CmaCh06G005940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G005940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box/kelch-repeat protein SKIP25-like
Location	Cma_Chr06: 2872305 .. 2873426 (+)
RNA-Seq Expression	CmaCh06G005940
Synteny	CmaCh06G005940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCACCACCACTTCCACCTCCTCCAAGCGCAATAAACTGGCTCTCCACCACCACCGCCACTGCCCCTCTCCGCCGCTCCTCCCCGGCCTACCTGATCACGTAGCCCAGTTATGTCTATCCCGCCTCCCCCCTTCCCTCCTCTTCTCCGTCAGCCGCTCATGGCGGCGCCTCATCTACTCCCCTGCCTTCCCCCCTTATTTCTCCATCTACGCCCTTCTTTCTTCCTCCCCCAATTCCCTCGATTTCTTCACCTTCGATCCAATCTCATCGAAATGGAACCGCCTCCCTCCGCCGCCTAATCCTCCTCCTCTAGATCTGATGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCTGTCCAATCTCTCGCCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACTCAAGACCTCCTCCCTGCCCTGCCTCGCCCTTTAATTTTCTCCCCTGTTTCCAATTCCTGGCAATTCGGTCCTCCCCTCACAACCCCACGTCGCTGGTGCGCTGCCGGCGCACTCCGGGGCTCCGTCTACGTCGCTAGCGGAATTGGGTCGTTCTTCTCCACCGACGTGGCTCGCTCTGTTGAGAGATGGGATTTGAAAAAACCCAGAGGAAGAGGAGGCGATTGGGAGAAGGTTAGTGGATTGAAGGATCGGAGATTCAGTAGAGACGCCATTGATGCTGTGGGGTGGAGGGGGAAGCTTTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAGAGGGATGTGTGGGAGGAGATGCCGGAGGGGATGGTCAGAGGGTGGAGAGGGCCGGTGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTCGGTGGATGTTTGAGAAAGTATAATCCGGTGGGGGATGTGTGGGAACAAGTAATTCAGTCTAATAGGTTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGTGGCAGAGTCTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATCGTGGTGGTGGACGTGGTAGCGTCGCCGCCGTGGCTGAGAGTTGAGCCGACGCCACCGGGGATCGAGGTGGTCGCCGTCCACGTGCTGCCGAGAATGAGTGCACCGGAGTCATGA

mRNA sequence

ATGGTCACCACCACTTCCACCTCCTCCAAGCGCAATAAACTGGCTCTCCACCACCACCGCCACTGCCCCTCTCCGCCGCTCCTCCCCGGCCTACCTGATCACGTAGCCCAGTTATGTCTATCCCGCCTCCCCCCTTCCCTCCTCTTCTCCGTCAGCCGCTCATGGCGGCGCCTCATCTACTCCCCTGCCTTCCCCCCTTATTTCTCCATCTACGCCCTTCTTTCTTCCTCCCCCAATTCCCTCGATTTCTTCACCTTCGATCCAATCTCATCGAAATGGAACCGCCTCCCTCCGCCGCCTAATCCTCCTCCTCTAGATCTGATGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCTGTCCAATCTCTCGCCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACTCAAGACCTCCTCCCTGCCCTGCCTCGCCCTTTAATTTTCTCCCCTGTTTCCAATTCCTGGCAATTCGGTCCTCCCCTCACAACCCCACGTCGCTGGTGCGCTGCCGGCGCACTCCGGGGCTCCGTCTACGTCGCTAGCGGAATTGGGTCGTTCTTCTCCACCGACGTGGCTCGCTCTGTTGAGAGATGGGATTTGAAAAAACCCAGAGGAAGAGGAGGCGATTGGGAGAAGGTTAGTGGATTGAAGGATCGGAGATTCAGTAGAGACGCCATTGATGCTGTGGGGTGGAGGGGGAAGCTTTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAGAGGGATGTGTGGGAGGAGATGCCGGAGGGGATGGTCAGAGGGTGGAGAGGGCCGGTGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTCGGTGGATGTTTGAGAAAGTATAATCCGGTGGGGGATGTGTGGGAACAAGTAATTCAGTCTAATAGGTTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGTGGCAGAGTCTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATCGTGGTGGTGGACGTGGTAGCGTCGCCGCCGTGGCTGAGAGTTGAGCCGACGCCACCGGGGATCGAGGTGGTCGCCGTCCACGTGCTGCCGAGAATGAGTGCACCGGAGTCATGA

Coding sequence (CDS)

ATGGTCACCACCACTTCCACCTCCTCCAAGCGCAATAAACTGGCTCTCCACCACCACCGCCACTGCCCCTCTCCGCCGCTCCTCCCCGGCCTACCTGATCACGTAGCCCAGTTATGTCTATCCCGCCTCCCCCCTTCCCTCCTCTTCTCCGTCAGCCGCTCATGGCGGCGCCTCATCTACTCCCCTGCCTTCCCCCCTTATTTCTCCATCTACGCCCTTCTTTCTTCCTCCCCCAATTCCCTCGATTTCTTCACCTTCGATCCAATCTCATCGAAATGGAACCGCCTCCCTCCGCCGCCTAATCCTCCTCCTCTAGATCTGATGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCTGTCCAATCTCTCGCCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACTCAAGACCTCCTCCCTGCCCTGCCTCGCCCTTTAATTTTCTCCCCTGTTTCCAATTCCTGGCAATTCGGTCCTCCCCTCACAACCCCACGTCGCTGGTGCGCTGCCGGCGCACTCCGGGGCTCCGTCTACGTCGCTAGCGGAATTGGGTCGTTCTTCTCCACCGACGTGGCTCGCTCTGTTGAGAGATGGGATTTGAAAAAACCCAGAGGAAGAGGAGGCGATTGGGAGAAGGTTAGTGGATTGAAGGATCGGAGATTCAGTAGAGACGCCATTGATGCTGTGGGGTGGAGGGGGAAGCTTTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAGAGGGATGTGTGGGAGGAGATGCCGGAGGGGATGGTCAGAGGGTGGAGAGGGCCGGTGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTCGGTGGATGTTTGAGAAAGTATAATCCGGTGGGGGATGTGTGGGAACAAGTAATTCAGTCTAATAGGTTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGTGGCAGAGTCTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATCGTGGTGGTGGACGTGGTAGCGTCGCCGCCGTGGCTGAGAGTTGAGCCGACGCCACCGGGGATCGAGGTGGTCGCCGTCCACGTGCTGCCGAGAATGAGTGCACCGGAGTCATGA

Protein sequence

MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVVAVHVLPRMSAPES

Homology

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BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot
Match: Q8GX29 (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.0e-95
Identity = 185/360 (51.39%), Postives = 245/360 (68.06%), Query Frame = 0


Query: 27  LLPGLPDHVAQLCLSRL-PPSLLFSVSRSWRRLIYSPAFPPYFSIYALLSSSPN------ 86
           L+ GLPDH++++CLS +  PSLL +V   WRRL+YSP FP + S+YAL   S +      
Sbjct: 35  LIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDSTSDTGRVN 94

Query: 87  -SLDFFTFDPISSKWNRLPPPPNPPPLD-LMIHHPSFLSRHLPVQSLAVSGHLLLLAATT 146
            S+ F  F+P+SSKW  LPPPP  PPL  ++  HPSF+S +LP+Q ++ +G L+L+A + 
Sbjct: 95  PSVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSN 154

Query: 147 QDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIGSFFSTDVARSV 206
           Q L PA+  PLIF P+S+SW  GP + +PRRWCA GA  G++Y+ASGI S FS+ VA+SV
Sbjct: 155 QQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSV 214

Query: 207 ERWDLKKPRGRGG--DWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDL 266
           E+ DL +        +WEK+  ++D RFSR+AIDAVG+R KL MVNVKGDA KEG +YD+
Sbjct: 215 EKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNVKGDAVKEGAIYDV 274

Query: 267 ERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVGDVWEQVI----QSNR 326
            +D WE MPE M+ GWRGPVAAM+EE +Y VDE  G +RKY+     W +V+        
Sbjct: 275 VKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREWREVVVVEGGEEM 334

Query: 327 LKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVVAVHVLPRMSAP 372
           LKGA Q+ A  G++CVV G   G+IVVVDV A P  +     P G+E V+VHVLPRMS P
Sbjct: 335 LKGATQVTADSGKLCVVTGD--GKIVVVDVAAEPAKIWNVEIPDGLEPVSVHVLPRMSQP 392

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BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot
Match: Q8LAW2 (F-box protein AFR OS=Arabidopsis thaliana OX=3702 GN=AFR PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 3.7e-16
Identity = 92/354 (25.99%), Postives = 142/354 (40.11%), Query Frame = 0


Query: 4   TTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLP---PSLLFSVSRSWRRLIY 63
           TTS  +  N  A    R   S PL+ GLP+ +A+LCL RLP    +L  SVS SW + I 
Sbjct: 6   TTSNINTINDQAEEETR-TKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTIT 65

Query: 64  SPAF----------PPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIH 123
           +P F           PY  ++A  + S   + + + D  S +W  LPP PN       I 
Sbjct: 66  NPRFLFSKQSLSISSPYLFVFA-FNKSTARIQWQSLDLASGRWFVLPPMPNS---FTKIS 125

Query: 124 HPSFLSRHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWC 183
            P  LS      S+   G L +L     +        ++++ ++N W    P+ +PR + 
Sbjct: 126 SPHALS----CASMPRQGKLFVLGGGDVN-----RSAVVYTALTNRWSCISPMMSPRTYF 185

Query: 184 AAGALRGSVYVASG-IGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGL-------KDRR 243
            +G + G +    G +G   + +    VE +D          W  V  L           
Sbjct: 186 VSGNVNGKIMAVGGSVGG--NGEATTEVESYD-----PDNDTWTVVKKLPMVLAKYDSAV 245

Query: 244 FSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEE 303
             ++     GW             P  G VYD +   W EM  GM  GW G V+ +  + 
Sbjct: 246 IGKEMCVTEGWAWPFMF-------PPMGQVYDSDEGTWREMSGGMKEGWTG-VSVVIRDR 305

Query: 304 MYVVDEVGGC-LRKYNPVGDVWEQV----IQSNRLKGAVQMAAGGGRVCVVCGG 332
           ++V+ E G   ++ Y    D W  V    +Q  +++    +     RV VV  G
Sbjct: 306 LFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASG 330

[Close]

BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.0e-15
Identity = 78/297 (26.26%), Postives = 117/297 (39.39%), Query Frame = 0


Query: 25  PPLLPGLPDHVAQLCLSRLPPS---LLFSVSRSWRRLIYSPAFPPYFS--------IYAL 84
           PPLLPGLPD +A  CL R+P +    L  V + W RL     F             +Y  
Sbjct: 76  PPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVF 135

Query: 85  LSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLLL 144
                  + + TFDPIS  W  LPP P               S  +      +SG  L L
Sbjct: 136 KRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGCHLYL 195

Query: 145 AATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIGSFFSTDV 204
                 L  ++ R + ++  +N W   P +   R +     +   +YVA G        +
Sbjct: 196 FGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTL 255

Query: 205 ARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVY 264
            RS E +D  K R     W   S + D   +   +  V +  K  +  +          Y
Sbjct: 256 -RSAEVYDPNKNR-----W---SFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSEAY 315

Query: 265 DLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGC-LRKYNPVGDVWEQVIQS 310
           D E + W  + +GMV GWR P  +++   +Y +D   GC LR ++   D W + + S
Sbjct: 316 DPEVNSWSPVSDGMVAGWRNPCTSLN-GRLYGLDCRDGCKLRVFDESTDSWNKFMDS 350

[Close]

BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-11
Identity = 87/369 (23.58%), Postives = 138/369 (37.40%), Query Frame = 0


Query: 2   VTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPP---SLLFSVSRSWRRL 61
           V  +S S KR K++  +        L+P LPD ++   L+RLP    S +  VSR WR  
Sbjct: 19  VECSSESRKRRKISSENDEE-ECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSA 78

Query: 62  IYSPAFPPYFS--------IYALLSSSPNSLDFFTFDPISSKWNRLPPPP---------- 121
           + +                +Y L     + L ++  DP+S+KW RLPP P          
Sbjct: 79  VSTSEVYSLRKELGRTEEWLYVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRK 138

Query: 122 --------NPPPLDLMIHHPSFLSRHLPVQSL--------AVSGHLLLLAATTQDLLPAL 181
                     P  ++     SFL R    + +        AV G L ++   ++     +
Sbjct: 139 SLSGLWNMITPSFNVGAIVRSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTV 198

Query: 182 PRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIG-SFFSTDVARSVERWDLK 241
                F P+ NSW     +   R +   G L   +YV  G+          +S E +D  
Sbjct: 199 SCVWRFDPILNSWSEVSSMLASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPS 258

Query: 242 KPRGRGGDWEKVSGLK-------DRRFSRDAIDAVG-----WRGKLCMVNVKGDAP---- 301
                   W +V  +           F  D +  +      + G+LC+       P    
Sbjct: 259 TDA-----WSEVPSMPFSKAQVLPNAFLADLLKPIATGMTCYNGRLCVPQSLYSWPFFVD 318

Query: 302 KEGLVYDLERDVWEEMPEGMVRGWRG-----PVAAMDEEEMYVVDE----VGGCLRKYNP 308
             G VYD E ++W EMP GM  GW        ++ + + E+Y  D       G ++ Y+ 
Sbjct: 319 VGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVDGELYAFDPSSSMENGKIKVYDQ 378

[Close]

BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot
Match: Q9C6Z0 (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10
Identity = 74/299 (24.75%), Postives = 112/299 (37.46%), Query Frame = 0


Query: 26  PLLPGLPDHVAQLCLSRLPPS-------------LLFSVSRSWRRLIYSPAFPPYFSIYA 85
           PL+PGLPD VA  CL R+P               LLF    ++        F   +    
Sbjct: 52  PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVV 111

Query: 86  LLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLL 145
             S     + +   D  +  W+ +P     P  D +  H  F S  +P +     G + +
Sbjct: 112 GFSRCTGKIQWKVLDLRNLTWHEIPA---MPCRDKVCPH-GFRSVSMPRE-----GTMFV 171

Query: 146 LAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASG-IGSFFST 205
                 D    L   L +  V N W     + T R + A+G + G +Y A G     +  
Sbjct: 172 CGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYEL 231

Query: 206 DVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVN---VKGDAPK 265
           D A  +   D        G+W  VS +     S    D     GKL +            
Sbjct: 232 DCAEVLNPLD--------GNWRPVSNMVAHMAS---YDTAVLNGKLLVTEGWLWPFFVSP 291

Query: 266 EGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGC-LRKYNPVGDVWEQV 307
            G VYD   D WE M  G+  GW G  + +  + +++V E+    ++ Y+PV D WE +
Sbjct: 292 RGQVYDPRTDQWETMSMGLREGWTG-TSVVIYDRLFIVSELERMKMKVYDPVTDSWETI 329

[Close]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL
Match: A0A6J1KU65 (F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC111498701 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 5.9e-219
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60
           MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY
Sbjct: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60

Query: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120
           SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP
Sbjct: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120

Query: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180
           VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY
Sbjct: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180

Query: 181 VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV 240
           VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV
Sbjct: 181 VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV 240

Query: 241 NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG 300
           NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG
Sbjct: 241 NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG 300

Query: 301 DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV 360
           DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV
Sbjct: 301 DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV 360

Query: 361 AVHVLPRMSAPES 374
           AVHVLPRMSAPES
Sbjct: 361 AVHVLPRMSAPES 373

[Close]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL
Match: A0A6J1FAD8 (F-box/kelch-repeat protein SKIP25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443540 PE=4 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.3e-210
Identity = 360/374 (96.26%), Postives = 367/374 (98.13%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60
           MVT TS SSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY
Sbjct: 1   MVTATSPSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60

Query: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120
           SPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP
Sbjct: 61  SPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120

Query: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180
           VQSLAVSGHLLLLAATTQ+LLPALPRPLIFSPVSNSWQFGPPL TPRRWCAAGALRGSVY
Sbjct: 121 VQSLAVSGHLLLLAATTQNLLPALPRPLIFSPVSNSWQFGPPLITPRRWCAAGALRGSVY 180

Query: 181 VASGIGSFFSTDVARSVERWDLKKPR-GRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM 240
           VASGIGSFFSTDVARSVERWDLKKPR G GGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM
Sbjct: 181 VASGIGSFFSTDVARSVERWDLKKPRGGGGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM 240

Query: 241 VNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPV 300
           VNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVVDE GGCLR+YNPV
Sbjct: 241 VNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVVDEGGGCLRRYNPV 300

Query: 301 GDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEV 360
           GD+WEQVIQSNRLKGAVQMAAGGGRVC+VCGGSRGEIVVVDVVASPPWLRVEPTPPG+EV
Sbjct: 301 GDLWEQVIQSNRLKGAVQMAAGGGRVCIVCGGSRGEIVVVDVVASPPWLRVEPTPPGMEV 360

Query: 361 VAVHVLPRMSAPES 374
           VAVHVLPRMSAPES
Sbjct: 361 VAVHVLPRMSAPES 374

[Close]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL
Match: A0A6J1FF93 (F-box/kelch-repeat protein SKIP25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443540 PE=4 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.0e-208
Identity = 360/387 (93.02%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHH-------------HRHCPSPPLLPGLPDHVAQLCLSRLPPSL 60
           MVT TS SSKRNKLALHH             HRHCPSPPLLPGLPDHVAQLCLSRLPPSL
Sbjct: 1   MVTATSPSSKRNKLALHHHHHHHHHHRHRHRHRHCPSPPLLPGLPDHVAQLCLSRLPPSL 60

Query: 61  LFSVSRSWRRLIYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL 120
           LFSVSRSWRRLIYSPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL
Sbjct: 61  LFSVSRSWRRLIYSPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL 120

Query: 121 MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPR 180
           MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQ+LLPALPRPLIFSPVSNSWQFGPPL TPR
Sbjct: 121 MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQNLLPALPRPLIFSPVSNSWQFGPPLITPR 180

Query: 181 RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPR-GRGGDWEKVSGLKDRRFSRD 240
           RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPR G GGDWEKVSGLKDRRFSRD
Sbjct: 181 RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPRGGGGGDWEKVSGLKDRRFSRD 240

Query: 241 AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVV 300
           AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVV
Sbjct: 241 AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVV 300

Query: 301 DEVGGCLRKYNPVGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPP 360
           DE GGCLR+YNPVGD+WEQVIQSNRLKGAVQMAAGGGRVC+VCGGSRGEIVVVDVVASPP
Sbjct: 301 DEGGGCLRRYNPVGDLWEQVIQSNRLKGAVQMAAGGGRVCIVCGGSRGEIVVVDVVASPP 360

Query: 361 WLRVEPTPPGIEVVAVHVLPRMSAPES 374
           WLRVEPTPPG+EVVAVHVLPRMSAPES
Sbjct: 361 WLRVEPTPPGMEVVAVHVLPRMSAPES 387

[Close]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL
Match: A0A6J1E5V4 (F-box/kelch-repeat protein SKIP25-like OS=Cucurbita moschata OX=3662 GN=LOC111430994 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.4e-174
Identity = 309/375 (82.40%), Postives = 331/375 (88.27%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLAL--HHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRL 60
           MVT  + + KR+KLAL  HHHRH PSPPLLPGLPD VAQLCL  LPPSLLFSV RSWRRL
Sbjct: 1   MVTAAAPTPKRSKLALHHHHHRHRPSPPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRL 60

Query: 61  IYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRH 120
           +YSP+FPP+FS+YALLSSSP+S+DFF FDPISSKW  LPP PNPP L L+IHHPSFLSRH
Sbjct: 61  LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH 120

Query: 121 LPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGS 180
           LPVQSLAVSGHLLLLAATT +LLPALPRPL+FSP+SNSW+F PPL TPRRWCAAGALRGS
Sbjct: 121 LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGS 180

Query: 181 VYVASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLC 240
           VYVASGIGSFFSTDVARSVERWDLK     GG WEKVSGLKD RFSRDA DAVGWRGKLC
Sbjct: 181 VYVASGIGSFFSTDVARSVERWDLKPI--DGGAWEKVSGLKDGRFSRDATDAVGWRGKLC 240

Query: 241 MVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNP 300
           MVNVKGDA KEGLVYDLERD WEEM EGM+ GWRGPVA M+EEEMYVVDEV G LR+Y+P
Sbjct: 241 MVNVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDP 300

Query: 301 VGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIE 360
             D WE+V +SNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASPP L VE TPPG+E
Sbjct: 301 ERDFWEEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGME 360

Query: 361 VVAVHVLPRMSAPES 374
           VVAVHVLPRMSAP+S
Sbjct: 361 VVAVHVLPRMSAPKS 373

[Close]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL
Match: A0A6J1HK01 (F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC111465215 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.3e-173
Identity = 306/373 (82.04%), Postives = 328/373 (87.94%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60
           MVT  + + KR+KLALH H H PSPPLLPGLPD VAQLCLS LPPSLLFSV RSWRRL+Y
Sbjct: 1   MVTAATPTPKRSKLALHPHHHRPSPPLLPGLPDDVAQLCLSHLPPSLLFSVCRSWRRLLY 60

Query: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120
           SP+FPP+FS+YALLSSSP+S+DFF FDPISSKW  LPP PNPP L L+IHHPSFLSRHLP
Sbjct: 61  SPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLP 120

Query: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180
           VQSLAVSGHLLLLAATT +LLPALPRPL+FSP+SNSW+F PPL TPRRWCAAG+LRGSVY
Sbjct: 121 VQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGSLRGSVY 180

Query: 181 VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV 240
           VASGIGSFFSTDVARSVERWDLK     GG WEKVSGLKD RFSRDA DAVGWRGKLCMV
Sbjct: 181 VASGIGSFFSTDVARSVERWDLKPI--DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV 240

Query: 241 NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG 300
           NVKGDA KEGLVYDLERD WEEM EGM+ GWRGPVA M+EEEMYVVDEV G LR+Y+P  
Sbjct: 241 NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPER 300

Query: 301 DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV 360
           D WE+V +SNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASPP L VE TPPG+EVV
Sbjct: 301 DFWEEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV 360

Query: 361 AVHVLPRMSAPES 374
           AVHVLPRMS P S
Sbjct: 361 AVHVLPRMSTPRS 371

[Close]

BLAST of CmaCh06G005940 vs. NCBI nr
Match: XP_023005807.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita maxima])

HSP 1 Score: 769.6 bits (1986), Expect = 1.2e-218
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60
           MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY
Sbjct: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60

Query: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120
           SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP
Sbjct: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120

Query: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180
           VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY
Sbjct: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180

Query: 181 VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV 240
           VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV
Sbjct: 181 VASGIGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMV 240

Query: 241 NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG 300
           NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG
Sbjct: 241 NVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVG 300

Query: 301 DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV 360
           DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV
Sbjct: 301 DVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVV 360

Query: 361 AVHVLPRMSAPES 374
           AVHVLPRMSAPES
Sbjct: 361 AVHVLPRMSAPES 373

[Close]

BLAST of CmaCh06G005940 vs. NCBI nr
Match: XP_022937172.1 (F-box/kelch-repeat protein SKIP25-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 741.9 bits (1914), Expect = 2.7e-210
Identity = 360/374 (96.26%), Postives = 367/374 (98.13%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60
           MVT TS SSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY
Sbjct: 1   MVTATSPSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIY 60

Query: 61  SPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120
           SPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP
Sbjct: 61  SPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLP 120

Query: 121 VQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVY 180
           VQSLAVSGHLLLLAATTQ+LLPALPRPLIFSPVSNSWQFGPPL TPRRWCAAGALRGSVY
Sbjct: 121 VQSLAVSGHLLLLAATTQNLLPALPRPLIFSPVSNSWQFGPPLITPRRWCAAGALRGSVY 180

Query: 181 VASGIGSFFSTDVARSVERWDLKKPR-GRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM 240
           VASGIGSFFSTDVARSVERWDLKKPR G GGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM
Sbjct: 181 VASGIGSFFSTDVARSVERWDLKKPRGGGGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCM 240

Query: 241 VNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPV 300
           VNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVVDE GGCLR+YNPV
Sbjct: 241 VNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVVDEGGGCLRRYNPV 300

Query: 301 GDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEV 360
           GD+WEQVIQSNRLKGAVQMAAGGGRVC+VCGGSRGEIVVVDVVASPPWLRVEPTPPG+EV
Sbjct: 301 GDLWEQVIQSNRLKGAVQMAAGGGRVCIVCGGSRGEIVVVDVVASPPWLRVEPTPPGMEV 360

Query: 361 VAVHVLPRMSAPES 374
           VAVHVLPRMSAPES
Sbjct: 361 VAVHVLPRMSAPES 374

[Close]

BLAST of CmaCh06G005940 vs. NCBI nr
Match: KAG6596685.1 (F-box/kelch-repeat protein SKIP25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 736.5 bits (1900), Expect = 1.1e-208
Identity = 360/378 (95.24%), Postives = 368/378 (97.35%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHH----HRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWR 60
           MVT+TS SSKRNKLALHH    HRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWR
Sbjct: 1   MVTSTSPSSKRNKLALHHHHHRHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWR 60

Query: 61  RLIYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLS 120
           RLIYSPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLS
Sbjct: 61  RLIYSPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLS 120

Query: 121 RHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALR 180
           RHLPVQSLAVSGHLLLLAATTQ+LLPALPRPLIFSPVSNSWQFGPPL TPRRWCAAGALR
Sbjct: 121 RHLPVQSLAVSGHLLLLAATTQNLLPALPRPLIFSPVSNSWQFGPPLITPRRWCAAGALR 180

Query: 181 GSVYVASGIGSFFSTDVARSVERWDLKKPRGRG-GDWEKVSGLKDRRFSRDAIDAVGWRG 240
           GSVYVASGIGSFFSTDVARSVERWDLKKPRG G GDWEKVSGLKDRRFSRDAIDAVGWRG
Sbjct: 181 GSVYVASGIGSFFSTDVARSVERWDLKKPRGGGRGDWEKVSGLKDRRFSRDAIDAVGWRG 240

Query: 241 KLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRK 300
           KLCMVNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVVDE GGCLR+
Sbjct: 241 KLCMVNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVVDEGGGCLRR 300

Query: 301 YNPVGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPP 360
           YNPVGD+WEQVIQSNRLKGAVQMAAGGGRVC+VCGGSRGEIVVVDVVASPPWLRVEPTPP
Sbjct: 301 YNPVGDLWEQVIQSNRLKGAVQMAAGGGRVCIVCGGSRGEIVVVDVVASPPWLRVEPTPP 360

Query: 361 GIEVVAVHVLPRMSAPES 374
           G+EVVAVHVLPRMSAPES
Sbjct: 361 GMEVVAVHVLPRMSAPES 378

[Close]

BLAST of CmaCh06G005940 vs. NCBI nr
Match: XP_022937163.1 (F-box/kelch-repeat protein SKIP25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 732.6 bits (1890), Expect = 1.7e-207
Identity = 360/387 (93.02%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHH-------------HRHCPSPPLLPGLPDHVAQLCLSRLPPSL 60
           MVT TS SSKRNKLALHH             HRHCPSPPLLPGLPDHVAQLCLSRLPPSL
Sbjct: 1   MVTATSPSSKRNKLALHHHHHHHHHHRHRHRHRHCPSPPLLPGLPDHVAQLCLSRLPPSL 60

Query: 61  LFSVSRSWRRLIYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL 120
           LFSVSRSWRRLIYSPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL
Sbjct: 61  LFSVSRSWRRLIYSPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDL 120

Query: 121 MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPR 180
           MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQ+LLPALPRPLIFSPVSNSWQFGPPL TPR
Sbjct: 121 MIHHPSFLSRHLPVQSLAVSGHLLLLAATTQNLLPALPRPLIFSPVSNSWQFGPPLITPR 180

Query: 181 RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPR-GRGGDWEKVSGLKDRRFSRD 240
           RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPR G GGDWEKVSGLKDRRFSRD
Sbjct: 181 RWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKPRGGGGGDWEKVSGLKDRRFSRD 240

Query: 241 AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVV 300
           AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVV
Sbjct: 241 AIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVV 300

Query: 301 DEVGGCLRKYNPVGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPP 360
           DE GGCLR+YNPVGD+WEQVIQSNRLKGAVQMAAGGGRVC+VCGGSRGEIVVVDVVASPP
Sbjct: 301 DEGGGCLRRYNPVGDLWEQVIQSNRLKGAVQMAAGGGRVCIVCGGSRGEIVVVDVVASPP 360

Query: 361 WLRVEPTPPGIEVVAVHVLPRMSAPES 374
           WLRVEPTPPG+EVVAVHVLPRMSAPES
Sbjct: 361 WLRVEPTPPGMEVVAVHVLPRMSAPES 387

[Close]

BLAST of CmaCh06G005940 vs. NCBI nr
Match: KAG7028220.1 (F-box/kelch-repeat protein SKIP25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 731.5 bits (1887), Expect = 3.7e-207
Identity = 358/377 (94.96%), Postives = 365/377 (96.82%), Query Frame = 0


Query: 1   MVTTTSTSSKRNKLALHH---HRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRR 60
           MVT TS SSKRNKLALHH   HRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRR
Sbjct: 1   MVTATSPSSKRNKLALHHHHRHRHCPSPPLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRR 60

Query: 61  LIYSPAFPPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSR 120
           LIYSPAFPP+FSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSR
Sbjct: 61  LIYSPAFPPFFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSR 120

Query: 121 HLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRG 180
           HLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPL TPRRWCAAGALRG
Sbjct: 121 HLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLITPRRWCAAGALRG 180

Query: 181 SVYVASGIGSFFSTDVARSVERWDLKKPR-GRGGDWEKVSGLKDRRFSRDAIDAVGWRGK 240
           SVYVASGIGSFFSTDVARSVERWDLKK R G GGDWEKVSGLKDRRFSRDAIDAVGWRGK
Sbjct: 181 SVYVASGIGSFFSTDVARSVERWDLKKSRGGGGGDWEKVSGLKDRRFSRDAIDAVGWRGK 240

Query: 241 LCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKY 300
           LCMVNVKGDAPKEGLVYDLERD+WEEMPEGMV GWRGPVAAMDEEEMYVVDE GGCLR+Y
Sbjct: 241 LCMVNVKGDAPKEGLVYDLERDLWEEMPEGMVGGWRGPVAAMDEEEMYVVDEGGGCLRRY 300

Query: 301 NPVGDVWEQVIQSNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPG 360
           NPVGD+WEQV+QSNRLKGAVQMAAGGGRVC+VCGGS GEIVVVDVVASPPWLRVEPTPPG
Sbjct: 301 NPVGDLWEQVLQSNRLKGAVQMAAGGGRVCIVCGGSIGEIVVVDVVASPPWLRVEPTPPG 360

Query: 361 IEVVAVHVLPRMSAPES 374
           +EVVAVHVLPRMSAPES
Sbjct: 361 MEVVAVHVLPRMSAPES 377

[Close]

BLAST of CmaCh06G005940 vs. TAIR 10
Match: AT1G31350.1 (KAR-UP F-box 1 )

HSP 1 Score: 349.7 bits (896), Expect = 2.8e-96
Identity = 185/360 (51.39%), Postives = 245/360 (68.06%), Query Frame = 0


Query: 27  LLPGLPDHVAQLCLSRL-PPSLLFSVSRSWRRLIYSPAFPPYFSIYALLSSSPN------ 86
           L+ GLPDH++++CLS +  PSLL +V   WRRL+YSP FP + S+YAL   S +      
Sbjct: 35  LIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDSTSDTGRVN 94

Query: 87  -SLDFFTFDPISSKWNRLPPPPNPPPLD-LMIHHPSFLSRHLPVQSLAVSGHLLLLAATT 146
            S+ F  F+P+SSKW  LPPPP  PPL  ++  HPSF+S +LP+Q ++ +G L+L+A + 
Sbjct: 95  PSVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSN 154

Query: 147 QDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIGSFFSTDVARSV 206
           Q L PA+  PLIF P+S+SW  GP + +PRRWCA GA  G++Y+ASGI S FS+ VA+SV
Sbjct: 155 QQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSV 214

Query: 207 ERWDLKKPRGRGG--DWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDL 266
           E+ DL +        +WEK+  ++D RFSR+AIDAVG+R KL MVNVKGDA KEG +YD+
Sbjct: 215 EKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNVKGDAVKEGAIYDV 274

Query: 267 ERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGCLRKYNPVGDVWEQVI----QSNR 326
            +D WE MPE M+ GWRGPVAAM+EE +Y VDE  G +RKY+     W +V+        
Sbjct: 275 VKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREWREVVVVEGGEEM 334

Query: 327 LKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPWLRVEPTPPGIEVVAVHVLPRMSAP 372
           LKGA Q+ A  G++CVV G   G+IVVVDV A P  +     P G+E V+VHVLPRMS P
Sbjct: 335 LKGATQVTADSGKLCVVTGD--GKIVVVDVAAEPAKIWNVEIPDGLEPVSVHVLPRMSQP 392

[Close]

BLAST of CmaCh06G005940 vs. TAIR 10
Match: AT2G24540.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-17
Identity = 92/354 (25.99%), Postives = 142/354 (40.11%), Query Frame = 0


Query: 4   TTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLP---PSLLFSVSRSWRRLIY 63
           TTS  +  N  A    R   S PL+ GLP+ +A+LCL RLP    +L  SVS SW + I 
Sbjct: 6   TTSNINTINDQAEEETR-TKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTIT 65

Query: 64  SPAF----------PPYFSIYALLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIH 123
           +P F           PY  ++A  + S   + + + D  S +W  LPP PN       I 
Sbjct: 66  NPRFLFSKQSLSISSPYLFVFA-FNKSTARIQWQSLDLASGRWFVLPPMPNS---FTKIS 125

Query: 124 HPSFLSRHLPVQSLAVSGHLLLLAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWC 183
            P  LS      S+   G L +L     +        ++++ ++N W    P+ +PR + 
Sbjct: 126 SPHALS----CASMPRQGKLFVLGGGDVN-----RSAVVYTALTNRWSCISPMMSPRTYF 185

Query: 184 AAGALRGSVYVASG-IGSFFSTDVARSVERWDLKKPRGRGGDWEKVSGL-------KDRR 243
            +G + G +    G +G   + +    VE +D          W  V  L           
Sbjct: 186 VSGNVNGKIMAVGGSVGG--NGEATTEVESYD-----PDNDTWTVVKKLPMVLAKYDSAV 245

Query: 244 FSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEE 303
             ++     GW             P  G VYD +   W EM  GM  GW G V+ +  + 
Sbjct: 246 IGKEMCVTEGWAWPFMF-------PPMGQVYDSDEGTWREMSGGMKEGWTG-VSVVIRDR 305

Query: 304 MYVVDEVGGC-LRKYNPVGDVWEQV----IQSNRLKGAVQMAAGGGRVCVVCGG 332
           ++V+ E G   ++ Y    D W  V    +Q  +++    +     RV VV  G
Sbjct: 306 LFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASG 330

[Close]

BLAST of CmaCh06G005940 vs. TAIR 10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 6.4e-16
Identity = 78/297 (26.26%), Postives = 117/297 (39.39%), Query Frame = 0


Query: 25  PPLLPGLPDHVAQLCLSRLPPS---LLFSVSRSWRRLIYSPAFPPYFS--------IYAL 84
           PPLLPGLPD +A  CL R+P +    L  V + W RL     F             +Y  
Sbjct: 76  PPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVF 135

Query: 85  LSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLLL 144
                  + + TFDPIS  W  LPP P               S  +      +SG  L L
Sbjct: 136 KRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGCHLYL 195

Query: 145 AATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIGSFFSTDV 204
                 L  ++ R + ++  +N W   P +   R +     +   +YVA G        +
Sbjct: 196 FGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTL 255

Query: 205 ARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVY 264
            RS E +D  K R     W   S + D   +   +  V +  K  +  +          Y
Sbjct: 256 -RSAEVYDPNKNR-----W---SFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSEAY 315

Query: 265 DLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGC-LRKYNPVGDVWEQVIQS 310
           D E + W  + +GMV GWR P  +++   +Y +D   GC LR ++   D W + + S
Sbjct: 316 DPEVNSWSPVSDGMVAGWRNPCTSLN-GRLYGLDCRDGCKLRVFDESTDSWNKFMDS 350

[Close]

BLAST of CmaCh06G005940 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.3e-12
Identity = 87/369 (23.58%), Postives = 138/369 (37.40%), Query Frame = 0


Query: 2   VTTTSTSSKRNKLALHHHRHCPSPPLLPGLPDHVAQLCLSRLPP---SLLFSVSRSWRRL 61
           V  +S S KR K++  +        L+P LPD ++   L+RLP    S +  VSR WR  
Sbjct: 19  VECSSESRKRRKISSENDEE-ECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSA 78

Query: 62  IYSPAFPPYFS--------IYALLSSSPNSLDFFTFDPISSKWNRLPPPP---------- 121
           + +                +Y L     + L ++  DP+S+KW RLPP P          
Sbjct: 79  VSTSEVYSLRKELGRTEEWLYVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRK 138

Query: 122 --------NPPPLDLMIHHPSFLSRHLPVQSL--------AVSGHLLLLAATTQDLLPAL 181
                     P  ++     SFL R    + +        AV G L ++   ++     +
Sbjct: 139 SLSGLWNMITPSFNVGAIVRSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTV 198

Query: 182 PRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASGIG-SFFSTDVARSVERWDLK 241
                F P+ NSW     +   R +   G L   +YV  G+          +S E +D  
Sbjct: 199 SCVWRFDPILNSWSEVSSMLASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPS 258

Query: 242 KPRGRGGDWEKVSGLK-------DRRFSRDAIDAVG-----WRGKLCMVNVKGDAP---- 301
                   W +V  +           F  D +  +      + G+LC+       P    
Sbjct: 259 TDA-----WSEVPSMPFSKAQVLPNAFLADLLKPIATGMTCYNGRLCVPQSLYSWPFFVD 318

Query: 302 KEGLVYDLERDVWEEMPEGMVRGWRG-----PVAAMDEEEMYVVDE----VGGCLRKYNP 308
             G VYD E ++W EMP GM  GW        ++ + + E+Y  D       G ++ Y+ 
Sbjct: 319 VGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVDGELYAFDPSSSMENGKIKVYDQ 378

[Close]

BLAST of CmaCh06G005940 vs. TAIR 10
Match: AT1G30090.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 7.3e-12
Identity = 74/299 (24.75%), Postives = 112/299 (37.46%), Query Frame = 0


Query: 26  PLLPGLPDHVAQLCLSRLPPS-------------LLFSVSRSWRRLIYSPAFPPYFSIYA 85
           PL+PGLPD VA  CL R+P               LLF    ++        F   +    
Sbjct: 52  PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVV 111

Query: 86  LLSSSPNSLDFFTFDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLL 145
             S     + +   D  +  W+ +P     P  D +  H  F S  +P +     G + +
Sbjct: 112 GFSRCTGKIQWKVLDLRNLTWHEIPA---MPCRDKVCPH-GFRSVSMPRE-----GTMFV 171

Query: 146 LAATTQDLLPALPRPLIFSPVSNSWQFGPPLTTPRRWCAAGALRGSVYVASG-IGSFFST 205
                 D    L   L +  V N W     + T R + A+G + G +Y A G     +  
Sbjct: 172 CGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYEL 231

Query: 206 DVARSVERWDLKKPRGRGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVN---VKGDAPK 265
           D A  +   D        G+W  VS +     S    D     GKL +            
Sbjct: 232 DCAEVLNPLD--------GNWRPVSNMVAHMAS---YDTAVLNGKLLVTEGWLWPFFVSP 291

Query: 266 EGLVYDLERDVWEEMPEGMVRGWRGPVAAMDEEEMYVVDEVGGC-LRKYNPVGDVWEQV 307
            G VYD   D WE M  G+  GW G  + +  + +++V E+    ++ Y+PV D WE +
Sbjct: 292 RGQVYDPRTDQWETMSMGLREGWTG-TSVVIYDRLFIVSELERMKMKVYDPVTDSWETI 329

The following BLAST results are available for this feature:

BLAST of CmaCh06G005940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX29	4.0e-95	51.39	F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1...	[more]
Q8LAW2	3.7e-16	25.99	F-box protein AFR OS=Arabidopsis thaliana OX=3702 GN=AFR PE=1 SV=2	[more]
Q93W93	9.0e-15	26.26	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]
Q9LM55	6.0e-11	23.58	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q9C6Z0	1.0e-10	24.75	F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g3009...	[more]

BLAST of CmaCh06G005940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KU65	5.9e-219	100.00	F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC1114987...	[more]
A0A6J1FAD8	1.3e-210	96.26	F-box/kelch-repeat protein SKIP25-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1FF93	8.0e-208	93.02	F-box/kelch-repeat protein SKIP25-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1E5V4	3.4e-174	82.40	F-box/kelch-repeat protein SKIP25-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HK01	1.3e-173	82.04	F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC1114652...	[more]

BLAST of CmaCh06G005940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005807.1	1.2e-218	100.00	F-box/kelch-repeat protein SKIP25-like [Cucurbita maxima]	[more]
XP_022937172.1	2.7e-210	96.26	F-box/kelch-repeat protein SKIP25-like isoform X2 [Cucurbita moschata]	[more]
KAG6596685.1	1.1e-208	95.24	F-box/kelch-repeat protein SKIP25, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937163.1	1.7e-207	93.02	F-box/kelch-repeat protein SKIP25-like isoform X1 [Cucurbita moschata]	[more]
KAG7028220.1	3.7e-207	94.96	F-box/kelch-repeat protein SKIP25, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh06G005940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31350.1	2.8e-96	51.39	KAR-UP F-box 1	[more]
AT2G24540.1	2.6e-17	25.99	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G55270.1	6.4e-16	26.26	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	4.3e-12	23.58	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G30090.1	7.3e-12	24.75	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13964	Kelch_6	coord: 118..167 e-value: 2.2E-6 score: 27.7
None	No IPR available	PANTHER	PTHR47590	F-BOX/KELCH-REPEAT PROTEIN SKIP25	coord: 1..372
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 70..365 e-value: 2.6E-22 score: 81.0
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 76..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G005940.1	CmaCh06G005940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding