CmaCh05G013690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	mitochondrial import inner membrane translocase subunit TIM17-2-like
Location	Cma_Chr05: 10299850 .. 10301857 (+)
RNA-Seq Expression	CmaCh05G013690
Synteny	CmaCh05G013690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACGCCAGAAACCTCAAGGGAACCTTGCCCCGATCGCATCCTTGACGATATTGGCGGCGCTTTTGGCATGGGAGCTGTAGGTGGCTCAGCCTTTCACTTCATCAGAGGTCTCTACAATTCTCCCAAAGGATCCAGGATTATCGGCGGCTCTCAGGCCGTCAGGATGAATGCGCCGCGTGTCGGCGGGAGCTTCGCTGTTTGGGGTGGCTTATTCTCTGCTTTCGATTGCACCATGGTCTATGTCCGCCAGAAGGAGGATCCATGGAACTCGATCATCGCCGGTGCCGCTACCGGCGGTTTTCTTCAGATGCGACAGGGACCTGCATCTGCAGCTCGTTCGGCAGTGTTCGGCGGCGTTTTGTTGGCTTTGATTGAAGGAGCTGGGATTATGCTAAACAAAGTCCTCAGCCAGCAACAGAATATGCCTGTTGTGATTGAAGAGCCTGCTGGTATGGGTGGTGTACCTGGGTATCCTACAGGCCAATTACCTGGCCATGCTCCTTCCATGTCTCTACCACAAGCGGAATTGGTAGGTATTTATTCTTCTCCGTCGTCGTCTTCTTCAGATTCTGGTAGTGGCTCGTGGTTCGGAGGTTGGTTTGGTGGAGGCAAGAAGAAGGAATCTGAAGTGTCGGGTGGAGGAAGCGAAACAACAATTTTGGAGAGCTTTGATGCACCGCCTGTGCCAAATTTTGAGTACAAGTAAAATTTGTTATTTGGGTTTCAAGGTTTGAGATAAGTAGACCATGAATTCTATCGTAGAACGTATGGCGTGTGTTATAGGTTTGCTTCTAATTAATGAAAAATCGTGCAGTCGGCTGACGTTCCAAAGTTATCAAATTATCATTCAGGTTACGCTGAATTGTACAATAAGTTTAGGCTTTATTATTTACATTATTTTCTGTTGTAAATAAATTACCTTTTTATGGATTTGATCCATCTTTTCTAGTCATGATTATAAATAGGTTTTGGTTGTTAGGATCTTGTAGTTCTAGTTCAAGTCCAATTCCTCTTTGTTGTTCTTTAGCTGGAGGTGGTGCCTGGCTTTGAAGTTTGAGGTGACAATCGGTTGGAAAAGTTGCATAGTTGAATTTTTCGGTTCTCTGAGATCTTTTTAGCTCAACGAACATCTAGACATCTTAGTCAATAGTACATGCCCAAATCAGTTTGAGTTATACTCGAGTTTGGTTTTCTTACATTTCTTCACTCATCGGTTTCGTTCTGTGGAGTCTTTCATCGGGATCTTTTTTGGCTTGCTTAGATTGACTTTGTTCTGCGGAGTCTTTCATCATATGATCTTTTCTGGCTTGGTTGGATTTACTTTGTTCTGTGGAGTCTTTCATCATATGATCTATTCTGGCTTGGTTGGATTGACTAACCAGGTGAACATATATATATATATATATATATATGCACTTAAAAAGTCATTCTAAGCATACCATCTCTGTTTCATTTGGTAAAGTGCTTCCCTTGAACAACACAAGTTGTGTTGGATTTTGATAATTATGGACCTATTCAATGTACATGAATGAGCAATACTCAAGTGCCAGATACTTAGAATTCCCTGCTCCATGTTCTGGCATCATAGATGGCTTCAATGTGTTGGTGTTGGGTCTCTGGTTTTACAGTTTTCATGTTCATATTCTGCTCTGTTATTTCTGAAGATATCTGCATGGAAGATACCATGGGCTGGTTCATCGTTGAAGATACCTCCATTCAGCTTAACTTCTCCATTGATTAATTTTTCAAGTGCTTAGATTTTGTTCAAATTTCATTCTTGTTCTAACAGCTCAATTTTGGTAATGTAAATGTTCTGCTGTTTCATATATATTCAGGTGGTAGATTTTTCTCTCTTAAACTAACACGAACATAATGGCACTGATTTTTCTCTGTTAGGAGGAGGCATTTGGTTCAAGTTTTTGAGGAAAAGAATAGGGAAATTGGTAAGAGAGATCCTTCTTTTCCTCTTTTCATGTATATTAAGGACTTCAATAACAACTTAG

mRNA sequence

ATGGGAACGCCAGAAACCTCAAGGGAACCTTGCCCCGATCGCATCCTTGACGATATTGGCGGCGCTTTTGGCATGGGAGCTGTAGGTGGCTCAGCCTTTCACTTCATCAGAGGTCTCTACAATTCTCCCAAAGGATCCAGGATTATCGGCGGCTCTCAGGCCGTCAGGATGAATGCGCCGCGTGTCGGCGGGAGCTTCGCTGTTTGGGGTGGCTTATTCTCTGCTTTCGATTGCACCATGGTCTATGTCCGCCAGAAGGAGGATCCATGGAACTCGATCATCGCCGGTGCCGCTACCGGCGGTTTTCTTCAGATGCGACAGGGACCTGCATCTGCAGCTCGTTCGGCAGTGTTCGGCGGCGTTTTGTTGGCTTTGATTGAAGGAGCTGGGATTATGCTAAACAAAGTCCTCAGCCAGCAACAGAATATGCCTGTTGTGATTGAAGAGCCTGCTGGTATGGGTGGTGTACCTGGGTATCCTACAGGCCAATTACCTGGCCATGCTCCTTCCATGTCTCTACCACAAGCGGAATTGGTAGGTATTTATTCTTCTCCGTCGTCGTCTTCTTCAGATTCTGGTAGTGGCTCGTGGTTCGGAGGTTGGTTTGGTGGAGGCAAGAAGAAGGAATCTGAAGTGTCGGGTGGAGGAAGCGAAACAACAATTTTGGAGAGCTTTGATGCACCGCCTGTGCCAAATTTTGAGTACAAGACTTCAATAACAACTTAG

Coding sequence (CDS)

ATGGGAACGCCAGAAACCTCAAGGGAACCTTGCCCCGATCGCATCCTTGACGATATTGGCGGCGCTTTTGGCATGGGAGCTGTAGGTGGCTCAGCCTTTCACTTCATCAGAGGTCTCTACAATTCTCCCAAAGGATCCAGGATTATCGGCGGCTCTCAGGCCGTCAGGATGAATGCGCCGCGTGTCGGCGGGAGCTTCGCTGTTTGGGGTGGCTTATTCTCTGCTTTCGATTGCACCATGGTCTATGTCCGCCAGAAGGAGGATCCATGGAACTCGATCATCGCCGGTGCCGCTACCGGCGGTTTTCTTCAGATGCGACAGGGACCTGCATCTGCAGCTCGTTCGGCAGTGTTCGGCGGCGTTTTGTTGGCTTTGATTGAAGGAGCTGGGATTATGCTAAACAAAGTCCTCAGCCAGCAACAGAATATGCCTGTTGTGATTGAAGAGCCTGCTGGTATGGGTGGTGTACCTGGGTATCCTACAGGCCAATTACCTGGCCATGCTCCTTCCATGTCTCTACCACAAGCGGAATTGGTAGGTATTTATTCTTCTCCGTCGTCGTCTTCTTCAGATTCTGGTAGTGGCTCGTGGTTCGGAGGTTGGTTTGGTGGAGGCAAGAAGAAGGAATCTGAAGTGTCGGGTGGAGGAAGCGAAACAACAATTTTGGAGAGCTTTGATGCACCGCCTGTGCCAAATTTTGAGTACAAGACTTCAATAACAACTTAG

Protein sequence

MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGGVLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGHAPSMSLPQAELVGIYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPPVPNFEYKTSITT

Homology

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BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 312.4 bits (799), Expect = 4.5e-84
Identity = 168/247 (68.02%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFI+G YNSPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R GGSFAVWGGLFS FDCTMVY+RQKEDPWNSIIAGAATGGFL MRQG  +A+RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPA--------GMGGVPGYPTGQ-LPG-HAPS 180
           VLLALIEGAGIMLNKVL+Q QNM  ++E+P         GM G+PG P  Q +PG     
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNM--MMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 MSLPQAEL-VGIYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPP 237
           M   Q++  +   S   +++S S S SWFGG F   KKKE    G  S+T +LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

[Close]

BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 145/236 (61.44%), Postives = 172/236 (72.88%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H IRG+YNSP G+R+ GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R GGSF+VWGGL+S FDC +VY RQKEDPWNSI++GAATGGFL +RQG  ++ARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGHAPSMSLPQAELVG 180
           VLLA+IEG GIMLNKV S   N   + +  A    +P Y  GQ+ G     S+P      
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAA--TSLP-YGMGQISG----QSVP------ 180

Query: 181 IYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPPVPNFEYK 237
               P +SSS SGS SWFG  F   KKKE+E     S T ILESFDAPPVP +E+K
Sbjct: 181 ---VPETSSSSSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

[Close]

BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.5e-42
Identity = 88/167 (52.69%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKG--SRIIGGSQAVRMNAPRV 64
           E +REPCP RI+DD GGAF MG +GG  F  I+G  N+P G   R+ G + AVR+ AP++
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGGVL 124
           GGSFAVWGGLFS  DC +V +R KEDPWNSI +GA TG  L  R GP +   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQQ-QNMPVVIEEPAGM-----GGVPGYPTGQ 164
           LALIEG GI+L +  +QQ +N P  +E+P+ +        PGYP+ Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169

[Close]

BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-41
Identity = 88/167 (52.69%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKG--SRIIGGSQAVRMNAPRV 64
           E +REPCP RI+DD GGAF MG +GG  F  I+G  N+P G   R  G   AVR+ AP++
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGGVL 124
           GGSFAVWGGLFS  DC +V +R KEDPWNSI +GA TG  L  R GP +   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQQ-QNMPVVIEEPAGM-----GGVPGYPTGQ 164
           LALIEG GI+L +  +QQ +N P  +E+P+ +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYPNYQ 169

[Close]

BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot
Match: Q99595 (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens OX=9606 GN=TIMM17A PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKG--SRIIGGSQAVRMNAPRV 64
           E +REPCP RI+DD GGAF MG +GG  F  I+G  NSP G   R+ G   A++  AP++
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62

Query: 65  GGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGGVL 124
           GGSFAVWGGLFS  DC+MV VR KEDPWNSI +GA TG  L  R GP +   SA  GG+L
Sbjct: 63  GGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQQ-QNMPVVIEEPAGMGGVPGYPTGQLP 166
           LALIEGAGI+L +  S Q  N P   E+P+ +      P+ QLP
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQFAEDPSQL------PSTQLP 160

[Close]

BLAST of CmaCh05G013690 vs. TAIR 10
Match: AT2G37410.1 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-85
Identity = 168/247 (68.02%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFI+G YNSPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R GGSFAVWGGLFS FDCTMVY+RQKEDPWNSIIAGAATGGFL MRQG  +A+RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPA--------GMGGVPGYPTGQ-LPG-HAPS 180
           VLLALIEGAGIMLNKVL+Q QNM  ++E+P         GM G+PG P  Q +PG     
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNM--MMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 MSLPQAEL-VGIYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPP 237
           M   Q++  +   S   +++S S S SWFGG F   KKKE    G  S+T +LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

[Close]

BLAST of CmaCh05G013690 vs. TAIR 10
Match: AT2G37410.2 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-85
Identity = 168/247 (68.02%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFI+G YNSPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R GGSFAVWGGLFS FDCTMVY+RQKEDPWNSIIAGAATGGFL MRQG  +A+RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPA--------GMGGVPGYPTGQ-LPG-HAPS 180
           VLLALIEGAGIMLNKVL+Q QNM  ++E+P         GM G+PG P  Q +PG     
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNM--MMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 MSLPQAEL-VGIYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPP 237
           M   Q++  +   S   +++S S S SWFGG F   KKKE    G  S+T +LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

[Close]

BLAST of CmaCh05G013690 vs. TAIR 10
Match: AT1G20350.1 (translocase inner membrane subunit 17-1 )

HSP 1 Score: 267.7 bits (683), Expect = 9.1e-72
Identity = 145/236 (61.44%), Postives = 172/236 (72.88%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H IRG+YNSP G+R+ GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R GGSF+VWGGL+S FDC +VY RQKEDPWNSI++GAATGGFL +RQG  ++ARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGHAPSMSLPQAELVG 180
           VLLA+IEG GIMLNKV S   N   + +  A    +P Y  GQ+ G     S+P      
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAA--TSLP-YGMGQISG----QSVP------ 180

Query: 181 IYSSPSSSSSDSGSGSWFGGWFGGGKKKESEVSGGGSETTILESFDAPPVPNFEYK 237
               P +SSS SGS SWFG  F   KKKE+E     S T ILESFDAPPVP +E+K
Sbjct: 181 ---VPETSSSSSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

[Close]

BLAST of CmaCh05G013690 vs. TAIR 10
Match: AT5G11690.1 (translocase inner membrane subunit 17-3 )

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-37
Identity = 74/126 (58.73%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIRGLYNSPKGSRIIGGSQAVRMNAP 60
           M T + S+E    RI++ IG AFG GAVGGS +HF+RG YNSP G+R +GG+QA  MNAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGG 120
           R+GG+FAV+GGL S FD  +V +R+KEDPWNSI+AGAATGG L +R+G  +A+ SAV  G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALI 127
             LA++
Sbjct: 121 FFLAVL 126

[Close]

BLAST of CmaCh05G013690 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 33/110 (30.00%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 20  GGAFGMGAVGGSAFHFIRGLYNSPKG-------SRIIGGS-QAVRMNAPRVGGSFAVWGG 79
           G  +  G+V G++     G+ +   G       +RI+  S QA R    RVG    + G 
Sbjct: 64  GTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVG----IVGL 123

Query: 80  LFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSAVFGGV 122
           +++  +  +V V  K+D W S++AG  TG   +  +G  SAA +  FGG+
Sbjct: 124 IYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGI 169

The following BLAST results are available for this feature:

BLAST of CmaCh05G013690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SP35	4.5e-84	68.02	Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis t...	[more]
Q9LN27	1.3e-70	61.44	Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis t...	[more]
O60830	9.5e-42	52.69	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ...	[more]
Q9Z0V7	3.6e-41	52.69	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus ...	[more]
Q99595	1.4e-40	54.27	Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens ...	[more]

BLAST of CmaCh05G013690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37410.1	3.2e-85	68.02	translocase inner membrane subunit 17-2	[more]
AT2G37410.2	3.2e-85	68.02	translocase inner membrane subunit 17-2	[more]
AT1G20350.1	9.1e-72	61.44	translocase inner membrane subunit 17-1	[more]
AT5G11690.1	4.2e-37	58.73	translocase inner membrane subunit 17-3	[more]
AT1G17530.1	1.5e-05	30.00	translocase of inner mitochondrial membrane 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 16..122 e-value: 7.2E-28 score: 97.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..227
None	No IPR available	PANTHER	PTHR10485:SF23	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17-2-LIKE	coord: 1..236
None	No IPR available	PANTHER	PTHR10485	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17	coord: 1..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013690.1	CmaCh05G013690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex
molecular_function	GO:0008320	protein transmembrane transporter activity