CmaCh08G005410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G005410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr08: 3115447 .. 3116541 (+)
RNA-Seq Expression	CmaCh08G005410
Synteny	CmaCh08G005410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTCTTTAAGCTTTTATTTTTTCTGTTATTTAATCGAATTTCGGACTGAAAATTTTCCTTCTATATTCACGTGAACAGGGAAGAGGCTCTCTCTTCGTCTACTTCACTTTTCTGCCTAAACACAAATTTCCCAGCCTTCGGGTCAGTTAATGACCAATTTCAATCCAATCGCTCCTCAAATTCATCAACAGATCTTCCATCTGGTCTTGCGGAATCCGATCGTCGTCGAGTTTCGCAGTCGAAGCGGAAGATTTCGATTCTGAGATTCAAAGTTGTTCTAAGAGCGTTCGGGTAAGTTAATGATTTGTTTTGATCGGTTAAAGAATATTAGTTACTTGCTCTTCGTCGTTTTGGATACTGTATTTGCTTGTGTTTTCACTTTTGATTGGGATTGTTCTTCGCGGGCTATTAGGATCAGGAGCTAGGGTTTTGTTTCTTATTCGATATGGTTTCGCTTTTATTACGCGGATGTTTATGTGCTCGTTTTTCCTTGTTGCTCAACGTTTTGATATGCGGTCTAGTGATTTTTACCTGCGTCATCAAAATTACGGAAATATTGGAGTGTGGTATTTGTTAATCGTCGTCTGGAGCCTGGTCGTTGTAGTTGTTATTTTTATTTAATATTGGCCGTTTTGATTTGGTCGGTTAACTGTTTTGAGGTTTTGATCGATATTTGATTTTGACAAAGACACTTGCATTAGCAGCTCGGTGTAAGAGATTTTTGTGGACTATTGGTTAAATTAGTTCGTCCATGTGAGCTTTTTGTTATTGTCTTGCTACAAGTTGGCACTGTTTTTGTGTCTTCGTGGTCTATCAGTGTAAGGTACCCAAAAAATTTAGGGTCTGCTGAACTGTGCTTATATATATATATATATATATATATATATATATATCTTCTTTTTTATCTATATAAATGCGGAATTAACGATGTTATGTTTAACTAGTGCAAAAGTTGGTGGGTGTTTGAATGGAGAAGATTTCCATTTATCCTTTGGGATATCCCACTTTTTTCTGGATGATTTGAACGTTAATTTTTTTCTTTCAGGGTTTGTCTGCTAAATTCAGTTTTCTACTTTTACCTCCTTGTTTAA

mRNA sequence

ATGCGTTCTTTAAGCTTTTATTTTTTCTGTTATTTAATCGAATTTCGGACTGAAAATTTTCCTTCTATATTCACGGAAGAGGCTCTCTCTTCGTCTACTTCACTTTTCTGCCTAAACACAAATTTCCCAGCCTTCGGGTCAGTTAATGACCAATTTCAATCCAATCGCTCCTCAAATTCATCAACAGATCTTCCATCTGGTCTTGCGGAATCCGATCGTCGTCGAGTTTCGCAGTCGAAGCGGAAGATTTCGATTCTGAGATTCAAAGTTGTTCTAAGAGCGTTCGGGGTTTGTCTGCTAAATTCAGTTTTCTACTTTTACCTCCTTGTTTAA

Coding sequence (CDS)

ATGCGTTCTTTAAGCTTTTATTTTTTCTGTTATTTAATCGAATTTCGGACTGAAAATTTTCCTTCTATATTCACGGAAGAGGCTCTCTCTTCGTCTACTTCACTTTTCTGCCTAAACACAAATTTCCCAGCCTTCGGGTCAGTTAATGACCAATTTCAATCCAATCGCTCCTCAAATTCATCAACAGATCTTCCATCTGGTCTTGCGGAATCCGATCGTCGTCGAGTTTCGCAGTCGAAGCGGAAGATTTCGATTCTGAGATTCAAAGTTGTTCTAAGAGCGTTCGGGGTTTGTCTGCTAAATTCAGTTTTCTACTTTTACCTCCTTGTTTAA

Protein sequence

MRSLSFYFFCYLIEFRTENFPSIFTEEALSSSTSLFCLNTNFPAFGSVNDQFQSNRSSNSSTDLPSGLAESDRRRVSQSKRKISILRFKVVLRAFGVCLLNSVFYFYLLV

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh08G005410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh08G005410 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G005410.1	CmaCh08G005410.1	mRNA