CmaCh11G005940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G005940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionleucine-rich repeat extensin-like protein 4
LocationCma_Chr11: 2842285 .. 2843856 (+)
RNA-Seq ExpressionCmaCh11G005940
SyntenyCmaCh11G005940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATGAGTTGGTGGGGCCATTACCGGAGACCTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTTTCTGGGAACATTCCGGGGAGTATTTGTGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCTGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGGCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCATCTGTTACGCCTTCTTCTCCGTTTTCTCCTCCGGTTGTTTCGCCCTCTTCACCTCCGTCACCGGTGGCGCCGTCGTCACCTCCGTCTTTCCCATCACCAGTGGCGCCATCATCACCTCCGTCGCCGTCTCAGTCTCCGAGTACACCGACGGAACCGCCATTGTCGCCCCATTATCCTCCTCTATCGCCACCGCCGTCGCCTTCATCTTCGACTACACCTACAACCCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCGCATCAAGGTCATTCTCCGCCGTCACTACCCTCACCTTCTTCGCCACCTCTAGGTCATACTCCTCCATCTGAGCCCTCACAACAATCGCCACCTCACAGTCATACCCCCCCAACTCCACCTTCACCAACCAAGCCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAACCCATACTCCGCTAGCTCCACCTTCACCGACCGAGCCCTCTCCTTCCTCGCCGCCATATGTCCACATTCCCCCGGCTGAGCCTTCTCCTCCTGGAATATCAGCACCGCCATTCCCAGTTTACACTCCGCCTCCACCACATTTCCCTGATTTTCCTTCGCCGCCAAATACCCAACCTCCAGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTATCACTTCACCTCCCCGCCACCGCCACCACCTGTTTATCCCGCACCCCCTGTCCATACGTCGCCGTCCCCGCTCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACACCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCGCCGCTATCTCCCTCACCCCCACCTCCAGTGGTTTACGAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTGTATTAA

mRNA sequence

ATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATGAGTTGGTGGGGCCATTACCGGAGACCTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTTTCTGGGAACATTCCGGGGAGTATTTGTGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCTGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGGCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCATCTGTTACGCCTTCTTCTCCGTTTTCTCCTCCGGTTGTTTCGCCCTCTTCACCTCCGTCACCGGTGGCGCCGTCGTCACCTCCGTCTTTCCCATCACCAGTGGCGCCATCATCACCTCCGTCGCCGTCTCAGTCTCCGAGTACACCGACGGAACCGCCATTGTCGCCCCATTATCCTCCTCTATCGCCACCGCCGTCGCCTTCATCTTCGACTACACCTACAACCCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCGCATCAAGGTCATTCTCCGCCGTCACTACCCTCACCTTCTTCGCCACCTCTAGGTCATACTCCTCCATCTGAGCCCTCACAACAATCGCCACCTCACAGTCATACCCCCCCAACTCCACCTTCACCAACCAAGCCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAACCCATACTCCGCTAGCTCCACCTTCACCGACCGAGCCCTCTCCTTCCTCGCCGCCATATGTCCACATTCCCCCGGCTGAGCCTTCTCCTCCTGGAATATCAGCACCGCCATTCCCAGTTTACACTCCGCCTCCACCACATTTCCCTGATTTTCCTTCGCCGCCAAATACCCAACCTCCAGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTATCACTTCACCTCCCCGCCACCGCCACCACCTGTTTATCCCGCACCCCCTGTCCATACGTCGCCGTCCCCGCTCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACACCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCGCCGCTATCTCCCTCACCCCCACCTCCAGTGGTTTACGAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTGTATTAA

Coding sequence (CDS)

ATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATGAGTTGGTGGGGCCATTACCGGAGACCTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTTTCTGGGAACATTCCGGGGAGTATTTGTGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCTGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGGCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCATCTGTTACGCCTTCTTCTCCGTTTTCTCCTCCGGTTGTTTCGCCCTCTTCACCTCCGTCACCGGTGGCGCCGTCGTCACCTCCGTCTTTCCCATCACCAGTGGCGCCATCATCACCTCCGTCGCCGTCTCAGTCTCCGAGTACACCGACGGAACCGCCATTGTCGCCCCATTATCCTCCTCTATCGCCACCGCCGTCGCCTTCATCTTCGACTACACCTACAACCCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCGCATCAAGGTCATTCTCCGCCGTCACTACCCTCACCTTCTTCGCCACCTCTAGGTCATACTCCTCCATCTGAGCCCTCACAACAATCGCCACCTCACAGTCATACCCCCCCAACTCCACCTTCACCAACCAAGCCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAACCCATACTCCGCTAGCTCCACCTTCACCGACCGAGCCCTCTCCTTCCTCGCCGCCATATGTCCACATTCCCCCGGCTGAGCCTTCTCCTCCTGGAATATCAGCACCGCCATTCCCAGTTTACACTCCGCCTCCACCACATTTCCCTGATTTTCCTTCGCCGCCAAATACCCAACCTCCAGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTATCACTTCACCTCCCCGCCACCGCCACCACCTGTTTATCCCGCACCCCCTGTCCATACGTCGCCGTCCCCGCTCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACACCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCGCCGCTATCTCCCTCACCCCCACCTCCAGTGGTTTACGAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTGTATTAA

Protein sequence

MMNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGSICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPVDCNAFKCGGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPSTPTEPPLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAPSPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTPPTPPSPTKPSPSLPPQGHTPPGPSPSEPSPSSPPQTHTPLAPPSPTEPSPSSPPYVHIPPAEPSPPGISAPPFPVYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDYHFTSPPPPPPVYPAPPVHTSPSPLPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPPSPSPPVSVYPPLSPSPPPPVVYESPPPPPTPVYGGPLPPIYGVPYASPPPPPLY
Homology
BLAST of CmaCh11G005940 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.8e-76
Identity = 276/535 (51.59%), Postives = 326/535 (60.93%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           MNNGLNSCLP  IG LKN+TVFDVS NELVGPLPE+ G +VS+EQLNVA+N LSG IP S
Sbjct: 264 MNNGLNSCLPSDIGRLKNVTVFDVSFNELVGPLPESVGEMVSVEQLNVAHNMLSGKIPAS 323

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSN-PVDC 121
           IC LPKL+NFT+S NFF+GE P CLR+PEF DRRNCLPGRP QR  G+C +FLS  PV+C
Sbjct: 324 ICQLPKLENFTYSYNFFTGEAPVCLRLPEFDDRRNCLPGRPAQRSPGQCKAFLSRPPVNC 383

Query: 122 NAFKCGGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPSTPTE 181
            +F CG   SV+P     PPVV+P  PPS   PS PP  P+P+  S+PP+ + SP  P+ 
Sbjct: 384 GSFSCG--RSVSP----RPPVVTPLPPPS--LPSPPP--PAPIF-STPPTLT-SPPPPSP 443

Query: 182 PPLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAP 241
           PP  P Y P  PPP P    +P  P  PP  P P   SP  P  P  P  P + P P +P
Sbjct: 444 PP--PVYSPPPPPPPPPPVYSPPPPPPPP--PPPPVYSPPPPPPPPPPPPPVYSPPPPSP 503

Query: 242 SPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTP-PTPPSPTKPSPSLPPQGH 301
            P  P   +SPP  P P  PP  ++PP  P   SPP   +P PTP   T+P P  PP   
Sbjct: 504 PPPPP-PVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPP-PPHSP 563

Query: 302 TPPGPSPSEPSP---SSPPQTHTPLAPPSPTEP-SPSSPPYVHIPPAEPSPPGISAPPFP 361
            PP  SP  P P   SSPP  H+   P SP  P SP  P Y ++ P  P  P  S PP P
Sbjct: 564 PPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTP 623

Query: 362 VYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDYHFTSPPPPPPVYPAPPV 421
           VY+PPPP       PP  +PP   P   Y P PP     PP  H++SPPPPP  Y +PP 
Sbjct: 624 VYSPPPP-------PPCIEPPPPPPCIEYSPPPP-----PPVVHYSSPPPPPVYYSSPP- 683

Query: 422 HTSPSPLPLPCTKPPSPPPGAHYSEPPPPQ---SSTPSSPIHYNSPPPPP-GQYQSPPSP 481
                P P+  + PP PPP  HYS PPPP+    S P SP+HY+SPPPPP    +  P P
Sbjct: 684 -----PPPVYYSSPPPPPP-VHYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAPCEESPPP 743

Query: 482 SPPVSVYPP---LSPSPPPPVVYESPPPPPTPVYGGPLPPIYGVPYASPPPPPLY 524
           +P V   PP   +  SPPPPV+++S PPPP+P Y GPLPP+ GV YASPPPPP Y
Sbjct: 744 APVVHHSPPPPMVHHSPPPPVIHQS-PPPPSPEYEGPLPPVIGVSYASPPPPPFY 760

BLAST of CmaCh11G005940 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 3.9e-72
Identity = 295/592 (49.83%), Postives = 340/592 (57.43%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           M NG NSCLP  IG LKN+TVFD S NELVG LP + GG+VS+EQLNVA+N  SG IP +
Sbjct: 276 MENGFNSCLPSQIGRLKNVTVFDFSFNELVGSLPASIGGMVSMEQLNVAHNRFSGKIPAT 335

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLS-NPVDC 121
           IC LP+L+NFTFS NFF+GEPP CL +P F DRRNCLP RP QR  G+C +F S  PVDC
Sbjct: 336 ICQLPRLENFTFSYNFFTGEPPVCLGLPGFDDRRNCLPARPAQRSPGQCAAFSSLPPVDC 395

Query: 122 NAFKCGGSSSVTPSSPFSPPVVSP-SSPPSP-VAPSSPPSFPS-PVAPS---SPPSPSQS 181
            +F CG S+      P  P   SP  SPPSP ++PS P + PS P  PS   SPPSPS  
Sbjct: 396 GSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIV 455

Query: 182 PSTPTEPPLSPHYPPLSPP------PSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTP 241
           PS P+  P SP  PP SP         PSS TTPT   SPP  P+   P  S P++PTTP
Sbjct: 456 PSPPSTTP-SPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTP 515

Query: 242 S------SPPHFPSPSAPSPSSPHQGHSPPSLPSPS---------SPPLGHTPPS--EPS 301
           S      SP   PSP    PS P    SP S PSPS         SPP   TPP+   P 
Sbjct: 516 SPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPG 575

Query: 302 QQSPPHSHTPP--TPPSPTKPSPSLPPQGHTPP--GPSPSEPSPSS--------PPQTHT 361
           Q SPP   +PP   P  P+ PSP LPP   +PP  GP+PS P PS+        PP T  
Sbjct: 576 QNSPPIIPSPPFTGPSPPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPTPVYSPPPPSTGY 635

Query: 362 PLAPP----SPTEPSPSSPPYVHIPPAEPSPPGISAPPFPVYTPPPP--HFPDFPSPPN- 421
           P  PP    SP  P P  PP     P+ P PP  +  PFP   PPPP  ++P  PSP   
Sbjct: 636 PPPPPFTGYSPPSPPPPPPPTFSPSPSIPPPPPQTYSPFPPPPPPPPQTYYPPQPSPSQP 695

Query: 422 TQPPVY--CPRSPYP--PSPPSYS--PNPPDYHFTSP-PPPPPVYPAPPV-----HTSPS 481
            Q P+Y   P SP P  PSPP ++  P P  Y+++SP PPPPP Y  PP      + SP 
Sbjct: 696 PQSPIYGTPPPSPIPYLPSPPQFASPPPPAPYYYSSPQPPPPPHYSLPPPTPTYHYISPP 755

Query: 482 PLPLPCTKPP--SPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPPSPSPPVSVY 524
           P P P   PP  S PP   YS PPPP        +HYN PPPP   + SPP PSPPV  Y
Sbjct: 756 PPPTPIHSPPPQSHPPCIEYSPPPPP-------TVHYNPPPPPSPAHYSPP-PSPPVYYY 815

BLAST of CmaCh11G005940 vs. ExPASy Swiss-Prot
Match: O48809 (Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.0e-36
Identity = 233/565 (41.24%), Postives = 285/565 (50.44%), Query Frame = 0

Query: 1   MMNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPG 60
           + N+ L  CLPP IG LKN+TVFD+S N L GPLP + G + SLEQLNVANN  +G IP 
Sbjct: 251 LSNDNLTGCLPPQIGNLKNVTVFDISFNRLSGPLPSSIGNMKSLEQLNVANNRFTGVIPS 310

Query: 61  SICDLPKLQNFTFSNNFFSGEPPECLRV----PEFSDRRNCLPGRPMQRPSGKCNSFLSN 120
           SIC L  L+NFT+S+NFF+G+ P C+ +       +   NC+ G+  QR S +C+S  S 
Sbjct: 311 SICQLSNLENFTYSSNFFTGDAPRCVALLGDNVVVNGSMNCIDGKEDQRSSKECSSPASR 370

Query: 121 PVDCNAFKCGGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPS 180
            VDC+ F C    S  P S    P V    PP P +  SP    +P  PSS  SPS   +
Sbjct: 371 SVDCSKFGCNNFFSPPPPSFKMSPTVRVLPPPPPSSKMSPTFRATPPPPSSKMSPSFRAT 430

Query: 181 TPTEPPLSPHYPPL-SPPPSPSSSTTPTTPSSPPHFP----SPSAPSPSSPTTPTTPSSP 240
            P  PP S   P   + PP PSS  +P+  + PP  P     PS P PSS  +P+  + P
Sbjct: 431 PP--PPSSKMSPSFRATPPPPSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYP 490

Query: 241 PHFPSPSAPSPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTPPTPPSPTKPS 300
           P  P P +P P SP     PP + S   PP    PP       PP  + PPT  SP    
Sbjct: 491 P--PPPLSPPPPSP----PPPYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPP--- 550

Query: 301 PSLPPQGHTPPGPSPSEPSPSSPPQTHTPLAPPSPTEPSPSSPPYVHIPPAEPSPPGISA 360
              PP+    P P    PSPS P   +T  +PP PT  +  SPP    PP  P+   + +
Sbjct: 551 ---PPKYEQTPSPREYYPSPSPPYYQYTS-SPPPPTYYATQSPP----PPPPPTYYAVQS 610

Query: 361 PPFPVYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPP-SYSPNPPDYHFTSPPPPPPVY 420
           PP     PPP ++P   + P   P  Y P    PP PP  YSP        SPPPPPPVY
Sbjct: 611 PP----PPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVT-----QSPPPPPPVY 670

Query: 421 PAPPVHTSPSPLPL---PCTKPPSPPPGAHYSEPPPPQSSTPSSPIHY----NSPPPPPG 480
             PPV  SP P P+   P T+ P PPP  +Y   P  QS  P SP++Y     SPPPP  
Sbjct: 671 -YPPVTQSPPPSPVYYPPVTQSPPPPP-VYYL--PVTQSPPPPSPVYYPPVAKSPPPPSP 730

Query: 481 QY-----QSPPSPSPPVSVYPPLSPSPPPPVVYESPPP---------------------P 523
            Y     QSPP PS PV  +PP SP+  PP  Y+SPPP                     P
Sbjct: 731 VYYPPVTQSPPPPSTPVEYHPPASPNQSPPPEYQSPPPKGCNDSPSNDHHYQTPTPPSLP 783

BLAST of CmaCh11G005940 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.2e-34
Identity = 231/578 (39.97%), Postives = 288/578 (49.83%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           + N L+ CLP  IG+L N+TVFD SSN  VG LP T  GL ++EQ++ + N  +G +  +
Sbjct: 270 IGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDN 329

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECL----RVPEFSDRRNCLPGRPMQRPSGKCNSFLSNP 121
           IC LPKL NFTFS NFF+GE   C+    +  +F D  NCL  RP Q+ + +C   +S P
Sbjct: 330 ICKLPKLSNFTFSYNFFNGEAQSCVPGSSQEKQFDDTSNCLQNRPNQKSAKECLPVVSRP 389

Query: 122 VDCNAFKC----GGSSSVTPSSPFSPPVVSPS---SPPSPVAPS--SPPSFPSPVAPS-S 181
           VDC+  KC    GG S+ +P    +P    P    +PP+   PS   P   P P  PS  
Sbjct: 390 VDCSKDKCAGGGGGGSNPSPKPTPTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPK 449

Query: 182 PPSPSQSPSTPTEP------PLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSS 241
           P +PS  PS P EP        SP      P P      +P   +  P  P P   SP  
Sbjct: 450 PETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQ 509

Query: 242 PTTPTTPSSPPHFPSP------SAPSPSSPHQGHSPPSLPSPSSPPLGHTP-PSEPSQQS 301
            ++   P  P   P P       +P P  P Q    P       PP   TP P E  +  
Sbjct: 510 ESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQ 569

Query: 302 PPHSHTP-------PTPPSPTKPSPSLPPQGHTPP--GPSPSEPSPSSPPQTHTPLAPPS 361
           PP   TP       P PP   +P  +  P+  +PP   P P++P  +SP +   P  PPS
Sbjct: 570 PPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDASPIKKRRP-QPPS 629

Query: 362 PT-----EPSPSSPPYVHIPPAEPSPPGISAPPFPVYTPPPPHFPDFPSPPNTQPPVYCP 421
           P+       SP SPP VH P   P PP + +PP PV++PPPP      SPP   PPVY P
Sbjct: 630 PSTEETKTTSPQSPP-VHSP---PPPPPVHSPPPPVFSPPPP----MHSPP---PPVYSP 689

Query: 422 RSPY--PPSPPSYSPNPPDYHFTSPP---PPPPVY-PAPPVHTSPSPL---PLPCTKPP- 481
             P   PP PP +SP PP  H   PP   PPPPV+ P PPVH+ P P+   P P   PP 
Sbjct: 690 PPPVHSPPPPPVHSP-PPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPP 749

Query: 482 ----SPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPP--SPSPPVSVYPPLSPS 523
               SPPP A    PPPP   +P  P+H  SPPPPP     PP  SP PPV   PP   S
Sbjct: 750 PPVFSPPPPAPIYSPPPPPVHSPPPPVH--SPPPPPVHSPPPPVHSPPPPVHSPPPPVHS 809

BLAST of CmaCh11G005940 vs. ExPASy Swiss-Prot
Match: Q9XIL9 (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.1e-33
Identity = 215/528 (40.72%), Postives = 269/528 (50.95%), Query Frame = 0

Query: 3   NNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGSI 62
           +N L  C P  IG L N+ VFD S N   G LP +F GL S+E+ +++ N L+G IP +I
Sbjct: 259 DNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPENI 318

Query: 63  CDLPKLQNFTFSNNFFSGEPPECL----RVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPV 122
           C LPKL N T++ N+F+G+   C+    +     D RNCLP RP QR + +C   +S PV
Sbjct: 319 CKLPKLVNLTYAYNYFNGQGDSCVPGSQKQIALDDTRNCLPDRPKQRSAKECAVVISRPV 378

Query: 123 DCNAFKC-GGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFP---SPVAPSSPPSPSQS 182
           DC+  KC GGSS  TPS   SP    P   P P   S  P+ P   SPV     P P Q 
Sbjct: 379 DCSKDKCAGGSSQATPSKSPSPVPTRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQ 438

Query: 183 PSTPTEPPLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHF 242
           P          H+   SPPP+          SSPP  P    P  S+P+    P  P   
Sbjct: 439 PH---------HHVVHSPPPA----------SSPPTSP----PVHSTPSPVHKPQPPKES 498

Query: 243 PSPSAPSPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTPPTPPSPTKPSPSL 302
           P P+ P   SP +    P  P   SPP    PPS      PP  ++PP PP    P P  
Sbjct: 499 PQPNDPYDQSPVKFRRSPPPPPVHSPP----PPSPIHSPPPPPVYSPPPPPPVYSPPP-- 558

Query: 303 PPQGHTPPGPSPSEPSPSSPPQTHTPLAPPSPTEPSPSSPPYVHIPPAEPSPPGISAPPF 362
           PP  ++PP P P     S PP  H+P  PP    P  S PP VH P     PP + +PP 
Sbjct: 559 PPPVYSPPPPPPVH---SPPPPVHSP--PP----PVHSPPPPVHSP-----PPPVHSPPP 618

Query: 363 PVYTPPPPHFPDFPSPPNTQPPVYCPRSP-YPPSPPSYSPNPPDYHFTSPPPPPPVY-PA 422
           PV++PPPP +    SPP   PPV+ P  P + P PP +SP PP Y   SPPPPPPV+ P 
Sbjct: 619 PVHSPPPPVY----SPP--PPPVHSPPPPVHSPPPPVHSPPPPVY---SPPPPPPVHSPP 678

Query: 423 PPVHTSPSPLPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPPSPS 482
           PPV + P P+  P     SPPP   YS PPPP  S P  P++  SPP  P +  SPP+ +
Sbjct: 679 PPVFSPPPPVHSPPPPVYSPPPPV-YSPPPPPVKSPPPPPVY--SPPLLPPKMSSPPTQT 722

Query: 483 PPVSVYPPLSPSPPPPVVYESPPPPPTPVYGGPLPPIYGVPYASPPPP 521
            PV+  PP +PS       E+PPP    +    +PP  G  YASPPPP
Sbjct: 739 -PVNSPPPRTPSQ----TVEAPPPSEEFI----IPPFIGHQYASPPPP 722

BLAST of CmaCh11G005940 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 286.6 bits (732), Expect = 4.1e-77
Identity = 276/535 (51.59%), Postives = 326/535 (60.93%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           MNNGLNSCLP  IG LKN+TVFDVS NELVGPLPE+ G +VS+EQLNVA+N LSG IP S
Sbjct: 264 MNNGLNSCLPSDIGRLKNVTVFDVSFNELVGPLPESVGEMVSVEQLNVAHNMLSGKIPAS 323

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSN-PVDC 121
           IC LPKL+NFT+S NFF+GE P CLR+PEF DRRNCLPGRP QR  G+C +FLS  PV+C
Sbjct: 324 ICQLPKLENFTYSYNFFTGEAPVCLRLPEFDDRRNCLPGRPAQRSPGQCKAFLSRPPVNC 383

Query: 122 NAFKCGGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPSTPTE 181
            +F CG   SV+P     PPVV+P  PPS   PS PP  P+P+  S+PP+ + SP  P+ 
Sbjct: 384 GSFSCG--RSVSP----RPPVVTPLPPPS--LPSPPP--PAPIF-STPPTLT-SPPPPSP 443

Query: 182 PPLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAP 241
           PP  P Y P  PPP P    +P  P  PP  P P   SP  P  P  P  P + P P +P
Sbjct: 444 PP--PVYSPPPPPPPPPPVYSPPPPPPPP--PPPPVYSPPPPPPPPPPPPPVYSPPPPSP 503

Query: 242 SPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTP-PTPPSPTKPSPSLPPQGH 301
            P  P   +SPP  P P  PP  ++PP  P   SPP   +P PTP   T+P P  PP   
Sbjct: 504 PPPPP-PVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPP-PPHSP 563

Query: 302 TPPGPSPSEPSP---SSPPQTHTPLAPPSPTEP-SPSSPPYVHIPPAEPSPPGISAPPFP 361
            PP  SP  P P   SSPP  H+   P SP  P SP  P Y ++ P  P  P  S PP P
Sbjct: 564 PPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTP 623

Query: 362 VYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDYHFTSPPPPPPVYPAPPV 421
           VY+PPPP       PP  +PP   P   Y P PP     PP  H++SPPPPP  Y +PP 
Sbjct: 624 VYSPPPP-------PPCIEPPPPPPCIEYSPPPP-----PPVVHYSSPPPPPVYYSSPP- 683

Query: 422 HTSPSPLPLPCTKPPSPPPGAHYSEPPPPQ---SSTPSSPIHYNSPPPPP-GQYQSPPSP 481
                P P+  + PP PPP  HYS PPPP+    S P SP+HY+SPPPPP    +  P P
Sbjct: 684 -----PPPVYYSSPPPPPP-VHYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAPCEESPPP 743

Query: 482 SPPVSVYPP---LSPSPPPPVVYESPPPPPTPVYGGPLPPIYGVPYASPPPPPLY 524
           +P V   PP   +  SPPPPV+++S PPPP+P Y GPLPP+ GV YASPPPPP Y
Sbjct: 744 APVVHHSPPPPMVHHSPPPPVIHQS-PPPPSPEYEGPLPPVIGVSYASPPPPPFY 760

BLAST of CmaCh11G005940 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-73
Identity = 295/592 (49.83%), Postives = 340/592 (57.43%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           M NG NSCLP  IG LKN+TVFD S NELVG LP + GG+VS+EQLNVA+N  SG IP +
Sbjct: 276 MENGFNSCLPSQIGRLKNVTVFDFSFNELVGSLPASIGGMVSMEQLNVAHNRFSGKIPAT 335

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLS-NPVDC 121
           IC LP+L+NFTFS NFF+GEPP CL +P F DRRNCLP RP QR  G+C +F S  PVDC
Sbjct: 336 ICQLPRLENFTFSYNFFTGEPPVCLGLPGFDDRRNCLPARPAQRSPGQCAAFSSLPPVDC 395

Query: 122 NAFKCGGSSSVTPSSPFSPPVVSP-SSPPSP-VAPSSPPSFPS-PVAPS---SPPSPSQS 181
            +F CG S+      P  P   SP  SPPSP ++PS P + PS P  PS   SPPSPS  
Sbjct: 396 GSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIV 455

Query: 182 PSTPTEPPLSPHYPPLSPP------PSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTP 241
           PS P+  P SP  PP SP         PSS TTPT   SPP  P+   P  S P++PTTP
Sbjct: 456 PSPPSTTP-SPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTP 515

Query: 242 S------SPPHFPSPSAPSPSSPHQGHSPPSLPSPS---------SPPLGHTPPS--EPS 301
           S      SP   PSP    PS P    SP S PSPS         SPP   TPP+   P 
Sbjct: 516 SPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPG 575

Query: 302 QQSPPHSHTPP--TPPSPTKPSPSLPPQGHTPP--GPSPSEPSPSS--------PPQTHT 361
           Q SPP   +PP   P  P+ PSP LPP   +PP  GP+PS P PS+        PP T  
Sbjct: 576 QNSPPIIPSPPFTGPSPPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPTPVYSPPPPSTGY 635

Query: 362 PLAPP----SPTEPSPSSPPYVHIPPAEPSPPGISAPPFPVYTPPPP--HFPDFPSPPN- 421
           P  PP    SP  P P  PP     P+ P PP  +  PFP   PPPP  ++P  PSP   
Sbjct: 636 PPPPPFTGYSPPSPPPPPPPTFSPSPSIPPPPPQTYSPFPPPPPPPPQTYYPPQPSPSQP 695

Query: 422 TQPPVY--CPRSPYP--PSPPSYS--PNPPDYHFTSP-PPPPPVYPAPPV-----HTSPS 481
            Q P+Y   P SP P  PSPP ++  P P  Y+++SP PPPPP Y  PP      + SP 
Sbjct: 696 PQSPIYGTPPPSPIPYLPSPPQFASPPPPAPYYYSSPQPPPPPHYSLPPPTPTYHYISPP 755

Query: 482 PLPLPCTKPP--SPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPPSPSPPVSVY 524
           P P P   PP  S PP   YS PPPP        +HYN PPPP   + SPP PSPPV  Y
Sbjct: 756 PPPTPIHSPPPQSHPPCIEYSPPPPP-------TVHYNPPPPPSPAHYSPP-PSPPVYYY 815

BLAST of CmaCh11G005940 vs. TAIR 10
Match: AT1G62440.1 (leucine-rich repeat/extensin 2 )

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-37
Identity = 233/565 (41.24%), Postives = 285/565 (50.44%), Query Frame = 0

Query: 1   MMNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPG 60
           + N+ L  CLPP IG LKN+TVFD+S N L GPLP + G + SLEQLNVANN  +G IP 
Sbjct: 291 LSNDNLTGCLPPQIGNLKNVTVFDISFNRLSGPLPSSIGNMKSLEQLNVANNRFTGVIPS 350

Query: 61  SICDLPKLQNFTFSNNFFSGEPPECLRV----PEFSDRRNCLPGRPMQRPSGKCNSFLSN 120
           SIC L  L+NFT+S+NFF+G+ P C+ +       +   NC+ G+  QR S +C+S  S 
Sbjct: 351 SICQLSNLENFTYSSNFFTGDAPRCVALLGDNVVVNGSMNCIDGKEDQRSSKECSSPASR 410

Query: 121 PVDCNAFKCGGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPS 180
            VDC+ F C    S  P S    P V    PP P +  SP    +P  PSS  SPS   +
Sbjct: 411 SVDCSKFGCNNFFSPPPPSFKMSPTVRVLPPPPPSSKMSPTFRATPPPPSSKMSPSFRAT 470

Query: 181 TPTEPPLSPHYPPL-SPPPSPSSSTTPTTPSSPPHFP----SPSAPSPSSPTTPTTPSSP 240
            P  PP S   P   + PP PSS  +P+  + PP  P     PS P PSS  +P+  + P
Sbjct: 471 PP--PPSSKMSPSFRATPPPPSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYP 530

Query: 241 PHFPSPSAPSPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTPPTPPSPTKPS 300
           P  P P +P P SP     PP + S   PP    PP       PP  + PPT  SP    
Sbjct: 531 P--PPPLSPPPPSP----PPPYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPP--- 590

Query: 301 PSLPPQGHTPPGPSPSEPSPSSPPQTHTPLAPPSPTEPSPSSPPYVHIPPAEPSPPGISA 360
              PP+    P P    PSPS P   +T  +PP PT  +  SPP    PP  P+   + +
Sbjct: 591 ---PPKYEQTPSPREYYPSPSPPYYQYTS-SPPPPTYYATQSPP----PPPPPTYYAVQS 650

Query: 361 PPFPVYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPP-SYSPNPPDYHFTSPPPPPPVY 420
           PP     PPP ++P   + P   P  Y P    PP PP  YSP        SPPPPPPVY
Sbjct: 651 PP----PPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVT-----QSPPPPPPVY 710

Query: 421 PAPPVHTSPSPLPL---PCTKPPSPPPGAHYSEPPPPQSSTPSSPIHY----NSPPPPPG 480
             PPV  SP P P+   P T+ P PPP  +Y   P  QS  P SP++Y     SPPPP  
Sbjct: 711 -YPPVTQSPPPSPVYYPPVTQSPPPPP-VYYL--PVTQSPPPPSPVYYPPVAKSPPPPSP 770

Query: 481 QY-----QSPPSPSPPVSVYPPLSPSPPPPVVYESPPP---------------------P 523
            Y     QSPP PS PV  +PP SP+  PP  Y+SPPP                     P
Sbjct: 771 VYYPPVTQSPPPPSTPVEYHPPASPNQSPPPEYQSPPPKGCNDSPSNDHHYQTPTPPSLP 823

BLAST of CmaCh11G005940 vs. TAIR 10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-35
Identity = 231/578 (39.97%), Postives = 288/578 (49.83%), Query Frame = 0

Query: 2   MNNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGS 61
           + N L+ CLP  IG+L N+TVFD SSN  VG LP T  GL ++EQ++ + N  +G +  +
Sbjct: 270 IGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDN 329

Query: 62  ICDLPKLQNFTFSNNFFSGEPPECL----RVPEFSDRRNCLPGRPMQRPSGKCNSFLSNP 121
           IC LPKL NFTFS NFF+GE   C+    +  +F D  NCL  RP Q+ + +C   +S P
Sbjct: 330 ICKLPKLSNFTFSYNFFNGEAQSCVPGSSQEKQFDDTSNCLQNRPNQKSAKECLPVVSRP 389

Query: 122 VDCNAFKC----GGSSSVTPSSPFSPPVVSPS---SPPSPVAPS--SPPSFPSPVAPS-S 181
           VDC+  KC    GG S+ +P    +P    P    +PP+   PS   P   P P  PS  
Sbjct: 390 VDCSKDKCAGGGGGGSNPSPKPTPTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPK 449

Query: 182 PPSPSQSPSTPTEP------PLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSS 241
           P +PS  PS P EP        SP      P P      +P   +  P  P P   SP  
Sbjct: 450 PETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQ 509

Query: 242 PTTPTTPSSPPHFPSP------SAPSPSSPHQGHSPPSLPSPSSPPLGHTP-PSEPSQQS 301
            ++   P  P   P P       +P P  P Q    P       PP   TP P E  +  
Sbjct: 510 ESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQ 569

Query: 302 PPHSHTP-------PTPPSPTKPSPSLPPQGHTPP--GPSPSEPSPSSPPQTHTPLAPPS 361
           PP   TP       P PP   +P  +  P+  +PP   P P++P  +SP +   P  PPS
Sbjct: 570 PPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDASPIKKRRP-QPPS 629

Query: 362 PT-----EPSPSSPPYVHIPPAEPSPPGISAPPFPVYTPPPPHFPDFPSPPNTQPPVYCP 421
           P+       SP SPP VH P   P PP + +PP PV++PPPP      SPP   PPVY P
Sbjct: 630 PSTEETKTTSPQSPP-VHSP---PPPPPVHSPPPPVFSPPPP----MHSPP---PPVYSP 689

Query: 422 RSPY--PPSPPSYSPNPPDYHFTSPP---PPPPVY-PAPPVHTSPSPL---PLPCTKPP- 481
             P   PP PP +SP PP  H   PP   PPPPV+ P PPVH+ P P+   P P   PP 
Sbjct: 690 PPPVHSPPPPPVHSP-PPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPP 749

Query: 482 ----SPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPP--SPSPPVSVYPPLSPS 523
               SPPP A    PPPP   +P  P+H  SPPPPP     PP  SP PPV   PP   S
Sbjct: 750 PPVFSPPPPAPIYSPPPPPVHSPPPPVH--SPPPPPVHSPPPPVHSPPPPVHSPPPPVHS 809

BLAST of CmaCh11G005940 vs. TAIR 10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-34
Identity = 215/528 (40.72%), Postives = 269/528 (50.95%), Query Frame = 0

Query: 3   NNGLNSCLPPVIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGNIPGSI 62
           +N L  C P  IG L N+ VFD S N   G LP +F GL S+E+ +++ N L+G IP +I
Sbjct: 259 DNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPENI 318

Query: 63  CDLPKLQNFTFSNNFFSGEPPECL----RVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPV 122
           C LPKL N T++ N+F+G+   C+    +     D RNCLP RP QR + +C   +S PV
Sbjct: 319 CKLPKLVNLTYAYNYFNGQGDSCVPGSQKQIALDDTRNCLPDRPKQRSAKECAVVISRPV 378

Query: 123 DCNAFKC-GGSSSVTPSSPFSPPVVSPSSPPSPVAPSSPPSFP---SPVAPSSPPSPSQS 182
           DC+  KC GGSS  TPS   SP    P   P P   S  P+ P   SPV     P P Q 
Sbjct: 379 DCSKDKCAGGSSQATPSKSPSPVPTRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQ 438

Query: 183 PSTPTEPPLSPHYPPLSPPPSPSSSTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHF 242
           P          H+   SPPP+          SSPP  P    P  S+P+    P  P   
Sbjct: 439 PH---------HHVVHSPPPA----------SSPPTSP----PVHSTPSPVHKPQPPKES 498

Query: 243 PSPSAPSPSSPHQGHSPPSLPSPSSPPLGHTPPSEPSQQSPPHSHTPPTPPSPTKPSPSL 302
           P P+ P   SP +    P  P   SPP    PPS      PP  ++PP PP    P P  
Sbjct: 499 PQPNDPYDQSPVKFRRSPPPPPVHSPP----PPSPIHSPPPPPVYSPPPPPPVYSPPP-- 558

Query: 303 PPQGHTPPGPSPSEPSPSSPPQTHTPLAPPSPTEPSPSSPPYVHIPPAEPSPPGISAPPF 362
           PP  ++PP P P     S PP  H+P  PP    P  S PP VH P     PP + +PP 
Sbjct: 559 PPPVYSPPPPPPVH---SPPPPVHSP--PP----PVHSPPPPVHSP-----PPPVHSPPP 618

Query: 363 PVYTPPPPHFPDFPSPPNTQPPVYCPRSP-YPPSPPSYSPNPPDYHFTSPPPPPPVY-PA 422
           PV++PPPP +    SPP   PPV+ P  P + P PP +SP PP Y   SPPPPPPV+ P 
Sbjct: 619 PVHSPPPPVY----SPP--PPPVHSPPPPVHSPPPPVHSPPPPVY---SPPPPPPVHSPP 678

Query: 423 PPVHTSPSPLPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPGQYQSPPSPS 482
           PPV + P P+  P     SPPP   YS PPPP  S P  P++  SPP  P +  SPP+ +
Sbjct: 679 PPVFSPPPPVHSPPPPVYSPPPPV-YSPPPPPVKSPPPPPVY--SPPLLPPKMSSPPTQT 722

Query: 483 PPVSVYPPLSPSPPPPVVYESPPPPPTPVYGGPLPPIYGVPYASPPPP 521
            PV+  PP +PS       E+PPP    +    +PP  G  YASPPPP
Sbjct: 739 -PVNSPPPRTPSQ----TVEAPPPSEEFI----IPPFIGHQYASPPPP 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9T0K55.8e-7651.59Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
Q9SN463.9e-7249.83Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
O488092.0e-3641.24Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
Q9LJ644.2e-3439.97Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thali... [more]
Q9XIL92.1e-3340.72Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thali... [more]
Match NameE-valueIdentityDescription
AT4G13340.14.1e-7751.59Leucine-rich repeat (LRR) family protein [more]
AT4G18670.12.7e-7349.83Leucine-rich repeat (LRR) family protein [more]
AT1G62440.11.4e-3741.24leucine-rich repeat/extensin 2 [more]
AT3G19020.13.0e-3539.97Leucine-rich repeat (LRR) family protein [more]
AT2G15880.11.5e-3440.72Leucine-rich repeat (LRR) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..107
e-value: 3.9E-22
score: 80.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 19..76
e-value: 2.6E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..510
NoneNo IPR availablePANTHERPTHR32093LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATEDcoord: 1..203
NoneNo IPR availablePANTHERPTHR32093:SF120LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATEDcoord: 1..203
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G005940.1CmaCh11G005940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding