CmaCh09G004610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G004610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor SHINE 2-like
Location	Cma_Chr09: 2028621 .. 2030524 (+)
RNA-Seq Expression	CmaCh09G004610
Synteny	CmaCh09G004610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAAACAGGCTCTTATTCAATTCAAACACTCCATCTTCCTCACTGGGATCATAAATGGCGCTTTATGATCTAAACCTGCAAATTTTCCTCTTCCCTTTCCCCATTCCCACAAAGCTCAGAAGTAAAATTTAATGAAACCTTCTTTTTGGATAGCAGACAGATTAGAAGTTTTGGGGGTTCCTTTTCGATCTGCCATTGGAGAGAGAGAAGAAAAGTTGCAGAAATGGGAGAGAGATTTGAAATGAGCGGAATCTCATTAAATTTTGGTTGTTAAGAAGCTGCGACTGTGGATCTTTCATGGTGAGCAGGTGAAAGTTTTTAATGGCCAACCCCATTTAAAAAGTACTATTGTGTTGTTGTTGTTGTTCTTCTTCTTCTCTATCAAATAATTTTCAATTTCCACCGACAATTCTATATAAATGGCTGAAATTATTACTCTCTGTACGTTTTTCAACTCTCTCACCTGTTTTTTTTTGTTTTTTTTTTTTTTTTAATTTCTCTATCTCTCTCTTGTTGAAGGCTCTGAAATTCTCTGTGTTTCTCTCTCTAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCGTTGCTGTAAATTCACTCTTACATTACGTTGGTTGTTCTTTTGCTATAAATATATGCGCCATTGGTTGGGTTTATTGGTTCGATTGTCCTCTGTTTCCTCCATTTTCTGTCTGTTGCCCATAACCTGTTTGATGATTTGCCTGAAAGAAACTGGTCTCCTTTGGTGGCATATGTTTTTGAAAACTCGTATACTGCATTATTGTCGTTATGTTTGTGATCAATTTATTGTGTTTATTGGTTAAAAATGCTGTGAAAACCCCCTTTTTTTTGGTGCCCATAAGGTGTTTGTTGATATGCCTGAAAGAATCTGGGTGGCCATGGCATGCATATTTCTGTAGATTTGTGAACTACAATTTCCTCTGCTGTAAATGTATGCATTGATTGTGTGTGTTGGTTCAGAAAAAAAGCTCTGAAAAATGGAAACCCACCATTGTTGTGCCGTAAACAAAGAAGCTAGCCGGCTATGGCCATTGACCACGCTCATTTCTGCTATACATTACACCTTGAGCCCACATTCTTATACGTTTCATGTGTTAATTTCTTTGTAGGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGCAGAAGCCAGCCATGGCCATGGGCACGGATCTTCTCCAATGACCCCAAAAGCACTCTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTGCGGCTCGACAGTGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCAGGCACACGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGATCCCGTCCCCATTGCCATCGCCCGAATCGACGAGCCAGGAAGCCGATGGCCATCGGAACGGAATCGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAATTTCAAGCTAAGTACAAGATCTCAACTCTAAAAATAAAGTAACAATAGTAATAAAACCCCATAAGATCAAAACAAATAGGCTAATTATGTGTATATATATATATATATATATCTGTTGTGCTTACTGTTTATGGGACTTTGGGAAGCTCAAAATCTGTATAAAGGGAGAGCTTTTATAAATATTGTCTGTTTTTTTTTTTGTCGATTTTAATCATATATATATATATATAGAAATGAAT

mRNA sequence

GCGAAACAGGCTCTTATTCAATTCAAACACTCCATCTTCCTCACTGGGATCATAAATGGCGCTTTATGATCTAAACCTGCAAATTTTCCTCTTCCCTTTCCCCATTCCCACAAAGCTCAGAAGTAAAATTTAATGAAACCTTCTTTTTGGATAGCAGACAGATTAGAAGTTTTGGGGGTTCCTTTTCGATCTGCCATTGGAGAGAGAGAAGAAAAGTTGCAGAAATGGGAGAGAGATTTGAAATGAGCGGAATCTCATTAAATTTTGGTTGTTAAGAAGCTGCGACTGTGGATCTTTCATGGTGAGCAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCGTTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGCAGAAGCCAGCCATGGCCATGGGCACGGATCTTCTCCAATGACCCCAAAAGCACTCTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTGCGGCTCGACAGTGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCAGGCACACGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGATCCCGTCCCCATTGCCATCGCCCGAATCGACGAGCCAGGAAGCCGATGGCCATCGGAACGGAATCGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAATTTCAAGCTAAGTACAAGATCTCAACTCTAAAAATAAAGTAACAATAGTAATAAAACCCCATAAGATCAAAACAAATAGGCTAATTATGTGTATATATATATATATATATATCTGTTGTGCTTACTGTTTATGGGACTTTGGGAAGCTCAAAATCTGTATAAAGGGAGAGCTTTTATAAATATTGTCTGTTTTTTTTTTTGTCGATTTTAATCATATATATATATATATAGAAATGAAT

Coding sequence (CDS)

ATGGTGAGCAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCGTTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGCAGAAGCCAGCCATGGCCATGGGCACGGATCTTCTCCAATGACCCCAAAAGCACTCTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTGCGGCTCGACAGTGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCAGGCACACGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGATCCCGTCCCCATTGCCATCGCCCGAATCGACGAGCCAGGAAGCCGATGGCCATCGGAACGGAATCGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAATTTCAAGCTAA

Protein sequence

MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

Homology

[Close]

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-60
Identity = 117/186 (62.90%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFP  K   +  S+     S+  +PK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIG
Sbjct: 61  NFPVIK---SNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAG++ + NWV  +ELG K    P    E+   +       + E+D++AMQMIEEL
Sbjct: 121 VWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEEL 180

Query: 186 LNWNCP 192
           LNW CP
Sbjct: 181 LNWTCP 181

[Close]

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.7e-60
Identity = 118/190 (62.11%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFP  K +   + H     S  M+PK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIG
Sbjct: 61  NFPVVKSEEG-SDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEADGHRNGIDEEDRIAM 185
           VWQKRAG++ +  WVMR+ELG     S +       + ++  +E +     I +ED++AM
Sbjct: 121 VWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAM 180

Query: 186 QMIEELLNWN 190
           +MIEELLNW+
Sbjct: 181 EMIEELLNWS 189

[Close]

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.0e-57
Identity = 114/199 (57.29%), Postives = 144/199 (72.36%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 66  NFPASKDQSAEASHG------HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDS 125
           NFP + + + E S G          SS  +  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 126 DNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEADGHRNGI 185
            ++HIGVWQKRAG+++ S+WVM +ELG         S  S        T  E  G R  +
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 186 -DEEDRIAMQMIEELLNWN 190
            DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 10  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 69
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 70  SKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKC 105
           + +    +S            K LS  L+ KL KC
Sbjct: 66  NPNAIPTSS-----------SKLLSATLTAKLHKC 89

[Close]

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 10  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 69
           +++RG RQR WGSWVSEIRH +LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY 65

Query: 70  SKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKC 105
           + + S  +S            K LS  L  KL +C
Sbjct: 66  NPNASQSSS-----------SKLLSATLIAKLHRC 89

[Close]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL
Match: A0A6J1IGA2 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.6e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60
           MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG
Sbjct: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60

Query: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120
           QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD
Sbjct: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120

Query: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180
           NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ
Sbjct: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180

Query: 181 MIEELLNWNCPLPSISS 198
           MIEELLNWNCPLPSISS
Sbjct: 181 MIEELLNWNCPLPSISS 197

[Close]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL
Match: A0A6J1IIU8 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.4e-107
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 180

Query: 186 LNWNCPLPSISS 198
           LNWNCPLPSISS
Sbjct: 181 LNWNCPLPSISS 192

[Close]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.0e-105
Identity = 194/197 (98.48%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60
           MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG
Sbjct: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60

Query: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120
           QNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD
Sbjct: 61  QNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120

Query: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180
           NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQ
Sbjct: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQ 180

Query: 181 MIEELLNWNCPLPSISS 198
           MIEELLNWNCPLPSISS
Sbjct: 181 MIEELLNWNCPLPSISS 195

[Close]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL
Match: A0A6J1FE03 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.7e-103
Identity = 189/192 (98.44%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG
Sbjct: 61  NFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEEL 180

Query: 186 LNWNCPLPSISS 198
           LNWNCPLPSISS
Sbjct: 181 LNWNCPLPSISS 190

[Close]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL
Match: A0A6J1BYX9 (ethylene-responsive transcription factor SHINE 2-like OS=Momordica charantia OX=3673 GN=LOC111006480 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 2   VSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 61
           +S VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ
Sbjct: 78  LSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 137

Query: 62  NAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDN 121
           NAKTNFPASK+Q+ E    HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN
Sbjct: 138 NAKTNFPASKNQAEEGR--HGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDN 197

Query: 122 AHIGVWQKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSQEADGHRNGIDEEDRI 181
           AHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S EADGHRNGIDEEDRI
Sbjct: 198 AHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRI 257

Query: 182 AMQMIEELLNWNCPLPSISS 198
           AMQMIEELLNWNCPLPS SS
Sbjct: 258 AMQMIEELLNWNCPLPSTSS 275

[Close]

BLAST of CmaCh09G004610 vs. NCBI nr
Match: XP_022976201.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 5.4e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60
           MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG
Sbjct: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60

Query: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120
           QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD
Sbjct: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120

Query: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180
           NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ
Sbjct: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180

Query: 181 MIEELLNWNCPLPSISS 198
           MIEELLNWNCPLPSISS
Sbjct: 181 MIEELLNWNCPLPSISS 197

[Close]

BLAST of CmaCh09G004610 vs. NCBI nr
Match: XP_023536493.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 194/197 (98.48%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60
           MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG
Sbjct: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60

Query: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120
           QNAKTNFPASKDQS EASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD
Sbjct: 61  QNAKTNFPASKDQSTEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120

Query: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180
           NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE D HRNGIDEEDRIAMQ
Sbjct: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDAHRNGIDEEDRIAMQ 180

Query: 181 MIEELLNWNCPLPSISS 198
           MIEELLNWNCPLPSISS
Sbjct: 181 MIEELLNWNCPLPSISS 197

[Close]

BLAST of CmaCh09G004610 vs. NCBI nr
Match: XP_022976202.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976203.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976204.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976205.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 1.9e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 180

Query: 186 LNWNCPLPSISS 198
           LNWNCPLPSISS
Sbjct: 181 LNWNCPLPSISS 192

[Close]

BLAST of CmaCh09G004610 vs. NCBI nr
Match: KAG7024462.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.9 bits (1008), Expect = 1.6e-105
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTS+E DGHRNGIDEEDRIAMQMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSEEPDGHRNGIDEEDRIAMQMIEEL 180

Query: 186 LNWNCPLPSISS 198
           LNWNCPLPSISS
Sbjct: 181 LNWNCPLPSISS 192

[Close]

BLAST of CmaCh09G004610 vs. NCBI nr
Match: XP_022936544.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.1e-105
Identity = 194/197 (98.48%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60
           MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG
Sbjct: 1   MVSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNG 60

Query: 61  QNAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120
           QNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD
Sbjct: 61  QNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSD 120

Query: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQ 180
           NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQ
Sbjct: 121 NAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQ 180

Query: 181 MIEELLNWNCPLPSISS 198
           MIEELLNWNCPLPSISS
Sbjct: 181 MIEELLNWNCPLPSISS 195

[Close]

BLAST of CmaCh09G004610 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-61
Identity = 117/186 (62.90%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFP  K   +  S+     S+  +PK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIG
Sbjct: 61  NFPVIK---SNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAG++ + NWV  +ELG K    P    E+   +       + E+D++AMQMIEEL
Sbjct: 121 VWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEEL 180

Query: 186 LNWNCP 192
           LNW CP
Sbjct: 181 LNWTCP 181

[Close]

BLAST of CmaCh09G004610 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 118/190 (62.11%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFP  K +   + H     S  M+PK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIG
Sbjct: 61  NFPVVKSEEG-SDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEADGHRNGIDEEDRIAM 185
           VWQKRAG++ +  WVMR+ELG     S +       + ++  +E +     I +ED++AM
Sbjct: 121 VWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAM 180

Query: 186 QMIEELLNWN 190
           +MIEELLNW+
Sbjct: 181 EMIEELLNWS 189

[Close]

BLAST of CmaCh09G004610 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-58
Identity = 114/199 (57.29%), Postives = 144/199 (72.36%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 66  NFPASKDQSAEASHG------HGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDS 125
           NFP + + + E S G          SS  +  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 126 DNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEADGHRNGI 185
            ++HIGVWQKRAG+++ S+WVM +ELG         S  S        T  E  G R  +
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 186 -DEEDRIAMQMIEELLNWN 190
            DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmaCh09G004610 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-58
Identity = 114/186 (61.29%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65
           MV+S+KFRGVRQRQWGSWVSEIRHPLL   VWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125
           NFP  K   +  S+     S+  +PK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIG
Sbjct: 61  NFPVIK---SNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIG 120

Query: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185
           VWQKRAG++ + NWV  +ELG K    P    E+   +       + E+D++AMQMIEEL
Sbjct: 121 VWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEEL 178

Query: 186 LNWNCP 192
           LNW CP
Sbjct: 181 LNWTCP 178

[Close]

BLAST of CmaCh09G004610 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-24
Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 10  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 69
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 70  SKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKC 105
           + +    +S            K LS  L+ KL KC
Sbjct: 66  NPNAIPTSS-----------SKLLSATLTAKLHKC 89

The following BLAST results are available for this feature:

BLAST of CmaCh09G004610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E958	2.8e-60	62.90	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	3.7e-60	62.11	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9XI33	5.0e-57	57.29	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AW5	1.1e-22	58.95	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.4e-19	52.63	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of CmaCh09G004610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGA2	2.6e-109	100.00	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1IIU8	9.4e-107	100.00	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima ...	[more]
A0A6J1F8L5	1.0e-105	98.48	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1FE03	3.7e-103	98.44	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1BYX9	2.0e-93	88.50	ethylene-responsive transcription factor SHINE 2-like OS=Momordica charantia OX=...	[more]

BLAST of CmaCh09G004610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976201.1	5.4e-109	100.00	ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita maxima]	[more]
XP_023536493.1	3.0e-107	98.48	ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita pepo subs...	[more]
XP_022976202.1	1.9e-106	100.00	ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >...	[more]
KAG7024462.1	1.6e-105	98.96	Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperm...	[more]
XP_022936544.1	2.1e-105	98.48	ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh09G004610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25390.2	2.0e-61	62.90	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	2.6e-61	62.11	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.6e-58	57.29	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	3.6e-58	61.29	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	7.5e-24	58.95	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 12..23 score: 60.91 coord: 34..50 score: 72.19
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 11..74 e-value: 7.4E-40 score: 148.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 11..60 e-value: 4.0E-13 score: 49.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 11..68 score: 21.904358
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 11..70 e-value: 2.28162E-34 score: 114.291
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 10..70 e-value: 5.1E-27 score: 95.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..168
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 6..195
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 6..195
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 11..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G004610.1	CmaCh09G004610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity