
CmaCh06G013660 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTCGCAACGCTCAAGTGAGTTAGAAATTTGTTCTCGTTATCTTTCGTTTTCAAATTGTAACAATTACTTCTTAATCTATCCGTCGCATTCTCTCTCATTTTGTCGCTGTGATGTTGCTCAGAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACGTAAGTTTCAGAGCTTATAACTTATAATCAAGTTATGGTTTCGCTATTCAAAGAATTTCCTCGCTGACTCTTGTTTTGTGAAGTTCAAACAAAACTTGATTTCGTGACATTCTATCTTAGTGATTTGCTTGTTGACCTCGAGGTTGATTTGAAAAACTCCAATGCTAATCGATTTTCTTTTCTCCGAAGAGATATGAGATCGCTGATACGGCATCACGGAATCTCATTCGATTGATTCATCAGCAATTTAATTTAGTGATCCTTTCATTTCGCGATAGCCTTGCATCCAGTTTAGCTAGGTTTATTTTTTGTAGTGGCCTATTTTCTCAAGGCATGCAATTCTACCAGAGTTTTGCTAAAGTCGAGGGGAAGATGCAACTAGTTTTAGCCATCAACTAACTATCATGCTGTACTGTTGTTCCACTACATCTGATAGAGTTCCTATGGAATTTTCTGTGCAGTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGGTAGAACAATTCTTACATCCGATTCTATATATTCTGAATTTGATGTAATTATAGTGACCAGGGGATTTGTATCTTAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGGTCAGCGACTCAATCACCACTTCTGTTATCCACGATGCGTGCAATGGTTTACACAATGATATCAAAATGCGATGAAGTCCAGCTTTTCTTCAATTAACAGTTATTATTTGTCTGTTGTTTTTCAGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGGTAAGCTGCTTCTGTTTTTTATTGGTAACAAATGGAGTGTAACCAAATAGATCCATACTTCACCAAAATGTACAGTTCGCATAGTCTCCCTTTCCTTTCCCGCATGCTATAAGTTTCGCGTTCGGAAACAACTGTGTACGATTACCTTTAGTTTTTCTTGTAGCTCCTATAAGTTCAAGATATCTTCTAGTAAAATACTGTCCGTCATGAAATGCAGACTGAGACCTTGATTTTTGTTTGTAGAGAAAGTCTGTAGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGATTTACCACGTTCCTTTTTTCACTATCTCACCAATCATAAGCATTAAATATTGCTTTAATTCTTTCCAAAAGGTGGAATTGAAACTCTAGCGATCACGGAAGCTTTTGGAGAATTCAGGTGAGAATGCATATGTTAAAAGGCGCTTCAATTTTGTTTATTGAAAATCGAAGTCCCGTATTTAAATTTCCGTTCTCCTCTGACCTCGTTAAACTAATGCTAGGTCCGGGAAAACGCAACTCGCGCATACTCTATGTGTCTCTACGCAGGTAATCTACGCCTCATCTGAACATTCATTGGGGTGCAATAGTCTTGTTCCTTTTTTCGGTTCTCAGGTCGATGGAATTTTATTAGTTACTTACAGAAATCGTTTTGACACCGTCCAAATATAACTTATGCCTTTCACTCTCCTGGCACCTGTTATAAAGCTTACTCATACTAGTCTCCAGAGAAAGTCAAGTGCCCACAAAATAGTTATGGAATTACAATTGAGATTGTATTTCAGAAAACCTGGAAGCATATACTTGTTCGGCTTCGCATCTGATCTTTAAAATTGAGTTCGATTTATGTAATGCTATATTTGGTAATATATGTATTCAAAGAAAAACTCAGGTTTACTTATCTTTCTTATAAATCTCGTAAGTACTTAGCGCCTCTTTAGCTGCATCAAATCTGATAACATCTTAACGATTGTGCTTGGCGTTGGCCTTCGCAGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTGTATCCTCTTTTGAAGCTTCTTTTATCATGTCGTTATCGTGGCATGTCTAGAGAATTGAAATGATTATCTTCAGAGATGTTCCCCTTTTCAATATGTCCTCTCCTTAACCACACGCACCTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATGTAAGCACCATTCTTTTGCATATAGCTCCTTTCAACCAGATCACAAATCTTTTATTAATTTGCTGCTAATGAAATAGATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGGTGAGTCACCTGGTAACTTGTAATTCAAATGTCAAAAACTATGTTGCCTGACATACATTCTATCTCTTAATTTCAGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGGTCGAATCCTATAGACTTCAACAGACGTCTTAGAATTTAATTTCCCTATCTAAGTCTCACCTGTCACCTTGTTTCATCAATTATGACACAAGCTGGTTGTCAAGTGCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGGTAGCGATTGAACTTTATGGAAGTCGTTTCTAGTGCTTAATCATCTCATTCAGGCAATCCATGACAGACATGTTAGCTCAATTTATGGTCAGAATATTTTGACCTTGGTACTTCTTGTATTAGCTGGATTGACTGAGACAAAATCGTTTGCTGTTGAGTACACAAAACTGGTGTTTATCATTCAAAATGTTGGTCACTGAACGCGCTATCTGTCTTGTTGACAACAGTTGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGGTATAAACATCGAACCCATGAATCTCAACGATTTCCGAAATCATCGAACCAATGATGTAAGCAAGCAGTAAGTCCTACAATTCTACTGCACTCATATCACTACATAAAAATTGTACTTGTTAAACATTGTAGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGGTTGAAATGTTTTAAACTTTTCATCTAGTTACTGGATACATATTTTTATCTTCTAGTGACAGTATGTAA ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGTATGTAA ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATCGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATCGACAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTGCTCAGGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAGGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCCGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTCGATGCTCCTAATCTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCACGTCACACTTCATCACCTTCATTTATCATTTTCTGGTTGATAAAGCAGAAGAGAAAAGGCTACACCTTTCACACAATTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGCCTCATGTGGTGCTGGAAAATCAAAGGAAACACAGTATGTAA MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQDPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFLVDKAEEKRLHLSHNFSLTEPRFSDNTRGHCRCKGLTPHVVLENQRKHSM Homology
BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 7.8e-138 Identity = 256/332 (77.11%), Postives = 273/332 (82.23%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2) HSP 1 Score: 460.7 bits (1184), Expect = 1.5e-128 Identity = 237/331 (71.60%), Postives = 268/331 (80.97%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 8.9e-126 Identity = 236/325 (72.62%), Postives = 257/325 (79.08%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-122 Identity = 225/331 (67.98%), Postives = 259/331 (78.25%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-122 Identity = 225/331 (67.98%), Postives = 259/331 (78.25%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1IBC8 (meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 3.5e-157 Identity = 298/351 (84.90%), Postives = 298/351 (84.90%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A0A0L5D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 1.9e-155 Identity = 298/388 (76.80%), Postives = 307/388 (79.12%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1IA86 (meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.8e-146 Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1G745 (meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451472 PE=3 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.8e-146 Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0
BLAST of CmaCh06G013660 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 3.1e-145 Identity = 277/340 (81.47%), Postives = 281/340 (82.65%), Query Frame = 0
BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022974436.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima]) HSP 1 Score: 564.3 bits (1453), Expect = 7.2e-157 Identity = 298/351 (84.90%), Postives = 298/351 (84.90%), Query Frame = 0
BLAST of CmaCh06G013660 vs. NCBI nr
Match: KAG6597413.1 (hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155 Identity = 296/351 (84.33%), Postives = 296/351 (84.33%), Query Frame = 0
BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 535.8 bits (1379), Expect = 2.7e-148 Identity = 284/349 (81.38%), Postives = 288/349 (82.52%), Query Frame = 0
BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022947681.1 (meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 meiotic recombination protein DMC1 homolog isoform X2 [Cucurbita maxima] >XP_023540848.1 meiotic recombination protein DMC1 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528.1 bits (1359), Expect = 5.7e-146 Identity = 279/333 (83.78%), Postives = 280/333 (84.08%), Query Frame = 0
BLAST of CmaCh06G013660 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia]) HSP 1 Score: 524.6 bits (1350), Expect = 6.3e-145 Identity = 277/340 (81.47%), Postives = 281/340 (82.65%), Query Frame = 0
BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein ) HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-129 Identity = 237/331 (71.60%), Postives = 268/331 (80.97%), Query Frame = 0
BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 ) HSP 1 Score: 232.3 bits (591), Expect = 6.1e-61 Identity = 135/324 (41.67%), Postives = 180/324 (55.56%), Query Frame = 0
BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C ) HSP 1 Score: 79.3 bits (194), Expect = 6.6e-15 Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 0
BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C ) HSP 1 Score: 79.3 bits (194), Expect = 6.6e-15 Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 0
BLAST of CmaCh06G013660 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) ) HSP 1 Score: 49.3 bits (116), Expect = 7.3e-06 Identity = 30/137 (21.90%), Postives = 67/137 (48.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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