CmaCh03G012260 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAATCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGTAACTATTGCAAATCTAGAAGGCTAATATGTACTATTTGATATAGCATATCAGAAGATCCTAGTTCTTTTTGCTCTAGCTGTTGATGTTCCTATGTTCCAAGGAGTAGGCAGAGTATGAGGGTAGAGGGAGGTGCGCTTTCCTCCAGTAATCATATACCTTCTGCTAGAAAATCCGAAGGACTAATAATGGTCATCCCTTAG ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAATCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGCAGAGTATGAGGGTAGAGGGAGGTGCGCTTTCCTCCAGTAATCATATACCTTCTGCTAGAAAATCCGAAGGACTAATAATGGTCATCCCTTAG ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAATCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGCAGAGTATGAGGGTAGAGGGAGGTGCGCTTTCCTCCAGTAATCATATACCTTCTGCTAGAAAATCCGAAGGACTAATAATGGTCATCCCTTAG MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQSKTAEENNSRKSNFKHPESGISNHHSLPREYFNEKGGASQGNDNGSGQSMRVEGGALSSSNHIPSARKSEGLIMVIP Homology
BLAST of CmaCh03G012260 vs. ExPASy TrEMBL
Match: A0A0A0KK82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446330 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26 Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of CmaCh03G012260 vs. ExPASy TrEMBL
Match: A0A5A7TVP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00070 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.3e-26 Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of CmaCh03G012260 vs. ExPASy TrEMBL
Match: A0A2P5FV74 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_024730 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of CmaCh03G012260 vs. ExPASy TrEMBL
Match: A0A2P5CH57 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153340 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 8.0e-05 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of CmaCh03G012260 vs. ExPASy TrEMBL
Match: A0A7N2M795 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of CmaCh03G012260 vs. NCBI nr
Match: KAG6604413.1 (hypothetical protein SDJN03_05022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41 Identity = 97/104 (93.27%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of CmaCh03G012260 vs. NCBI nr
Match: KAE8647398.1 (hypothetical protein Csa_003831 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31 Identity = 86/131 (65.65%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of CmaCh03G012260 vs. NCBI nr
Match: KAA0047240.1 (hypothetical protein E6C27_scaffold908G00330 [Cucumis melo var. makuwa] >TYK05876.1 hypothetical protein E5676_scaffold432G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25 Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of CmaCh03G012260 vs. NCBI nr
Match: POO01696.1 (hypothetical protein TorRG33x02_024730 [Trema orientale]) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of CmaCh03G012260 vs. NCBI nr
Match: PON60348.1 (hypothetical protein PanWU01x14_153340 [Parasponia andersonii]) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-04 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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