CmaCh06G013660 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G013660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	meiotic recombination protein DMC1 homolog
Location	Cma_Chr06: 8930347 .. 8933997 (+)
RNA-Seq Expression	CmaCh06G013660
Synteny	CmaCh06G013660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTCGCAACGCTCAAGTGAGTTAGAAATTTGTTCTCGTTATCTTTCGTTTTCAAATTGTAACAATTACTTCTTAATCTATCCGTCGCATTCTCTCTCATTTTGTCGCTGTGATGTTGCTCAGAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACGTAAGTTTCAGAGCTTATAACTTATAATCAAGTTATGGTTTCGCTATTCAAAGAATTTCCTCGCTGACTCTTGTTTTGTGAAGTTCAAACAAAACTTGATTTCGTGACATTCTATCTTAGTGATTTGCTTGTTGACCTCGAGGTTGATTTGAAAAACTCCAATGCTAATCGATTTTCTTTTCTCCGAAGAGATATGAGATCGCTGATACGGCATCACGGAATCTCATTCGATTGATTCATCAGCAATTTAATTTAGTGATCCTTTCATTTCGCGATAGCCTTGCATCCAGTTTAGCTAGGTTTATTTTTTGTAGTGGCCTATTTTCTCAAGGCATGCAATTCTACCAGAGTTTTGCTAAAGTCGAGGGGAAGATGCAACTAGTTTTAGCCATCAACTAACTATCATGCTGTACTGTTGTTCCACTACATCTGATAGAGTTCCTATGGAATTTTCTGTGCAGTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGGTAGAACAATTCTTACATCCGATTCTATATATTCTGAATTTGATGTAATTATAGTGACCAGGGGATTTGTATCTTAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGGTCAGCGACTCAATCACCACTTCTGTTATCCACGATGCGTGCAATGGTTTACACAATGATATCAAAATGCGATGAAGTCCAGCTTTTCTTCAATTAACAGTTATTATTTGTCTGTTGTTTTTCAGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGGTAAGCTGCTTCTGTTTTTTATTGGTAACAAATGGAGTGTAACCAAATAGATCCATACTTCACCAAAATGTACAGTTCGCATAGTCTCCCTTTCCTTTCCCGCATGCTATAAGTTTCGCGTTCGGAAACAACTGTGTACGATTACCTTTAGTTTTTCTTGTAGCTCCTATAAGTTCAAGATATCTTCTAGTAAAATACTGTCCGTCATGAAATGCAGACTGAGACCTTGATTTTTGTTTGTAGAGAAAGTCTGTAGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGATTTACCACGTTCCTTTTTTCACTATCTCACCAATCATAAGCATTAAATATTGCTTTAATTCTTTCCAAAAGGTGGAATTGAAACTCTAGCGATCACGGAAGCTTTTGGAGAATTCAGGTGAGAATGCATATGTTAAAAGGCGCTTCAATTTTGTTTATTGAAAATCGAAGTCCCGTATTTAAATTTCCGTTCTCCTCTGACCTCGTTAAACTAATGCTAGGTCCGGGAAAACGCAACTCGCGCATACTCTATGTGTCTCTACGCAGGTAATCTACGCCTCATCTGAACATTCATTGGGGTGCAATAGTCTTGTTCCTTTTTTCGGTTCTCAGGTCGATGGAATTTTATTAGTTACTTACAGAAATCGTTTTGACACCGTCCAAATATAACTTATGCCTTTCACTCTCCTGGCACCTGTTATAAAGCTTACTCATACTAGTCTCCAGAGAAAGTCAAGTGCCCACAAAATAGTTATGGAATTACAATTGAGATTGTATTTCAGAAAACCTGGAAGCATATACTTGTTCGGCTTCGCATCTGATCTTTAAAATTGAGTTCGATTTATGTAATGCTATATTTGGTAATATATGTATTCAAAGAAAAACTCAGGTTTACTTATCTTTCTTATAAATCTCGTAAGTACTTAGCGCCTCTTTAGCTGCATCAAATCTGATAACATCTTAACGATTGTGCTTGGCGTTGGCCTTCGCAGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTGTATCCTCTTTTGAAGCTTCTTTTATCATGTCGTTATCGTGGCATGTCTAGAGAATTGAAATGATTATCTTCAGAGATGTTCCCCTTTTCAATATGTCCTCTCCTTAACCACACGCACCTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATGTAAGCACCATTCTTTTGCATATAGCTCCTTTCAACCAGATCACAAATCTTTTATTAATTTGCTGCTAATGAAATAGATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGGTGAGTCACCTGGTAACTTGTAATTCAAATGTCAAAAACTATGTTGCCTGACATACATTCTATCTCTTAATTTCAGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGGTCGAATCCTATAGACTTCAACAGACGTCTTAGAATTTAATTTCCCTATCTAAGTCTCACCTGTCACCTTGTTTCATCAATTATGACACAAGCTGGTTGTCAAGTGCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGGTAGCGATTGAACTTTATGGAAGTCGTTTCTAGTGCTTAATCATCTCATTCAGGCAATCCATGACAGACATGTTAGCTCAATTTATGGTCAGAATATTTTGACCTTGGTACTTCTTGTATTAGCTGGATTGACTGAGACAAAATCGTTTGCTGTTGAGTACACAAAACTGGTGTTTATCATTCAAAATGTTGGTCACTGAACGCGCTATCTGTCTTGTTGACAACAGTTGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGGTATAAACATCGAACCCATGAATCTCAACGATTTCCGAAATCATCGAACCAATGATGTAAGCAAGCAGTAAGTCCTACAATTCTACTGCACTCATATCACTACATAAAAATTGTACTTGTTAAACATTGTAGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGGTTGAAATGTTTTAAACTTTTCATCTAGTTACTGGATACATATTTTTATCTTCTAGTGACAGTATGTAA

mRNA sequence

ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGTATGTAA

Coding sequence (CDS)

ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGTATGTAA

Protein sequence

MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQDPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFLVDKAEEKRLHLSHNFSLTEPRFSDNTRGHCRCKGLTPHVVLENQRKHSM

Homology

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BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 7.8e-138
Identity = 256/332 (77.11%), Postives = 273/332 (82.23%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLK+EE S QLQ+VEREDI+D++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKK+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPTNMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFS 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 281
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQ   DPGGGVFV+DPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 460.7 bits (1184), Expect = 1.5e-128
Identity = 237/331 (71.60%), Postives = 268/331 (80.97%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           M+A+LKAEE S Q+Q+VERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSD L++                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPTNM+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 280
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQ   DPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.9e-126
Identity = 236/325 (72.62%), Postives = 257/325 (79.08%), Query Frame = 0


Query: 10  EQSQQLQIVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHL 69
           E   QLQ+++R++  E+E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTKK+L
Sbjct: 12  ESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKNL 71

Query: 70  TGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------------- 129
           TGIKGLSEAKVDKICEAAEKLVN GYITGSDVLL+                         
Sbjct: 72  TGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGGGIETL 131

Query: 130 -------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 189
                                    LP +M GGNGKVAYIDTEGTFRPDRIVPIAERFGM
Sbjct: 132 QITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGM 191

Query: 190 DPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 249
           D  AVLDNIIYARAYTYEHQ+NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 192 DASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAE 251

Query: 250 RQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAHAATVRLM 281
           RQQKLAQMLSRLTKIAEE+NVAVYMTNQ   DPGGG+F+SDPKKPAGGHVLAHAATVRLM
Sbjct: 252 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM 311

[Close]

BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-122
Identity = 225/331 (67.98%), Postives = 259/331 (78.25%), Query Frame = 0


Query: 3   LATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 62
           +A  K  ++  QLQ+++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 63  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------- 122
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD+L++                   
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 123 -------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPI 182
                                          LP +M GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 183 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 242
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 243 RGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAHA 281
           RGELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQ   DPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-122
Identity = 225/331 (67.98%), Postives = 259/331 (78.25%), Query Frame = 0


Query: 3   LATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 62
           +A  K  ++  QLQ+++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 63  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------- 122
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD+L++                   
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 123 -------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPI 182
                                          LP +M GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 183 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 242
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 243 RGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAHA 281
           RGELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQ   DPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1IBC8 (meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.5e-157
Identity = 298/351 (84.90%), Postives = 298/351 (84.90%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 299
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A0A0L5D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.9e-155
Identity = 298/388 (76.80%), Postives = 307/388 (79.12%), Query Frame = 0


Query: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65
           L+AEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 100 LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 159

Query: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR---------------------- 125
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                      
Sbjct: 160 KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 219

Query: 126 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 185
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 220 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAER 279

Query: 186 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 245
           FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 280 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 339

Query: 246 LAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAHAATV 305
           LAERQQKLAQMLSRLTKIAEE+NVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 340 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 399

Query: 306 RLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFLVDKAEEKRLHLSHNF 340
           RLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH       FL           S N+
Sbjct: 400 RLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHLTLPFSRFL----------KSSNY 459

[Close]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1IA86 (meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.8e-146
Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 281
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1G745 (meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451472 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.8e-146
Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 281
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.1e-145
Identity = 277/340 (81.47%), Postives = 281/340 (82.65%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 289
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022974436.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 564.3 bits (1453), Expect = 7.2e-157
Identity = 298/351 (84.90%), Postives = 298/351 (84.90%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 299
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. NCBI nr
Match: KAG6597413.1 (hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155
Identity = 296/351 (84.33%), Postives = 296/351 (84.33%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 299
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 2.7e-148
Identity = 284/349 (81.38%), Postives = 288/349 (82.52%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 298
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022947681.1 (meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 meiotic recombination protein DMC1 homolog isoform X2 [Cucurbita maxima] >XP_023540848.1 meiotic recombination protein DMC1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 5.7e-146
Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR----------------- 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR                 
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 ---------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIV 180
                                            LPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLA 281
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

[Close]

BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia])

HSP 1 Score: 524.6 bits (1350), Expect = 6.3e-145
Identity = 277/340 (81.47%), Postives = 281/340 (82.65%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 289
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQ   DPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-129
Identity = 237/331 (71.60%), Postives = 268/331 (80.97%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           M+A+LKAEE S Q+Q+VERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLR------------------ 121
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSD L++                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 122 --------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
                                           LPTNM+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQ---DPGGGVFVSDPKKPAGGHVLAH 280
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQ   DPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

[Close]

BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-61
Identity = 135/324 (41.67%), Postives = 180/324 (55.56%), Query Frame = 0


Query: 10  EQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 69
           EQ +    V+++D E+       +++L + GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 70  GIKGLSEAKVDKICEAAEKLVNFGYITGSD------------------------------ 129
            IKG+S+AKVDKI EAA KLV  G+ + S                               
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGS 124

Query: 130 --------------------VLLRLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 189
                               V  +LP +  GG GK  YID EGTFRP R++ IA+RFG++
Sbjct: 125 ITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLN 184

Query: 190 PGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 249
              VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ R
Sbjct: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSAR 244

Query: 250 QQKLAQMLSRLTKIAEEYNVAVYMTN----QDPGGGVFVSDPKKPAGGHVLAHAATVRLM 280
           Q  LA+ L  L K+A+E+ VAV +TN    Q  G  +F     KP GG+++AHA T RL 
Sbjct: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLA 304

[Close]

BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 79.3 bits (194), Expect = 6.6e-15
Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 100 VLLRLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMD 159
           V +++P    G  GK  YIDTEG+F  +R + IAE                    +  M 
Sbjct: 145 VNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMK 204

Query: 160 PGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAE 219
           P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+
Sbjct: 205 PEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQ 264

Query: 220 RQQKLAQMLSRLTKIAEEYNVAVYMTNQDPGGGVFVSDPKKPAGGHVLAHAATVRLMFRK 279
           R + L++M  +  K+A+++++AV + NQ        S     A G   +H+ T R++   
Sbjct: 265 RTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL-Y 324

[Close]

BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 79.3 bits (194), Expect = 6.6e-15
Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 100 VLLRLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMD 159
           V +++P    G  GK  YIDTEG+F  +R + IAE                    +  M 
Sbjct: 169 VNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMK 228

Query: 160 PGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAE 219
           P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+
Sbjct: 229 PEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQ 288

Query: 220 RQQKLAQMLSRLTKIAEEYNVAVYMTNQDPGGGVFVSDPKKPAGGHVLAHAATVRLMFRK 279
           R + L++M  +  K+A+++++AV + NQ        S     A G   +H+ T R++   
Sbjct: 289 RTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL-Y 348

[Close]

BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 49.3 bits (116), Expect = 7.3e-06
Identity = 30/137 (21.90%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 103 RLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYT 162
           +LP +  G NG   Y+ +E  F   R+  ++  F     ++         D++     ++
Sbjct: 64  QLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHS 123

Query: 163 YEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSR 222
            +H  +++  +   +       P KL+++DS+ ALFR +F     +L +R     ++  +
Sbjct: 124 VDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGK 183

Query: 223 LTKIAEEYNVAVYMTNQ 227
           L ++A ++++A+ +TNQ
Sbjct: 184 LKQLASKFDLAIVITNQ 200

The following BLAST results are available for this feature:

BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	7.8e-138	77.11	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	1.5e-128	71.60	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	8.9e-126	72.62	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	3.5e-122	67.98	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	3.5e-122	67.98	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of CmaCh06G013660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBC8	3.5e-157	84.90	meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A0A0L5D5	1.9e-155	76.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1	[more]
A0A6J1IA86	2.8e-146	83.78	meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1G745	2.8e-146	83.78	meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1CCE5	3.1e-145	81.47	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]

BLAST of CmaCh06G013660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974436.1	7.2e-157	84.90	meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima]	[more]
KAG6597413.1	1.4e-155	84.33	hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_031739053.1	2.7e-148	81.38	meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]	[more]
XP_022947681.1	5.7e-146	83.78	meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 ...	[more]
XP_022138203.1	6.3e-145	81.47	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica chara...	[more]

BLAST of CmaCh06G013660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	1.0e-129	71.60	DNA repair (Rad51) family protein	[more]
AT5G20850.1	6.1e-61	41.67	RAS associated with diabetes protein 51	[more]
AT2G45280.1	6.6e-15	30.35	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	6.6e-15	30.35	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	7.3e-06	21.90	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	GENE3D	1.10.150.20		coord: 10..93 e-value: 3.9E-30 score: 105.6
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 103..282
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 16..103
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 16..103
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 103..282
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 100..280 e-value: 3.5E-76 score: 255.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 99..301 e-value: 2.3E-55 score: 189.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 104..279
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 91..227 score: 22.718016
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 230..279 score: 15.767197
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 100..279 e-value: 1.52233E-92 score: 274.076
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 25..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013660.1	CmaCh06G013660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000794	condensed nuclear chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding