CmaCh03G015100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G015100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ycf3-interacting protein 1, chloroplastic
Location	Cma_Chr03: 9409277 .. 9420950 (-)
RNA-Seq Expression	CmaCh03G015100
Synteny	CmaCh03G015100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTGCAAAGTTGTTAGACCATTTATGTGTGTTGATGTCTTCCCAATTTCGAAAGGTTAAGGAAGTTGGTGACCTGAATACAGGGGAGTCGGCGGTTGAAGCCCCGGTGAATGGTGGGTATTACTATAATGGTCCTAAGGTAGAAAAATTCCTTGTTAGATAAGTTTCGACCCGCACGAAAGGCATAACTATCTGGGCACTGTCTTAGAGAGAGACTCGGTAAAATAGGCATGTCTGTGAAGATGCGAAGTACCTGCACCTTGTCAGAATGACCCTATGAAGCTTCACTTTTCCTTGGGATAGGCTTTGGGCCTTTCATACACAACTTAGGTGGAGGGCGAAGAAGTTGGTCTAAAAGTATCCCATCTATGTTTTATGTAGAAATTTATCGACAATTATTCAAGGAGGTGATAACAACCAAAAAATGTTTCTTTGTCCATAATGTACTAGAAGGTGGAAATTTTAAGCTAAGATTTTTTTTTTTAATTTTATTTTATTTTTGGGTAACTTTTTTTAGAACCACATGCTAAAAGGCATCTATTCCACTTTTCAATCCGATTGTTTTGGGTGCTCAATAGGAGAAGATAGAGAAGGAAAGGACGGAATAGTAATCCAAGAAAAAGTAATTTCACCCCTTCAACGTTGAAAAAACCACGGTTTAACAAACATGTTATTTTATTATTGTTTTTTTTTTCTTTTCCTTTTTCTGCACAATTTCCCCTAAAATGCTAAGTGAACGCAAAGACCCGTTACCAGATATTACTACAGTCTGTTGTTCAATCTCTATAATCTGTAGATAATAATGGAAGTCATGGCTCTTCAACTCCGTCACTTCCCCCTGTCCCCTTCTCCTTCGTCTATCAAGCACAATTACAAAGCTTCTCGTTGTTTCCGCCATCTTCCCCTTCCCAATTATGCCTCTCGCCACCATCTTCCTGTTTCAAGTAGCCGCAATCGATGGGTTGTGGGCTGCGTTGGCAAGGAAGATACCCAATTGAGTCAATCATCGTCTACCGAAGCTGAACAGCCAGACGCCCAAGACCTAGAATACATTCGTCAGATTCAAAGGGTCTGCTGTCTCTTTCTTCTAAAGCATCCCTTCTTTCTTCTTGCTTCTAATTCTTAACAACCTTTTCTTGGCTGCCTCCTCCAGGTCTTGGAACTTCTCAAGAAAAATAGAGACATGCTCTTCAATGAGGTGACACACCAGTTTGTGTTTTATACAATTCTCGATTACTATAGTTTATTCTGCATTATTTTCTTTATACTCTATGCTTTCTTTTTGTTACTATTTTAGCTTATTCACCTTATTCCTCTCTTTCATTTCGCATTCTTGAATTTAGTAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAACGCAGGAGATTACTTGGAATTGACGACGACGATGCCCCAACAAGGGATGATTTAGCTATCACTCTTGAAGAAGTGAGAAATTTTAGGTTCTTTATACTCTATGCTTTCTTTTTGTTACTATCACTCTTGATTGATGATCATGTGTTTATAAGTAAAGAATACATGTCTATTGGTATGAGGCCTTTTGGAGAAACCAAAAGAAAAGCCACGAGAGCTTATGACTTTTAGTACAAAACATGTTGCCCCTCCAATCGATGCGGATGTTAGCTTTGATGTAGCTAAGTAATATAAGTAACATAGACCCAGGAAAAAGGAGATGTGGTAGAGCAGAAAGAGAATTGTAGAAGTAGCCTCTGTCGTGAAGTTTAGTAGCATTATTTTGTATTGTTAGTATTCACTTTCATTTGTTATTATACTAGGTCAATGAAGGAAAGTTCCCGAAAAATAGAGCAGCTCTCCAAATGCTTGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGTATTACCTGTTATTTGTCGCTTGAGTATTGAAAATTTTGAAACTTCGTGCTTGGCCTCATATAGTAAATCTTTTTTAAAATTAGACCTGAGGCTATATTTGGTTGGACTTCAACTTCTCCCATAATAATGCTATTGTGTCAGAGAGTAAAACACTAATTACAAATTGTTTTGGTGATTAAATGTGATGGCGCTAAATCATCTTTATACTAGAATGCAGTGGCTGATGGGTCTTCTTGTTAGAAATCAAGACTCTCCACAATGGTATGATATTGTCCATGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTACCACAAAAGGCCTTATACCAATGGAGATAGTATTTCTCACTTATAAACCCATGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAATCCTCAACAAAGTACACTATAAGCCTCCCCTTAATCGAGGCTTAACTCCTTTCTCTGGAGCCCTTGAACAAAGTACACCCTTTGTTCGACACTACAAAGTACACTATAAGTCTCCCCTTAATCGAGGCTTAACTCCTTTCTCTAGAGCCCTCGAACAACGTACACCCTTTGTTCGACACTACAAAGTACACTATAAGCCTCCCCTTAATCGAGGCTTAACTCCTTTCTCTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTTAGTCACTCTTGACATGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGAAATCACGACTCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCATGGCTGCTTTGGGCTTCCCCCAAAAGGCCTCGTACCAATGGAGATAGTATTCCTCACTTATAAATCGATGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAATCCTCAACAATAAGGGTTGAACAAACTCTCTGTGGGAAACACTCGCACTCTTTATTAAGACCAATTGAGAAAAGAATACAAGACACTCTGTAAAATACTACTTCATTTTATTGTTTTTGGATTTCTTGGATGAAAACCTAGGTAGGGTGGAAGGGTATTTATACTAGAGCCTATGCAATCTAGACCTAACAAATCTAAATCTTTTTCCTAAAATATATAGATCTCTCTACTCAAATATGTAGTATCTTTTCCTAAAATCTCTAGGAAAATAAATATACAATGGGTTCGTACAATTATTGGGCTAGTGATGATATTTCAACACTCCCCCTCAACACTAGTTCTCATTCGTTGCACCATGTTGAGTTGACAGCGAAAACTCTCATATTTGCTAGTATTCAGCCCTTTTGTAAACAAGTCTGCCACTTGGTCATTTGTCTTGATCTTCTACATCTCGATTTCTTCCTTTAGGACCTTCTCTCTAATGAAATGGTAGTGCACCTCCACATGCTTTGTTCTAGCATGAAACACCAGTTTTTCTGGTAGGCGAATCACAGATTGGTTGTCGCAATGAAGTAATATTGGATAGTCAATTTTCTGGTGCAAATCTTCCATCAAGAGTTTCAGTCATGTACCTTCCTGAGCTGCTCCAGCCGCTTCTCTATACTCAGCTTCTGTAGTTGATAATGATACTGTTGGTTGTCTCTTGCTATACCAAGAAATTGTTCCCGAACCAAACTTGAACACATACCCAGTGGTTGACCTCCGAGTATCGTGGTCTCCTGCATAGTCAGCATCACAGTATCCAACTAGCTTGCAGTCTTTGCTTCTTTTGTACAAAAGACCATAGTCGATTGTACCTTTGACATATCTCAAGATCTGTCGAGTTGCATCCAAATGAGGCTTCTTTGGACTTTACATGTACCGACTCATAACCCCAACTGCATAAGAGATATCAGGTCGAGTTAAAGTTAGGTAGATAAGACTACCTACTAGTTGTCGGTATGTCGTTTCATCGTTCATTTTGCCTTCATGTGCACAAATCTTGGCATTTGTCTCCATCGGTGTTGAAACTTGCTTGCACTCTAACATGTTGAACTTCTGAAGCATATCTCTTGTATACTTTTGTTGGCAGAGAAACAATGCTTCATATGTGCGATCAACTTCTAGGCCTAAGAAGTGTTTAAGCTCTTCTAGCTCTTTCATCTGAAAGCGTACTAATGAATTTTCTCTTGTTTGATAAATTTCTCTTTCGTCGTCCCCGGTGATAATCAAATCGTCCACATAGACCAACACAATTGCCAAATTTCCTTCTCTTTCTTTGATGAATAGGCTTGAGTCTGCATGTGCAACTGAATAACCACTTTGGGTAAGAAATTTAGCAATCTTGCCATACCAAGCTCTCGGTGCTTGTTTCAGTCCATAAAGAACTTTTCTAAACTTGCATACATAATTAGGATTAGCTGCACTCTCAAATCCCTTTGGTTGGTTCATATAAATCTCCCTGTCTAACTCTTCGTGCAAGAAGACATTCTTCACATTCATTTGCCACAGTTTCCAATCTTTACTTGCTGTGAGTGCTAGCAGGATTCGTACGGTAGTGACCTTTGCCACTGGACTAAATGTTTCATCATAGTCTTGTCCATATTGTTGAGAAAATCCTCGAGCCACGAGTCGAGCCTTGTATCTCTCGATTGATCCATCCGGTTGACGCTTTATTTTGTAGACCCACTTGCAAGAGATGGGTTTGACATCTCCTAGTCTTGGCACTAGTTCCCAAGTTTGATTCTACTCCAGGGCTATAATTTCTTCCTCCATCGCTTTCTGCCAAACCGAGTTTTGTGATGCTTCTTCATATGTCTCTGGTTCGTAAACTCTATCTTCTACAACAGCTGCATTTGCATACTTAGGATTTGGCCTTCGGATTCTATTTGACCGCCTAAGTTGTTGATGTGTCGTTTCATTTTTATCAGATTCGCTTGATTGAGTCACCTCTTGCATGTCAATATCAATGTCACTTGGATCTTCAGGTGCATCAACATTTGATTGAATTTGTGTAGTTTGCCCCCCCATCTTCTGTTGGAGAATTTCTTCGGTGTTTGAATTTGGTAAGGCTTTCTTCTCCGAGAACCACCATGAAGATGCTCCATTGAAACTACATCTCTTGATGTATAGTATTTTCCACTTGTTGGATCACAGCACCTCCATCCTTTCCTTTGATTGTCGTATCCAAAAAATACACACTTGACTGCTTTCTTGTCAAACTTGCTACATAGATGGGCAAATACAACCAAAAACTCGGAAGTAACTAACTGTAGGTTTCATATCCCATAGCATCTCAAATGGTGAGACGAATCCTAGCTTTGGTTGGGGAAGTTTGTTGATCACATGGGCAGTAGTTCGAATAGCTTCAGTCCAAAATCTTCTTGGAACATTCTTTGCGTGTAACATGCTTCAACATATTTCTGCAAGGTGTCGATTCTTTCTTTCTGCCACACCATTTTGTTGTGGCGTGTTGGCACATGTAAACTGATGTCGTATCCCACACTTGTGTAAATATTGATCGAACTCATCTGACGTGTATTCTCCGCCATTGTCTGAATGTAGGCAACGAATCTTCACTCCTACTTCTCTTTCGATCATCATCTTGAATTCTTGAAACTTTGAGAACGTGTCAAACTTTTCTTTCATAAAGAAAATCCACACATATCTTGAGTAGTCGTCAATAAACGTCACCATATACTGCATTCCACTGATCGATGCTTGTTTGACTGGGTCGAACAAATGAGAGTGAATTAACTCTAATGGTTTCTTTGCTTTGAAACTTGACTTTTTGCATGGTAATTGATGAGCTTTACCATATTGACATCCAGTGCAGACAATGTCTGTTTTGACTTCAAGTTGAGGGAGACCTTTGAGCATGGATTTCTCCATAATCAGCTTCAACTTATGGTAGCTAAAATGTCCCAATCTTGCATGCCATAGATATGTCGTCTCATTCTTTCAGGTCTTGTCAACATAGGCAGACTCTGCAGATAGGACGTAAACAGACTCCTTCTATTGTCGGCTTTCCTATTATCTTAACATCTTGATAAACTTTTACATCTTATGTCCCAAACAAGACGTAGCTTCCTAACGTTGTTAGTTGTAACACTGACAACAAGTTCTTCTTTATACCCGGTACATGATAAACATTATGTAGCGACACTGTATCAGACTTATTGCCAGGTATGATTGTCGTATTGTCGATTTGAGCAATTGATAACTGTGTGCTATTTGCTGTGCATACTATACGACTTCCTTTGTACTCTTTCTTGTCTTGCAATTTTCTCTGATCGCTAGTCATGTGCTTTGAACATCCTGAATCAACGATCTAGTCATTCTCGTAATCGATATGCTCTTCCATCATTGCCATGAGTGATAGCTCATCTTCTACTATGGGACATAGTACCTCTGCATCCCATTCATTCTCTATCTTCTTTTTGGATACTTTCAACCAACTTTTTCCTGGACCAACAATCTCTAGACATGTGACCCTTTTTCCCGCAATTATAGCAAATACCTCCAAATCTCTTTCCTTGGAAACTCTTATTGTTCTTTTAACTTCTCTCAGATTGTGTCGTTCCTTGGTGGCTTCTTCTTTTGTCACCATTATATCCACGTTTGGTAGACGGCCTATTATTGCTCCGACTTTCACTTGTGTAGAGTGCTTCTTCTTCATCGTGATGTCTCCCATTTGTTTACCCTAGCTTCTTGGCTGGCTAACAAATTTTCGAACTCTACAAGTGATGGTTGAATAGGTCATCCTTGTACAGCAGTAATAAAGCTTCTATATTCCGGTCGCAGTCTGTGGATTATAATCCTCTTTCTTCGAGATTCTACAATGGCAGACTTCGGGTCTAGTTTAGTAATCTCCGGACAGATCGACTTGACCTTGTGGAAGTACTGAGCAATCGTCATGTCACGTTGTGAAATTGACAACAACTCATTCTCAGAAGTTGTAGCCTCGTATCGTTCTTCTTTGAGAATAACATCACGAATGTGTCTCATGTTTCTTTCGGTGTCTTGTCATTCCAAAATATGTTCTAACATCTCTTCTCCAATTGTGGTCTTCAAGGCAAACATGTTTGCCTGCTTTGATTCTCAATTTGCACAAGGTGCCGTTAGAATCCTCCTCGTTGGCGGGTGTGAAACTACGCCGCTAGAGGAGGATTCTAACGGCGTAGTTTCACACCCGCCAACGATCTCCCAAAGATCCTGTCCTTGTAAATAGGACATCATGCATGTTGCTCATGTGTTGTAGTTGTTGTTGTTGAGTTTCTTGATTTCTCCAACGATTGGGAAATCACCTATTGTGTTGGTCATACCTCAGTAATACCAAACAAACTCTTTCGACACAAGACTTGCAGAGTCACAGACTACTCATGACACAAAAGAAACTCACTCACTACTAATCTCAAGAAATCATTTTATGAGGTGGAAGATCAGATAGAGCTGCAACCACAGAGCATACTAAGAATTCCAAGAGATCAGATAATTACACTAACCTCGCTCTGATACCAAATTGTTGAACACAACTCTCTGTGAGAAACACTCGCACTCTTTATTAACACCAATCGAGAAAAGAATACAAGACACGCTATAGAATACTACTCCATTTTATTGTTTTTGGATTTCTGGGATGAAAACCTAAGTAGGGTGGAGGGGTATTTATACTAAGCCTACGCAATCACCTAACAAATTTAAATCATTTTTCTAAAATATCTACTATCTTTTTTTAAAATCTCTACTAAAATAAATATACAACATACAATTATTGAGCTTGACTCTATTGGCTAGTGACGATATTTCAACTGACTATTTACTATTGTTTTGGCTCTAAATACTGTAGTTTGCTGTTGTAGGGCCAATACCAATCATCCTTTGGTCTACAGTAATAGCCCTGTCTGTGAATATCTAGATGAAGAGAGAGAACCTTAGTATGATCAATGGAGATCATGGCTATTGGCTATTGGATAGACGAGGAGATGTCGATGGATAATGGGAATAACAGAAAAGTAATTCTCGGGGCCGTTTTAATACTACTTTTCTAGTGATCTTTTGATTGTGATTCAAAAATTTTCTCCATGACACTTCAAACAATTCCAATTATCACCAAGTTTTCATTTAGAAATAAGGGCGGGATTTCTCAGAGAAATACGTGAGGAATAGCTTAATCCCAGATAAATACGTGAGGAATAACTAACTATGTGTTCTTTTCTTGGGATTGATTGGGATAGAAAGGATGGAAGGGTGGATGAGTATTAATAATATAGGTAGACAATTTATTACTCAAATATCTAAATCTTTTTTTCCTAAAATAGTGAATTATCAATTCTTATAATACCTAAATTATTTTCTTAAAATATCGAGATATTTTTATTTCTAAAATATTTAAATCATTTTTCTTCAAATAAATATACAATGGGCTCGATCAATTATTGGGCTTGACACGTTGGGCTAGTGATGATATTTTAACTTTTCCCTTTGCATTAGTCCTTGTTTGCTGCACCATGTTGAGCTGATAGCGAAAACCCTCACATTTGTCCGTATTTAGCTCTCTTGTAAACAAGTTTGTCACTTGGTCATTCGTATCCTTCTTTGATGTTCTCTCTAATAAAATGGTAATGCATCTCCACATGCTTTGTTCTGGCATAAAATCTCAAATGCTCTGCTAAGTGAACCACAAATTGGTTGTCGCAATGAAGTGGATGAAGTGGTATTAGAGAGTCAATTTTCTAATGCAAATCCTCCGTTAAGAGTTTGAGCCATGTATTTTCTTGAGCTACTCCAACTGTTGTTCTGCACTCCGCTTTTGTAGTTGACAATGATACTGTTAGTTGTCTTTTGCTACACCAAGAAATTGTTCTCAAATTGAGCTTGAACACATACCCGGTGCTTGATCTTTGAGTATCGTGATATCCTGCATAGTTAGCATCACAGTATCTAGCTAGCTTGCAGTCTTTGCTTCTTTTGTACAGAAGATCATAATTGATTGTACCTTTGACATATCTCGAGATCCGTCGAGCCACATCCAAATGACACTTCTTTGGACTTTGCATATACTGACTAATGACTCCAACTTCATTTTCAAATCCATTTGGTTGGTTCATGTAGATCTCCCAGTCCAACTCTCCAGGTAAGAAAACATTCTTCATATTAATCTCCCATAATTTTCAATCTTTATTTACCATAAGTGTGGGAGGAAGCTGTACGATAGGGATTTTTGTCACTGAACTAAATGTCTCATCATAGTCTAATCCATATCGTTGAGAGAACTCTCGAGCTACATGTTGAGTCTTGTATCTCTCGATTGATCCATCTGAGAGACACTTTGTTTTGTAAACCCACTTGTAAGAGATGAGTTTGATATCTCCTCGTCTTGGCATTAGTTCCCAAGTTTGATTTTGGTAAAGGCTATAATTTCTTACTTCATTGTCTGCTGCCAAGCCATATTTTATGATGCTTCTTCGTACGTCTCTAGCTTTTTAATTTTGTCCTATAATAGAAGTATTGACATACTTTGGATTTAGCTTTTGGGTTTTTACCGTCTAAGTTGTTGATGTGTCATTTATTTTTCATCGAGTTCACTTGATTGAGTCACTTCTTGCTCACCAACGTTAGTGTCACTTGGATCTTCAGGCACATCAACCCTTAAGCAAATGTGTGCAATTTGTTCCCTCATTTTCTGTGGTAGAATTTCTTCAATGTTGTCCAAGTCTGATAATATTTCCTTCTCCGAGAGCCACCCTGCTTCCATTGCATCACTTTGATCGTCAGTCATGTGACTTGAGCATCCTGAATCAATGATCCAGCCATCCTTGTAATCGACATGTTCTCTCATCATTGCCATGAGTGCTAGCTCATTTTCTTCTATGACACATATTGTCTATGTATTCCATTCCTCCTCCATCTCCATGTTGGAGGATGCCATGTTGCTTTCGACTTTTTCTTGGACCAATAATCCCTAGACATGTGACCCTTCTCCCTCCAATGGTAACAAATGCCTTCAAATCTCTTCCCTTGAAAGCTCTTGTTGTCGTTCTTCTGAGCTCTCCCTGGTTATGTCGTTTCTTGATGGCTTCTTTCTTTGTCACCATTTTTTTATCCATGTTTGGTAGACGGTTTATTGTTACCCCGATTTTCATTTGTGTAGAGTACTTATTCTTCCCCTTATGTGATGTCTCCCATTTGTTTAGTCATACCTTCTTGGCTGGCTAGCAAATTTTTAAACGCTAGTAGTGATGGTTGAGCAAACCATCTTTGTACAGAAATAACAATTCTAGTCGAAATCTGTGGATAATGATCTTCTTCATTCAAGCTTCTCCAATGACGGACTTTAGGTCTAGTTAAGTAATCTACTAACAGATCGACTTGACCTGTGGAAGTACTGAGAAATCGTCAAGTCACGTTGTAAAATTGATAACAGCTCGTTCTCCAGAAGTTGTAGTCTCGTATCGCTCTTCTTTGAGAAAAATATCATGAACATGTCCTATACTTCTTTCGTTGTCTTGTCATCCAAAATGTGTTCTAACATCTCTTCTCCGATAGTGGTTTTCAAGGCAAACATTACTCTGTCTGCTTTGATTCTCCATTTGCGCAAGGCACAATTAAAATCATCCTCTTGCAGCGTAGTTGTTGTTAAGTTTCTCGATTCCTCCAACGATTTGAATCACCCCACGTTGGCTATACCTCAATAATATCAAATAAGTTCTTTTGACAATAAACTTGCATACTTATGAACTACTCACGACACAAAGAAACTCACTCACTAAGAATCTCAAGAAATCGTTTTTGATGGGAAGATTAAATAAAGAGCATACTAAGAATTCCAAGACACTAGACAACCAACACTCACTTTGATACCAGATTGTTGAACAAATTCTTTTTGGTAAACACTCTTCTTTGGATTTCTTGGGACTGCTTGGGATGAAAACTTTGTATGGTGGAGTATTTAGAGTAGAGGCTAGAATAATTATTCCTATATCTAAATCATTTTCCTAAAATAAATATACATACTTATCATTATTGAGTTCGACCCCTATTGAAGTAGTGATTATTTTTGTCTTATATTTATGATTGTGCATACATACTTAGCCATGAATGCATGAGCTTCATTAACCCCATGGATTGAATAACAACTTAAGCAAAGTATTAACTATTGTCTAATGTAATTATGAGAAATGGTGTCTTCTTGTCCACACCCCAAATATGGAAACAAATTTCTGGTTCAAACAAGTCGTGGGGATTTTTATTTCTGCTGTTTACATTATCATCTGATAAGGGCCGGTCAGCATGGTTTTGTCTCCACTTTAGATTTTCTTGACATTTTTCTTCTATCCTCGTCGATTATGTTACTCGTACGTGTAGGTTGAGGCACCTAAGAAGAAACGCAGTAAATCTTTATATGCAAATGTCACAGACACGGGCGTGAATCCTCGAGAGGCTGCAAAGAGACTCAACATTGATTGGGATACTGCAGCTGAGCTTGAAGATGCCGACTTGAGTGAGGACCCAGAAGTGCCTGCAGCCGTGGTTTGTTTTCTTTGCCCATCATCAGAGACACTACTTTTAGTCCAACTTATTTATTATGATAATTCACTCCAGATATTATGGATTTGTCACTTCAATGTGGTTAGGAGTGTACTGGAATTTTGTTAATGGTAACTGAGAGTCAAAATCGTGAAAATAAAATTTTGCATGATATTACACCATTGCTGATGAGGAATCTAAAATTGATTTGATGCAGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCAGTGATAATTGGCATCTCAGTAGTTCTAATCCTGTTCTACAATTCTCTTCAATAG

mRNA sequence

GTCTCTGCAAAGTTGTTAGACCATTTATGTGTGTTGATGTCTTCCCAATTTCGAAAGGTTAAGGAAGTTGGTGACCTGAATACAGGGGAGTCGGCGGTTGAAGCCCCGGTGAATGGTGGGTATTACTATAATGGTCCTAAGATAATAATGGAAGTCATGGCTCTTCAACTCCGTCACTTCCCCCTGTCCCCTTCTCCTTCGTCTATCAAGCACAATTACAAAGCTTCTCGTTGTTTCCGCCATCTTCCCCTTCCCAATTATGCCTCTCGCCACCATCTTCCTGTTTCAAGTAGCCGCAATCGATGGGTTGTGGGCTGCGTTGGCAAGGAAGATACCCAATTGAGTCAATCATCGTCTACCGAAGCTGAACAGCCAGACGCCCAAGACCTAGAATACATTCGTCAGATTCAAAGGGTCTTGGAACTTCTCAAGAAAAATAGAGACATGCTCTTCAATGAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAACGCAGGAGATTACTTGGAATTGACGACGACGATGCCCCAACAAGGGATGATTTAGCTATCACTCTTGAAGAAGTCAATGAAGGAAAGTTCCCGAAAAATAGAGCAGCTCTCCAAATGCTTGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGTTGAGGCACCTAAGAAGAAACGCAGTAAATCTTTATATGCAAATGTCACAGACACGGGCGTGAATCCTCGAGAGGCTGCAAAGAGACTCAACATTGATTGGGATACTGCAGCTGAGCTTGAAGATGCCGACTTGAGTGAGGACCCAGAAGTGCCTGCAGCCGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCAGTGATAATTGGCATCTCAGTAGTTCTAATCCTGTTCTACAATTCTCTTCAATAG

Coding sequence (CDS)

GTCTCTGCAAAGTTGTTAGACCATTTATGTGTGTTGATGTCTTCCCAATTTCGAAAGGTTAAGGAAGTTGGTGACCTGAATACAGGGGAGTCGGCGGTTGAAGCCCCGGTGAATGGTGGGTATTACTATAATGGTCCTAAGATAATAATGGAAGTCATGGCTCTTCAACTCCGTCACTTCCCCCTGTCCCCTTCTCCTTCGTCTATCAAGCACAATTACAAAGCTTCTCGTTGTTTCCGCCATCTTCCCCTTCCCAATTATGCCTCTCGCCACCATCTTCCTGTTTCAAGTAGCCGCAATCGATGGGTTGTGGGCTGCGTTGGCAAGGAAGATACCCAATTGAGTCAATCATCGTCTACCGAAGCTGAACAGCCAGACGCCCAAGACCTAGAATACATTCGTCAGATTCAAAGGGTCTTGGAACTTCTCAAGAAAAATAGAGACATGCTCTTCAATGAGGTTAAACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAACGCAGGAGATTACTTGGAATTGACGACGACGATGCCCCAACAAGGGATGATTTAGCTATCACTCTTGAAGAAGTCAATGAAGGAAAGTTCCCGAAAAATAGAGCAGCTCTCCAAATGCTTGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGTTGAGGCACCTAAGAAGAAACGCAGTAAATCTTTATATGCAAATGTCACAGACACGGGCGTGAATCCTCGAGAGGCTGCAAAGAGACTCAACATTGATTGGGATACTGCAGCTGAGCTTGAAGATGCCGACTTGAGTGAGGACCCAGAAGTGCCTGCAGCCGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCAGTGATAATTGGCATCTCAGTAGTTCTAATCCTGTTCTACAATTCTCTTCAATAG

Protein sequence

VSAKLLDHLCVLMSSQFRKVKEVGDLNTGESAVEAPVNGGYYYNGPKIIMEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGKEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIGISVVLILFYNSLQ

Homology

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BLAST of CmaCh03G015100 vs. ExPASy Swiss-Prot
Match: E5KCJ8 (Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 5.1e-69
Identity = 155/263 (58.94%), Postives = 190/263 (72.24%), Query Frame = 0


Query: 55  LQLRHFPLSPSPSSIKHNYKA---------SRCFRHLPLPNYASRHHLPVSSSRNRWVVG 114
           LQL   PLS S SS+     +          R F    + NY  R  L  S+S       
Sbjct: 6   LQLSLPPLSSSSSSLPFLSSSVYVLPFTHQRRHFSFFNVQNY--RFRLSRSTSLGPLF-- 65

Query: 115 CVGKEDTQLSQSSSTEAE-----QPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMI 174
            V KE+   + + + E E      PD Q LEY+ QI+RVLELLK+NRDMLF EVKLT+MI
Sbjct: 66  -VNKEEDSATYAVTEEEEDNDDDDPDPQSLEYVSQIKRVLELLKRNRDMLFGEVKLTIMI 125

Query: 175 EDPREVERRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVE 234
           EDPR+VERRRLLGIDD++APTRDDLA  LEE+NEGK PK+ AALQMLAEEM +WPNLEVE
Sbjct: 126 EDPRDVERRRLLGIDDENAPTRDDLAAALEEINEGKVPKDFAALQMLAEEMNSWPNLEVE 185

Query: 235 APKK-KRSKSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALY 294
           A K+ K  +SLYA  TDTG++P+EAAKRL IDWD+AAE++++  S++P+VP A+GYGALY
Sbjct: 186 ATKQNKPGRSLYAKATDTGIDPKEAAKRLKIDWDSAAEIDESAESDEPDVPPALGYGALY 245

Query: 295 IVTAFPVIIGISVVLILFYNSLQ 303
           +V+AFP+IIGISVVLILFYNSLQ
Sbjct: 246 LVSAFPIIIGISVVLILFYNSLQ 263

[Close]

BLAST of CmaCh03G015100 vs. ExPASy Swiss-Prot
Match: B8AAV3 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=CEST PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 152/280 (54.29%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 57  LRHFPLSPS-------PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 116
           LR  P SP+       PSS+        C   LPLP+ A+      SS R R V   +G+
Sbjct: 16  LRRRPASPTLLAVATRPSSL---LSLPHCHCGLPLPSTANARAYSRSSRRRRRVAASLGQ 75

Query: 117 EDTQLSQSS----------------------STEAEQPDA--QDLEYIRQIQRVLELLKK 176
           ++  +S ++                      ++ AEQP+A  +DLE IRQ++RVLELL+K
Sbjct: 76  DEPGVSDTAVAPEGEGDSEPPASSDGAAGDIASSAEQPEASPEDLEDIRQVKRVLELLQK 135

Query: 177 NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQ 236
           NRDM F EVKLT+MIEDPR++ER+RLLGI+D D  TRDDLA  L EVNEG+ P+NR ALQ
Sbjct: 136 NRDMTFGEVKLTIMIEDPRDIERKRLLGIEDPDEITRDDLADALVEVNEGRIPENRVALQ 195

Query: 237 MLAEEMTNWPNLEVEAPKKKR--SKSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADL 296
           +LA+EMT WP+LE+EAPKKK    KS+YA  TDTG++P  AAKRLNIDWD+AA+L+D + 
Sbjct: 196 LLAKEMTEWPDLEMEAPKKKSKPGKSVYAKATDTGIDPETAAKRLNIDWDSAADLDDEEE 255

Query: 297 SED-PEVPAAVGYGALYIVTAFPVIIGISVVLILFYNSLQ 303
            +D  EVP+AVGY ALY++TAFPVIIGISVVLILFYNSLQ
Sbjct: 256 EDDETEVPSAVGYSALYLLTAFPVIIGISVVLILFYNSLQ 292

[Close]

BLAST of CmaCh03G015100 vs. ExPASy Swiss-Prot
Match: Q5VQK9 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CEST PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66
Identity = 152/280 (54.29%), Postives = 191/280 (68.21%), Query Frame = 0


Query: 57  LRHFPLSPS-------PSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 116
           LR  P SP+       PSS+        C   LPLP+ A+      SS R R V   +G+
Sbjct: 16  LRRRPASPTLLAVATRPSSL---LSLPHCHCGLPLPSTANARAYSRSSRRRRRVAASLGQ 75

Query: 117 EDTQLSQSS----------------------STEAEQPDA--QDLEYIRQIQRVLELLKK 176
           ++  +S ++                      +  AEQP+A  +DLE IRQ++RVLELL+K
Sbjct: 76  DEPGVSDTAVAPEGEGDSEPPASSDGAAGDIAASAEQPEASPEDLEDIRQVKRVLELLQK 135

Query: 177 NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQ 236
           NRDM F EVKLT+MIEDPR++ER+RLLGI+D D  TRDDLA  L EVNEG+ P+NR ALQ
Sbjct: 136 NRDMTFGEVKLTIMIEDPRDIERKRLLGIEDPDEITRDDLADALVEVNEGRIPENRVALQ 195

Query: 237 MLAEEMTNWPNLEVEAPKKKR--SKSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADL 296
           +LA+EMT WP+LE+EAPKKK    KS+YA  TDTG++P  AAKRLNIDWD+AA+L+D + 
Sbjct: 196 LLAKEMTEWPDLEMEAPKKKSKPGKSVYAKATDTGIDPETAAKRLNIDWDSAADLDDEEE 255

Query: 297 SED-PEVPAAVGYGALYIVTAFPVIIGISVVLILFYNSLQ 303
            +D  EVP+AVGY ALY++TAFPVIIGISVVLILFYNSLQ
Sbjct: 256 EDDETEVPSAVGYSALYLLTAFPVIIGISVVLILFYNSLQ 292

[Close]

BLAST of CmaCh03G015100 vs. ExPASy Swiss-Prot
Match: Q9LU01 (Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3IP1 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-61
Identity = 119/178 (66.85%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 126 DAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDL 185
           D +DL+Y+ +I+RV+ELL++NRDM+F+EVKLT+MIEDPRE+ERRRLLGI+D D P+RDDL
Sbjct: 103 DPEDLKYVNEIKRVIELLRRNRDMIFSEVKLTIMIEDPRELERRRLLGIEDADTPSRDDL 162

Query: 186 AITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYANVTDTGVNPREAA 245
           A  LE+VN+GK PK+RA L+ML EEM  WPNLEVE  KK+R KS+YA  TDTG++P+EAA
Sbjct: 163 AEALEQVNDGKIPKDRATLRMLHEEMIRWPNLEVEVSKKQRGKSMYAKSTDTGIDPKEAA 222

Query: 246 KRLNIDWDTAAELEDADLSEDPEVPAAV-GYGALYIVTAFPVIIGISVVLILFYNSLQ 303
           KRLN++WD+AA +E+ D+ ++  V   V GYGALY V+A PVIIGISVVLILFYNSLQ
Sbjct: 223 KRLNVEWDSAAAIEEVDVDDEQGVVTKVAGYGALYFVSALPVIIGISVVLILFYNSLQ 280

[Close]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL
Match: A0A6J1IQU0 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477600 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 109
           MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK
Sbjct: 1   MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 60

Query: 110 EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 169
           EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR
Sbjct: 61  EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 120

Query: 170 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 229
           RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS
Sbjct: 121 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 180

Query: 230 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 289
           LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG
Sbjct: 181 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 240

Query: 290 ISVVLILFYNSLQ 303
           ISVVLILFYNSLQ
Sbjct: 241 ISVVLILFYNSLQ 253

[Close]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL
Match: A0A6J1EC41 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432979 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.6e-132
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 109
           MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNR VVGCVGK
Sbjct: 1   MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCVGK 60

Query: 110 EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 169
           E+TQLSQSSSTE EQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR
Sbjct: 61  ENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 120

Query: 170 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 229
           RLLGIDD+DAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS
Sbjct: 121 RLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 180

Query: 230 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 289
           LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG
Sbjct: 181 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 240

Query: 290 ISVVLILFYNSLQ 303
           ISVVLILFYNSLQ
Sbjct: 241 ISVVLILFYNSLQ 253

[Close]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL
Match: A0A0A0KJ48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.9e-115
Identity = 223/254 (87.80%), Postives = 233/254 (91.73%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSP-SSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVG 109
           M VMALQLRHFPLS SP SSI+HNY  SR FR+LPLP++ +R HLPV SSRNR  + CVG
Sbjct: 1   MAVMALQLRHFPLSTSPSSSIEHNYDISRRFRYLPLPSHGTRPHLPVPSSRNRRSLACVG 60

Query: 110 KEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 169
           KEDTQL Q SST  EQP+AQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLRQPSSTTDEQPEAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 170 RRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 229
           RRLLGID+DDAPTRDDLA TLEEVNEGKFPKNR ALQMLAEEMTNWPNLE EAPKKKRSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKKRSK 180

Query: 230 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 289
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDADLS+DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFPVII 240

Query: 290 GISVVLILFYNSLQ 303
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL
Match: A0A1S3AYB4 (ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484231 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.1e-110
Identity = 215/254 (84.65%), Postives = 225/254 (88.58%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSP-SSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVG 109
           M VMALQLRHF LSPSP SSI+HNY+  R FR LPLP++   H L V SSRNR  + CVG
Sbjct: 1   MAVMALQLRHFSLSPSPSSSIEHNYEVYRRFRQLPLPSHGPHHRLLVPSSRNRRSLACVG 60

Query: 110 KEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 169
           KEDTQ  QSSST  EQPDAQ LEYI QI+RVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQFRQSSSTTDEQPDAQALEYIHQIRRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 170 RRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 229
           RRLLGID+DDAPTRDDLA TLEEVNEGKFPKNR ALQMLAEEMT WPNLE EAPKK+RSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTKWPNLEAEAPKKRRSK 180

Query: 230 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 289
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDADL +DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLGDDPEVPAAVGYGALYIVTAFPVII 240

Query: 290 GISVVLILFYNSLQ 303
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL
Match: A0A6J1CZ78 (ycf3-interacting protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015836 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.7e-105
Identity = 214/260 (82.31%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 50  MEVMALQLRHFPL-----SPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVV 109
           M+VMALQLRHFPL     S S SSI+ N KA R FRHLPLP+YA   HL + S+RN  +V
Sbjct: 1   MQVMALQLRHFPLSSSSSSSSSSSIERNCKAPR-FRHLPLPSYAPHQHLHLPSTRNPRIV 60

Query: 110 GCVGKEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPR 169
            CVGKEDTQL QSSST+ + PDAQDLEY+RQIQRVLELLKKNRDMLFNEVKLTVMIEDPR
Sbjct: 61  ACVGKEDTQLRQSSSTD-QHPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPR 120

Query: 170 EVERRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKK 229
           EVERRRLLGIDDDDAPTRDDLA TLEEVNEGKFPKNR AL+MLAEEM NWPNLEVEAP K
Sbjct: 121 EVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPKNRVALRMLAEEMINWPNLEVEAPTK 180

Query: 230 K--RSKSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVT 289
           K  RSKSLYA  TDTGV+P  AAKRLNIDWD+AAE+EDADLSEDPEVPAAVGYGALY+VT
Sbjct: 181 KERRSKSLYAKATDTGVDPLVAAKRLNIDWDSAAEIEDADLSEDPEVPAAVGYGALYMVT 240

Query: 290 AFPVIIGISVVLILFYNSLQ 303
           AFPVIIGISVVLILFYNSLQ
Sbjct: 241 AFPVIIGISVVLILFYNSLQ 258

[Close]

BLAST of CmaCh03G015100 vs. NCBI nr
Match: XP_022977224.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 2.3e-135
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 109
           MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK
Sbjct: 1   MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 60

Query: 110 EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 169
           EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR
Sbjct: 61  EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 120

Query: 170 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 229
           RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS
Sbjct: 121 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 180

Query: 230 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 289
           LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG
Sbjct: 181 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 240

Query: 290 ISVVLILFYNSLQ 303
           ISVVLILFYNSLQ
Sbjct: 241 ISVVLILFYNSLQ 253

[Close]

BLAST of CmaCh03G015100 vs. NCBI nr
Match: XP_022925592.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 5.4e-132
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 109
           MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNR VVGCVGK
Sbjct: 1   MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCVGK 60

Query: 110 EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 169
           E+TQLSQSSSTE EQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR
Sbjct: 61  ENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 120

Query: 170 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 229
           RLLGIDD+DAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS
Sbjct: 121 RLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 180

Query: 230 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 289
           LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG
Sbjct: 181 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 240

Query: 290 ISVVLILFYNSLQ 303
           ISVVLILFYNSLQ
Sbjct: 241 ISVVLILFYNSLQ 253

[Close]

BLAST of CmaCh03G015100 vs. NCBI nr
Match: XP_023544732.1 (ycf3-interacting protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130
Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 50  MEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGK 109
           MEVMALQL HFPLSPSPSSIKHNYKASRCFRHLP PNYASRHHLPVSSSRNR VVGCVGK
Sbjct: 1   MEVMALQLHHFPLSPSPSSIKHNYKASRCFRHLPHPNYASRHHLPVSSSRNRRVVGCVGK 60

Query: 110 EDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 169
           E+TQLSQSSSTE EQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR
Sbjct: 61  ENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERR 120

Query: 170 RLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 229
           RLLGIDD+DAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS
Sbjct: 121 RLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKS 180

Query: 230 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 289
           LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG
Sbjct: 181 LYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIG 240

Query: 290 ISVVLILFYNSLQ 303
           ISVVLILFYNSLQ
Sbjct: 241 ISVVLILFYNSLQ 253

[Close]

BLAST of CmaCh03G015100 vs. NCBI nr
Match: KAG6581535.1 (hypothetical protein SDJN03_21537, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476.1 bits (1224), Expect = 2.3e-130
Identity = 246/250 (98.40%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 53  MALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVGKEDT 112
           MALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNR VVGCVGKE+T
Sbjct: 1   MALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCVGKENT 60

Query: 113 QLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLL 172
           QLSQSSSTE EQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLL
Sbjct: 61  QLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLL 120

Query: 173 GIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYA 232
           GIDD+DAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYA
Sbjct: 121 GIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYA 180

Query: 233 NVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIGISV 292
           NVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIGISV
Sbjct: 181 NVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVIIGISV 240

Query: 293 VLILFYNSLQ 303
           VLILFYNSLQ
Sbjct: 241 VLILFYNSLQ 250

[Close]

BLAST of CmaCh03G015100 vs. NCBI nr
Match: KAG7034827.1 (hypothetical protein SDJN02_04559, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 472.2 bits (1214), Expect = 3.3e-129
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 48  IIMEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCV 107
           IIMEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNR VVGCV
Sbjct: 15  IIMEVMALQLRHFPLSPSPSSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCV 74

Query: 108 GKEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 167
           GKE+TQLSQSSSTE EQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE
Sbjct: 75  GKENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVE 134

Query: 168 RRRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 227
           RRRLLGIDD+DAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS
Sbjct: 135 RRRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRS 194

Query: 228 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 287
           KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI
Sbjct: 195 KSLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVI 254

Query: 288 IGISVVLIL 297
           IGISVVLIL
Sbjct: 255 IGISVVLIL 263

[Close]

BLAST of CmaCh03G015100 vs. TAIR 10
Match: AT5G44650.1 (Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. )

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62
Identity = 119/178 (66.85%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 126 DAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDL 185
           D +DL+Y+ +I+RV+ELL++NRDM+F+EVKLT+MIEDPRE+ERRRLLGI+D D P+RDDL
Sbjct: 103 DPEDLKYVNEIKRVIELLRRNRDMIFSEVKLTIMIEDPRELERRRLLGIEDADTPSRDDL 162

Query: 186 AITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSKSLYANVTDTGVNPREAA 245
           A  LE+VN+GK PK+RA L+ML EEM  WPNLEVE  KK+R KS+YA  TDTG++P+EAA
Sbjct: 163 AEALEQVNDGKIPKDRATLRMLHEEMIRWPNLEVEVSKKQRGKSMYAKSTDTGIDPKEAA 222

Query: 246 KRLNIDWDTAAELEDADLSEDPEVPAAV-GYGALYIVTAFPVIIGISVVLILFYNSLQ 303
           KRLN++WD+AA +E+ D+ ++  V   V GYGALY V+A PVIIGISVVLILFYNSLQ
Sbjct: 223 KRLNVEWDSAAAIEEVDVDDEQGVVTKVAGYGALYFVSALPVIIGISVVLILFYNSLQ 280

The following BLAST results are available for this feature:

BLAST of CmaCh03G015100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E5KCJ8	5.1e-69	58.94	Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2	[more]
B8AAV3	1.1e-66	54.29	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]
Q5VQK9	1.4e-66	54.29	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]
Q9LU01	1.8e-61	66.85	Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3I...	[more]

BLAST of CmaCh03G015100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQU0	1.1e-135	100.00	ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EC41	2.6e-132	98.42	ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0KJ48	4.9e-115	87.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1	[more]
A0A1S3AYB4	8.1e-110	84.65	ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1CZ78	2.7e-105	82.31	ycf3-interacting protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CmaCh03G015100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977224.1	2.3e-135	100.00	ycf3-interacting protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_022925592.1	5.4e-132	98.42	ycf3-interacting protein 1, chloroplastic [Cucurbita moschata]	[more]
XP_023544732.1	1.3e-130	97.63	ycf3-interacting protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo...	[more]
KAG6581535.1	2.3e-130	98.40	hypothetical protein SDJN03_21537, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034827.1	3.3e-129	98.39	hypothetical protein SDJN02_04559, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh03G015100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44650.1	1.3e-62	66.85	Encodes a chloroplast protein that induces tolerance to multiple environmental s...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	PANTHER	PTHR33672:SF3	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 77..302
IPR040340	Chloroplast enhancing stress tolerance protein	PANTHER	PTHR33672	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 77..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G015100.1	CmaCh03G015100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0080183	response to photooxidative stress
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane