Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACTCAGCCATCTCCAAAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGCTGGACTTCCTCCATGGACGACCTTCTCTTATTCGACTACTCTAAAACAACTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGATGACGATGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACGTACATTACATTCTCAGCTATATAAATCATCATCCAAAACTTCTGTTTACATCTTTTAAAAACTGGGTTTTTTTGTTTTGAATCAGATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCAGCAGCACACTGCCATGATCAATCAAACAAAACACAGGGTTTGTAATTTTTGAGTGTTTTTATATTAAAAATCCATTCTTTGATGCAATTTTAACTGTGATTTGGGGTTCTGGTTTTGTAGGGAAAAGAAATTGAGGAATTTGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG
mRNA sequence
ATGGAAAACTCAGCCATCTCCAAAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGCTGGACTTCCTCCATGGACGACCTTCTCTTATTCGACTACTCTAAAACAACTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGATGACGATGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCAGCAGCACACTGCCATGATCAATCAAACAAAACACAGGGGAAAAGAAATTGAGGAATTTGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG
Coding sequence (CDS)
ATGGAAAACTCAGCCATCTCCAAAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGCTGGACTTCCTCCATGGACGACCTTCTCTTATTCGACTACTCTAAAACAACTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGATGACGATGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCAGCAGCACACTGCCATGATCAATCAAACAAAACACAGGGGAAAAGAAATTGAGGAATTTGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG
Protein sequence
MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Homology
BLAST of CmaCh04G009430 vs. ExPASy TrEMBL
Match:
A0A6J1JN91 (uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825 PE=4 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT
Sbjct: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD 120
ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD 120
Query: 121 NNCSTGLKNIGLCLVPVSMAINYFG 146
NNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 NNCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of CmaCh04G009430 vs. ExPASy TrEMBL
Match:
A0A6J1FU25 (uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC111446888 PE=4 SV=1)
HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAIS+ICTQKQVDQDHSSWTSSMDDLLLFD+SKT SYHFQNAAVFSSS DDDDLQDT
Sbjct: 1 MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQ-QQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGR 120
ATSPPHPSIISDMDGLSSKQKKQ QQQQ +AMINQTKH+GKEIEEFGEVEDRIEVGFVGR
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGR 120
Query: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 146
DNNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of CmaCh04G009430 vs. ExPASy TrEMBL
Match:
A0A0A0L2F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 3.5e-34
Identity = 100/179 (55.87%), Postives = 119/179 (66.48%), Query Frame = 0
Query: 1 MENSAISKICTQKQVD------QDHSSW--TSSMDDLLLFDYSKTT---SYH-FQNAAVF 60
MENSA S+IC+ ++ D + SW +SSMDDLL+FD TT SY FQ +
Sbjct: 1 MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60
Query: 61 SSSDD-------------------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHT 120
SS+ D DDDL+DTATSPPHPSI+S MD SSKQ+K+Q+
Sbjct: 61 SSAVDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQR---- 120
Query: 121 AMINQTKHRGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 145
AM+NQTKH+G E++GEVEDRI EVGFVGRDNN CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 AMMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYF 175
BLAST of CmaCh04G009430 vs. ExPASy TrEMBL
Match:
A0A5D3BKS2 (Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00160 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 5.6e-32
Identity = 98/179 (54.75%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQ------DHSSW--TSSMDDLLLFDYSKT---TSYH-FQNAAVF 60
MENSA S+IC+ + D+ + SW +SSMDDLL+FD T +SY FQ
Sbjct: 1 MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60
Query: 61 SSSDD-------------------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHT 120
SS+ D DDDL+DTATSPPHPSI+S MD SSKQ+K+Q+
Sbjct: 61 SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQR---- 120
Query: 121 AMINQTKHRGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 145
A INQTKH+GK E++GEVEDR I+VG VGRDNN CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 ATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 175
BLAST of CmaCh04G009430 vs. ExPASy TrEMBL
Match:
A0A1S3CKU1 (uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 5.6e-32
Identity = 98/179 (54.75%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQ------DHSSW--TSSMDDLLLFDYSKT---TSYH-FQNAAVF 60
MENSA S+IC+ + D+ + SW +SSMDDLL+FD T +SY FQ
Sbjct: 1 MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60
Query: 61 SSSDD-------------------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHT 120
SS+ D DDDL+DTATSPPHPSI+S MD SSKQ+K+Q+
Sbjct: 61 SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQR---- 120
Query: 121 AMINQTKHRGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 145
A INQTKH+GK E++GEVEDR I+VG VGRDNN CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 ATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 175
BLAST of CmaCh04G009430 vs. NCBI nr
Match:
XP_022989755.1 (uncharacterized protein LOC111486825 [Cucurbita maxima])
HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT
Sbjct: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD 120
ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRD 120
Query: 121 NNCSTGLKNIGLCLVPVSMAINYFG 146
NNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 NNCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of CmaCh04G009430 vs. NCBI nr
Match:
XP_022941575.1 (uncharacterized protein LOC111446888 [Cucurbita moschata])
HSP 1 Score: 264.6 bits (675), Expect = 5.0e-67
Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAIS+ICTQKQVDQDHSSWTSSMDDLLLFD+SKT SYHFQNAAVFSSS DDDDLQDT
Sbjct: 1 MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQ-QQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGR 120
ATSPPHPSIISDMDGLSSKQKKQ QQQQ +AMINQTKH+GKEIEEFGEVEDRIEVGFVGR
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGR 120
Query: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 146
DNNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of CmaCh04G009430 vs. NCBI nr
Match:
KAG7031402.1 (hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 136/146 (93.15%), Postives = 141/146 (96.58%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAIS+ICTQKQVD+DHSSWTSSMDDLLLFD+SKT SYH QNAAVFSSS DDDDLQDT
Sbjct: 1 MENSAISRICTQKQVDEDHSSWTSSMDDLLLFDHSKTISYHIQNAAVFSSS-DDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQH-TAMINQTKHRGKEIEEFGEVEDRIEVGFVGR 120
ATSPPHPSIISDMDGLSSKQKKQQQQQ +AMINQTKH+GKEIEEFGEVEDRIEVGFVGR
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGR 120
Query: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 146
DNNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 DNNCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of CmaCh04G009430 vs. NCBI nr
Match:
KAG6600765.1 (hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 261.5 bits (667), Expect = 4.2e-66
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0
Query: 1 MENSAISKICTQKQVDQDHSSWTSSMDDLLLFDYSKTTSYHFQNAAVFSSSDDDDDLQDT 60
MENSAIS+ICTQKQVD+DHSSWTSSMDDLLLFD+SKT SYH QNAAVFSSS DDDDLQDT
Sbjct: 1 MENSAISRICTQKQVDEDHSSWTSSMDDLLLFDHSKTISYHIQNAAVFSSS-DDDDLQDT 60
Query: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQH---TAMINQTKHRGKEIEEFGEVEDRIEVGFV 120
ATSPPHPSIISDMDGLSSKQKKQQQQQ +AMINQTKH+GKEIEEFGEVEDRIEVGFV
Sbjct: 61 ATSPPHPSIISDMDGLSSKQKKQQQQQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFV 120
Query: 121 GRDNNCSTGLKNIGLCLVPVSMAINYFG 146
GRDNNCSTGLKNIGLCLVPVSMAINYFG
Sbjct: 121 GRDNNCSTGLKNIGLCLVPVSMAINYFG 147
BLAST of CmaCh04G009430 vs. NCBI nr
Match:
XP_011652737.2 (uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical protein Csa_009500 [Cucumis sativus])
HSP 1 Score: 154.5 bits (389), Expect = 7.2e-34
Identity = 100/179 (55.87%), Postives = 119/179 (66.48%), Query Frame = 0
Query: 1 MENSAISKICTQKQVD------QDHSSW--TSSMDDLLLFDYSKTT---SYH-FQNAAVF 60
MENSA S+IC+ ++ D + SW +SSMDDLL+FD TT SY FQ +
Sbjct: 1 MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60
Query: 61 SSSDD-------------------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHT 120
SS+ D DDDL+DTATSPPHPSI+S MD SSKQ+K+Q+
Sbjct: 61 SSAVDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQR---- 120
Query: 121 AMINQTKHRGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 145
AM+NQTKH+G E++GEVEDRI EVGFVGRDNN CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 AMMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYF 175
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1JN91 | 2.0e-74 | 100.00 | uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825... | [more] |
| A0A6J1FU25 | 2.4e-67 | 94.52 | uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC1114468... | [more] |
| A0A0A0L2F7 | 3.5e-34 | 55.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1 | [more] |
| A0A5D3BKS2 | 5.6e-32 | 54.75 | Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A1S3CKU1 | 5.6e-32 | 54.75 | uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022989755.1 | 4.2e-74 | 100.00 | uncharacterized protein LOC111486825 [Cucurbita maxima] | [more] |
| XP_022941575.1 | 5.0e-67 | 94.52 | uncharacterized protein LOC111446888 [Cucurbita moschata] | [more] |
| KAG7031402.1 | 2.5e-66 | 93.15 | hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6600765.1 | 4.2e-66 | 91.89 | hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_011652737.2 | 7.2e-34 | 55.87 | uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
