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00060 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-29
Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 0

Query: 1   MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQEYFYDGYQPSAPLPPPPP 60
           MSY Y ++H PPETYPPPGYPPPQPGYPG+   PPPPHQGYQ YFYDGYQPSA    PPP
Sbjct: 48  MSYSYGYNHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA----PPP 107

Query: 61  GPPPPPYHHQHYNYDDRDECSSFLRG 84
            PPPPPYHHQHY+YDDR++CSSFL G
Sbjct: 108 PPPPPPYHHQHYHYDDRNDCSSFLHG 129

BLAST of CmaCh11G015410 vs. NCBI nr
Match: XP_022989747.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60
          MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP
Sbjct: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60

Query: 61 PPPYHHQHYNYDDRDECSSFLRG 84
          PPPYHHQHYNYDDRDECSSFLRG
Sbjct: 61 PPPYHHQHYNYDDRDECSSFLRG 83

BLAST of CmaCh11G015410 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60
          MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPP
Sbjct: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPP 60

Query: 61 PPPYHHQHYNYDDRDECSSFLRG 84
          PPPYHHQHY+YDDRDECSSFLRG
Sbjct: 61 PPPYHHQHYHYDDRDECSSFLRG 83

BLAST of CmaCh11G015410 vs. NCBI nr
Match: XP_022928579.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_023529271.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG6588871.1 hypothetical protein SDJN03_17436, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQEYFYDGYQPSAPLPPPPPGPP 60
          MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPP
Sbjct: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPP 60

Query: 61 PPPYHHQHYNYDDRDECSSFLRG 84
          PPPYHHQHY+YDDRDECSSFLRG
Sbjct: 61 PPPYHHQHYHYDDRDECSSFLRG 83

BLAST of CmaCh11G015410 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQEYFYDGYQPSAPLPPPPP 60
          M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPP
Sbjct: 1  MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPP 60

Query: 61 GPPPPPYHHQHYNYDDRDECSSFLRG 84
          GPPPPPY HQHY+YDDR++CSSFL G
Sbjct: 61 GPPPPPYCHQHYHYDDRNDCSSFLHG 86

BLAST of CmaCh11G015410 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30
Identity = 68/89 (76.40%), Postives = 74/89 (83.15%), Query Frame = 0

Query: 1  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN------PPPPHQGYQEYFYDGYQPSAPLPP 60
          M+YPY + H PPETYPPPGY PPQPGYPG+      PPPPHQGYQ YFYDGY PSAP PP
Sbjct: 1  MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPPPPHQGYQGYFYDGYSPSAPPPP 60

Query: 61 PPPGPPPPPYHHQHYNYDDRDECSSFLRG 84
          PPPGPPPPPY HQHY+YDDR++CSSFL G
Sbjct: 61 PPPGPPPPPYCHQHYHYDDRNDCSSFLHG 89

BLAST of CmaCh11G015410 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07
Identity = 45/112 (40.18%), Postives = 52/112 (46.43%), Query Frame = 0

Query: 6   SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQGY-QEYFYDGYQPSAPLP- 65
           S+   PPE+YPPPGY    P PGYP  PPPP        H+GY     Y GY P +  P 
Sbjct: 2   SYDRVPPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGYPPPSSRPY 61

Query: 66  ------------------PPPPGPPPPPY---HHQHYNYDDRDE-CSSFLRG 84
                              PPP PPP  Y   HH H++Y D D  C SF+RG
Sbjct: 62  EGGYQGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRG 113

BLAST of CmaCh11G015410 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07
Identity = 45/112 (40.18%), Postives = 52/112 (46.43%), Query Frame = 0

Query: 6   SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQGY-QEYFYDGYQPSAPLP- 65
           S+   PPE+YPPPGY    P PGYP  PPPP        H+GY     Y GY P +  P 
Sbjct: 2   SYDRVPPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGYPPPSSRPY 61

Query: 66  ------------------PPPPGPPPPPY---HHQHYNYDDRDE-CSSFLRG 84
                              PPP PPP  Y   HH H++Y D D  C SF+RG
Sbjct: 62  EGGYQGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRG 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JGP06.9e-43100.00cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita... [more]
A0A6J1EL885.8e-4297.59cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita... [more]
A0A6J1J3136.0e-3179.07cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita... [more]
A0A6J1F1N06.0e-3179.07cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita... [more]
A0A5A7VHS23.3e-2977.91Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo... [more]
Match NameE-valueIdentityDescription
XP_022989747.11.4e-42100.00cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m... [more]
KAG7022631.11.2e-4197.59hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022928579.11.2e-4197.59cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m... [more]
XP_022934109.11.2e-3079.07cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m... [more]
KAG6581126.12.8e-3076.40hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT1G12810.12.1e-0740.18proline-rich family protein [more]
AT1G12810.22.1e-0740.18proline-rich family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G015410.1CmaCh11G015410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane