CmaCh04G014830 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGACGAATATTGATCGGGGAAGAAGCGGAAGAGTTTAGATTTCGAGGCCTTTGACAATGGCAAGTCTCTTTCACTCTTTAATTTCATGGGCTCGGACGCTTTTCTGTATCATCTTTATTTGTGGTTTCCCCTCCTCTCTCACTTGTCATTTCTTACCTTGAGTTCTTGATTTCAGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCAATTACAGCCGCGTTCATCCTCGCTCCGTTGATTGTCTCGATGGTAATAGTTCTCAAGCATGGATGATGTTGGAATTTAACGAAAGTCGGAAATTTTCTATAATTTATAATTCTCGCTTGAGCAAGAATTGTCGAAATTGAGTTTCCTTGTCCTTGCAATTTTGGAAACCGATGGTGATTTTGTGCTTTACTTTCTCCTGTTTGGACTAAAAACATCAGAGGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTATATTATTCCGTTCGTGTAGTGAAATAGTAGATTTTCTGTCTGCACAATGCTTAAAATTAATGTTCGTTGAAACTGTCAGTGAAAGTAGCCTAAAATGATCGTTCCCTTTCAATCAATATTTAGGTTACGAGTTTGGTGGATGGTAACCCAAAAGAGAAACAAGTGGAAATTGAAGACGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTATTCACACTTAGTGGTATGCATCTATTGCTTGGTTGATCCATTGATATAATAAAACGGAACTCTTATTCTTTATGTGCGTAAGCTGCTATGGCATGTGTCTCTTCCTGTCCTGATAGGTTAATGAAGCTAGAGTTGGCCTCAGTTACACTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCGAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCATTTTCATGGTATGTTCTTATAGTGCAACCATCCTTTTTTGTCAACATATCTCATTGTTTACGATCACTGTTTTTGTTATACGTGCTAGATGCCATTTATTTGCCCTATAATCTTTCATTAGTAAGCATGTTTAGAATAGTATGTAGGGAAATGAATAAATTTTGTGAGTTTGAGTTGAAAAATAAGAGAGAGAACAAATTAGGTATAGACTATCATAGCAAATCTTGAAACATTGATTAATGAAAAAGGGTGTTTTGTGAATAATTGTAATTCTTCCAATTGATCGTTAAAAGGCAGAACAAAACAAACTTAAACTTTCTCCTTTAAATTCCTAACTTCGCAGAGGTTGTCTCTTTAGTATCTTAGACAAAAAAGTTTGGTTAAGGTCTTTTGTTACTTTCTGTTTTAGCCTAAGCCCATCGTGAGTAGGTAATGTCCGCTTCAGCCCGTTACGTATCATGTCAGTCTCACAGTTTTAAAATGTGTCTACTAGGAAGAGGTTTCCACACTTTTATAAGGAATGATTCGTTCTCCTCTCCAACTGATGTGGAATCTCACAATCCACCCTCTTGAGGGTTTTAAAACGTGTCTGCTAGGTTGAGGTTTCCACACTCTTATAAGAAATGGTTCGTTTCCCTTTTCAACCCATATGATATCTTACACTTTCTTTTAGCAAACGTGATTAGCCACATTTACCCTTCAATTTGATTTTCTTGTACTTCCCTTCCACATTATGATGGCCCTAACTTCTCTATTGTTATATGGTGATCATTAGATTTGAACATAGATGCTGAATGTTACTTTTGTTACATTAGTTTCTGTGTACAGTTTCTGCGATTTTGAATGTGCTTGTTTTAGAACAATGATGGGTCTTTCTATGATTCATCCACACTTAGATTATGCTGAAAGTACTATAGATCTCCAATGGTGATGATACTTCTGATGTTATTTGATTGAATTACTTCCTGATCATAGTACAAAATATAATGCACCATGCCCTGTTGGGTTTTTCTTGCCCCTTTCTTATCTTCTTATTTTCTGTCTTCATGTATTGCATACATTACCACGTATGATTATGACACTTCTGGAAGTGTTCCCAAACATACTCTAATGTGGTTTCCAATTTGAATGTTTTTACAGGATGACAAGTTTGAGCGTCTTTTTAAAATGTACGCAGAGAAGCGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATACCCCAGTTGGCCTTGGCATGGAAGACGATGACATGATAGATGTGAACATTAGGCCGAGTTGAGTAACGTGTCTTTTGAGTTTATATTTGGTGAATTAAAATCACCAGTTTTGGGGATGGGGGA CCGACGAATATTGATCGGGGAAGAAGCGGAAGAGTTTAGATTTCGAGGCCTTTGACAATGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCAATTACAGCCGCGTTCATCCTCGCTCCGTTGATTGTCTCGATGAGGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTTACGAGTTTGGTGGATGGTAACCCAAAAGAGAAACAAGTGGAAATTGAAGACGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAATGAAGCTAGAGTTGGCCTCAGTTACACTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCGAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCATTTTCATGGATGACAAGTTTGAGCGTCTTTTTAAAATGTACGCAGAGAAGCGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATACCCCAGTTGGCCTTGGCATGGAAGACGATGACATGATAGATGTGAACATTAGGCCGAGTTGAGTAACGTGTCTTTTGAGTTTATATTTGGTGAATTAAAATCACCAGTTTTGGGGATGGGGGA ATGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCAATTACAGCCGCGTTCATCCTCGCTCCGTTGATTGTCTCGATGAGGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTTACGAGTTTGGTGGATGGTAACCCAAAAGAGAAACAAGTGGAAATTGAAGACGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAATGAAGCTAGAGTTGGCCTCAGTTACACTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCGAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCATTTTCATGGATGACAAGTTTGAGCGTCTTTTTAAAATGTACGCAGAGAAGCGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATACCCCAGTTGGCCTTGGCATGGAAGACGATGACATGATAGATGTGAACATTAGGCCGAGTTGA MADYAEEFEPLFNYSRVHPRSVDCLDEEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKEKQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVTLSAKNLLREVEESAKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRIFMDDKFERLFKMYAEKRKIDPKSLVFIFDGDKVGPDDTPVGLGMEDDDMIDVNIRPS Homology
BLAST of CmaCh04G014830 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 6.7e-05 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of CmaCh04G014830 vs. ExPASy TrEMBL
Match: A0A6J1JEF8 (uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 7.6e-121 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of CmaCh04G014830 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113 Identity = 214/225 (95.11%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of CmaCh04G014830 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 8.0e-94 Identity = 182/225 (80.89%), Postives = 201/225 (89.33%), Query Frame = 0
BLAST of CmaCh04G014830 vs. ExPASy TrEMBL
Match: A0A5A7SVU4 (Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001350 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89 Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = 0
BLAST of CmaCh04G014830 vs. ExPASy TrEMBL
Match: A0A1S3BF31 (uncharacterized protein LOC103489317 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489317 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89 Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = 0
BLAST of CmaCh04G014830 vs. NCBI nr
Match: XP_022985708.1 (uncharacterized protein LOC111483658 [Cucurbita maxima]) HSP 1 Score: 443.0 bits (1138), Expect = 1.6e-120 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of CmaCh04G014830 vs. NCBI nr
Match: XP_023553495.1 (uncharacterized protein LOC111810893 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114 Identity = 214/225 (95.11%), Postives = 219/225 (97.33%), Query Frame = 0
BLAST of CmaCh04G014830 vs. NCBI nr
Match: KAG6601268.1 (hypothetical protein SDJN03_06501, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 421.0 bits (1081), Expect = 6.4e-114 Identity = 213/225 (94.67%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmaCh04G014830 vs. NCBI nr
Match: KAG7032057.1 (hypothetical protein SDJN02_06100 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113 Identity = 212/225 (94.22%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmaCh04G014830 vs. NCBI nr
Match: XP_022957159.1 (uncharacterized protein LOC111458628 [Cucurbita moschata]) HSP 1 Score: 419.1 bits (1076), Expect = 2.4e-113 Identity = 214/225 (95.11%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of CmaCh04G014830 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40 Identity = 98/224 (43.75%), Postives = 141/224 (62.95%), Query Frame = 0
BLAST of CmaCh04G014830 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 ) HSP 1 Score: 45.4 bits (106), Expect = 6.8e-05 Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 0
BLAST of CmaCh04G014830 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 ) HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04 Identity = 25/81 (30.86%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CmaCh04G014830 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 ) HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04 Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0
BLAST of CmaCh04G014830 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 ) HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04 Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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