CmaCh03G010320 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G010320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionelongation of fatty acids protein 3-like
LocationCma_Chr03: 7177080 .. 7177973 (+)
RNA-Seq ExpressionCmaCh03G010320
SyntenyCmaCh03G010320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATCCACGACTTGGTCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGATGGAGCCACACTCATTCATGGGGTTCCACTTGGTCGTTCCTGTTCTCTTCCATAGCCTTTTACCTTGCCTTCGCCGTCGCCGTACACCTCTTCCTCAGCCTCCTCCTTAGCCCCGACCGCACTGTCCCGCTCGGCCCCATTCCAGCCATTCATTGCCTCTCCATGGCCCTAATCTCCACCCTCATCTCCGCCGGCATCCTCCTCTCCTCCGTCGCCGAGATCCGCGACACCCGGTGGTTCTGGCGGCGATCGAAAACCCCCTTCCAGTGGCTCCTCTGTTTCCCCTTAGGCACTCGGCCGTCTGGACGGGTGTTCTTCTGGTCGTACATCTACTACTTATCCCGATTCTTCCATATGTTCCGAACCATTTTCACCATTTTTGGCCATCGGAGACTGTCCTCCTTCCAGCTCTTCAACCACTCGATTTCGACGTTTATGTCCTTTCTGTGGCTCGAATTTTCGCAGTCGTTTCAGGTTTTGGCTATTCTCTCGACCTCGCTCGTGTACGCGGTGGTTTACGGGTATAGATTCTGGACGGCCATTGGATTACGAAGAGCCTGTTTCCCTTTTGTGGTAAACTGTCAATTCGTTCTGTTGGGTTGCAATTTAGCCTGCCATGTGGGGGTGTTGATGCTGCACTTCATGAAAGGTGGGTGCAACGGAATTGGGGCTTGGGTTTTCAATTCTGTGCTCAACGGTGCCATTTTGCTGCTTTTCTTGAACTTCTATCTCAAAATTCATCTGGGTAAGACGCAGGAATCAGTGAAGATCATCAAACACCACCCCTGTTCTTCAGGGAATTTAGAGAATCAATTGAAAGAGAAGAATCACTGA

mRNA sequence

ATGTTGATCCACGACTTGGTCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGATGGAGCCACACTCATTCATGGGGTTCCACTTGGTCGTTCCTGTTCTCTTCCATAGCCTTTTACCTTGCCTTCGCCGTCGCCGTACACCTCTTCCTCAGCCTCCTCCTTAGCCCCGACCGCACTGTCCCGCTCGGCCCCATTCCAGCCATTCATTGCCTCTCCATGGCCCTAATCTCCACCCTCATCTCCGCCGGCATCCTCCTCTCCTCCGTCGCCGAGATCCGCGACACCCGGTGGTTCTGGCGGCGATCGAAAACCCCCTTCCAGTGGCTCCTCTGTTTCCCCTTAGGCACTCGGCCGTCTGGACGGGTGTTCTTCTGGTCGTACATCTACTACTTATCCCGATTCTTCCATATGTTCCGAACCATTTTCACCATTTTTGGCCATCGGAGACTGTCCTCCTTCCAGCTCTTCAACCACTCGATTTCGACGTTTATGTCCTTTCTGTGGCTCGAATTTTCGCAGTCGTTTCAGGTTTTGGCTATTCTCTCGACCTCGCTCGTGTACGCGGTGGTTTACGGGTATAGATTCTGGACGGCCATTGGATTACGAAGAGCCTGTTTCCCTTTTGTGGTAAACTGTCAATTCGTTCTGTTGGGTTGCAATTTAGCCTGCCATGTGGGGGTGTTGATGCTGCACTTCATGAAAGGTGGGTGCAACGGAATTGGGGCTTGGGTTTTCAATTCTGTGCTCAACGGTGCCATTTTGCTGCTTTTCTTGAACTTCTATCTCAAAATTCATCTGGGTAAGACGCAGGAATCAGTGAAGATCATCAAACACCACCCCTGTTCTTCAGGGAATTTAGAGAATCAATTGAAAGAGAAGAATCACTGA

Coding sequence (CDS)

ATGTTGATCCACGACTTGGTCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGATGGAGCCACACTCATTCATGGGGTTCCACTTGGTCGTTCCTGTTCTCTTCCATAGCCTTTTACCTTGCCTTCGCCGTCGCCGTACACCTCTTCCTCAGCCTCCTCCTTAGCCCCGACCGCACTGTCCCGCTCGGCCCCATTCCAGCCATTCATTGCCTCTCCATGGCCCTAATCTCCACCCTCATCTCCGCCGGCATCCTCCTCTCCTCCGTCGCCGAGATCCGCGACACCCGGTGGTTCTGGCGGCGATCGAAAACCCCCTTCCAGTGGCTCCTCTGTTTCCCCTTAGGCACTCGGCCGTCTGGACGGGTGTTCTTCTGGTCGTACATCTACTACTTATCCCGATTCTTCCATATGTTCCGAACCATTTTCACCATTTTTGGCCATCGGAGACTGTCCTCCTTCCAGCTCTTCAACCACTCGATTTCGACGTTTATGTCCTTTCTGTGGCTCGAATTTTCGCAGTCGTTTCAGGTTTTGGCTATTCTCTCGACCTCGCTCGTGTACGCGGTGGTTTACGGGTATAGATTCTGGACGGCCATTGGATTACGAAGAGCCTGTTTCCCTTTTGTGGTAAACTGTCAATTCGTTCTGTTGGGTTGCAATTTAGCCTGCCATGTGGGGGTGTTGATGCTGCACTTCATGAAAGGTGGGTGCAACGGAATTGGGGCTTGGGTTTTCAATTCTGTGCTCAACGGTGCCATTTTGCTGCTTTTCTTGAACTTCTATCTCAAAATTCATCTGGGTAAGACGCAGGAATCAGTGAAGATCATCAAACACCACCCCTGTTCTTCAGGGAATTTAGAGAATCAATTGAAAGAGAAGAATCACTGA

Protein sequence

MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH
Homology
BLAST of CmaCh03G010320 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.8e-101
Identity = 183/269 (68.03%), Postives = 219/269 (81.41%), Query Frame = 0

Query: 2   LIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRT 61
           LI+ + Y+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y+A + ++H+ LS +   +R+
Sbjct: 5   LINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRS 64

Query: 62  VPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSK--TPFQWLLCFPLGTR 121
           VPLG IP IH L M+++S  I AGILLS+ AEIRDTRW WRRSK  TP QWLLCFPLGTR
Sbjct: 65  VPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTR 124

Query: 122 PSGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQV 181
           PSGRVFFWSY++YL+RF HMFRTIF +   RRL+  QLF +S+  F SFLWLEFSQS+Q+
Sbjct: 125 PSGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQI 184

Query: 182 LAILSTSLVYAVVYGYRFWTAIGLRRACFP-FVVNCQFVLLGCNLACHVGVLMLHFMKGG 241
           LAILST+LVY+VVYGYRFWT  GL  + FP FVVNCQ VL+GCNL  H GVL +H  KGG
Sbjct: 185 LAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGG 244

Query: 242 CNGIGAWVFNSVLNGAILLLFLNFYLKIH 268
           CNGIGAW  NSVLNGAILLLFLNFY+++H
Sbjct: 245 CNGIGAWGLNSVLNGAILLLFLNFYVRMH 273

BLAST of CmaCh03G010320 vs. ExPASy TrEMBL
Match: A0A6J1IMF1 (elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111478367 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 4.9e-168
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR
Sbjct: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 297

BLAST of CmaCh03G010320 vs. ExPASy TrEMBL
Match: A0A6J1GDI6 (elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111452998 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.0e-165
Identity = 292/297 (98.32%), Postives = 294/297 (98.99%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFA+ VHLFLSLLLSPDR
Sbjct: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAIVVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLS FQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGK+QESVKIIKHHPCSSGNLE QLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKSQESVKIIKHHPCSSGNLEIQLKEKNH 297

BLAST of CmaCh03G010320 vs. ExPASy TrEMBL
Match: A0A1S3B0F3 (elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.3e-147
Identity = 264/292 (90.41%), Postives = 275/292 (94.18%), Query Frame = 0

Query: 3   IHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTV 62
           I+D  YWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAF+ A+HLFL+LLL P R+V
Sbjct: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTALHLFLTLLLRPGRSV 67

Query: 63  PLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 122
           PLGPIPAIH LSMALISTLISAGILLSS+AEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG
Sbjct: 68  PLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 127

Query: 123 RVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAI 182
           RVFFWSYIYYLSRFFHMFRTIFTI   RRLS FQLFNHSISTFMSFLWLEFSQSFQVLAI
Sbjct: 128 RVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAI 187

Query: 183 LSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI 242
           LSTS+VYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFMKGGCNGI
Sbjct: 188 LSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFMKGGCNGI 247

Query: 243 GAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHH---PCSSGNLENQ 292
           GAW FNSVLNGAILLLFLNFYLKIHLG T++SVKIIKHH   P  SGNL+NQ
Sbjct: 248 GAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPACSGNLKNQ 299

BLAST of CmaCh03G010320 vs. ExPASy TrEMBL
Match: A0A0A0KL12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 262/292 (89.73%), Postives = 274/292 (93.84%), Query Frame = 0

Query: 3   IHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTV 62
           I+D  YWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLA + A+HLFL+LLL P R+V
Sbjct: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLLLRPGRSV 67

Query: 63  PLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 122
           PLGPIPAIH LSMALISTLISAGILLSS+AEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG
Sbjct: 68  PLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 127

Query: 123 RVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAI 182
           RVFFWSYIYYLSRFFHMFRTIFTI   RRLS FQLFNHSISTFMSF+WLEFSQSFQVLAI
Sbjct: 128 RVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFMWLEFSQSFQVLAI 187

Query: 183 LSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI 242
           LSTS+VYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFMKGGCNGI
Sbjct: 188 LSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFMKGGCNGI 247

Query: 243 GAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHH---PCSSGNLENQ 292
           GAW FNSVLNGAILLLFLNFYLKIHLG T++SVKIIKHH   P  SGNL+NQ
Sbjct: 248 GAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPPCSGNLKNQ 299

BLAST of CmaCh03G010320 vs. ExPASy TrEMBL
Match: A0A6J1HG46 (elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463259 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 263/297 (88.55%), Postives = 271/297 (91.25%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           M I DL YWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLA ++A+HLFLSLLL P R
Sbjct: 6   MPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLLLRPGR 65

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
            VPLGPIPAIHCLSMALISTLISAGILLSS AEIRDTRWFWRRSKTP QWLLCFPLGTRP
Sbjct: 66  PVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFPLGTRP 125

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTI   R LS FQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 126 SGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQVL 185

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSL+YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVLMLHFMKGGCN
Sbjct: 186 AILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFMKGGCN 245

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLE-NQLKEKN 297
           GIGAW FNSVLNGAILLLFLNFYLKIH+GKT+  VKI+K  PC SGNLE   LKEKN
Sbjct: 246 GIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPC-SGNLEAENLKEKN 301

BLAST of CmaCh03G010320 vs. NCBI nr
Match: XP_022978341.1 (elongation of fatty acids protein 3-like [Cucurbita maxima])

HSP 1 Score: 600.1 bits (1546), Expect = 1.0e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR
Sbjct: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 297

BLAST of CmaCh03G010320 vs. NCBI nr
Match: KAG6604229.1 (Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034388.1 Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.4 bits (1526), Expect = 2.1e-165
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFA+ VHLFLSLLLSPDR
Sbjct: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAIVVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLS FQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLE QLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLEIQLKEKNH 297

BLAST of CmaCh03G010320 vs. NCBI nr
Match: XP_022949674.1 (elongation of fatty acids protein 3-like [Cucurbita moschata])

HSP 1 Score: 590.9 bits (1522), Expect = 6.2e-165
Identity = 292/297 (98.32%), Postives = 294/297 (98.99%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFA+ VHLFLSLLLSPDR
Sbjct: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAIVVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLS FQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGK+QESVKIIKHHPCSSGNLE QLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKSQESVKIIKHHPCSSGNLEIQLKEKNH 297

BLAST of CmaCh03G010320 vs. NCBI nr
Match: XP_023544434.1 (elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 4.0e-164
Identity = 290/297 (97.64%), Postives = 293/297 (98.65%), Query Frame = 0

Query: 1   MLIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDR 60
           M IHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFY+AFA+ VHLFLSLLLSPDR
Sbjct: 1   MSIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYIAFAIVVHLFLSLLLSPDR 60

Query: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120
           TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP
Sbjct: 61  TVPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVL 180
           SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLS FQLFNHSISTFMSFLWLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 180

Query: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240
           AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCN 240

Query: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQLKEKNH 298
           GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQ+SVKIIKHHPCSSGNLE QLKEKNH
Sbjct: 241 GIGAWVFNSVLNGAILLLFLNFYLKIHLGKTQDSVKIIKHHPCSSGNLEIQLKEKNH 297

BLAST of CmaCh03G010320 vs. NCBI nr
Match: XP_038880984.1 (elongation of fatty acids protein 3-like [Benincasa hispida])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 263/289 (91.00%), Postives = 271/289 (93.77%), Query Frame = 0

Query: 3   IHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTV 62
           I+D  YWLSEHP+IVGFRWSHTHSWGSTWSFLFSSIAFYLAF+ AVHLFLSLLL P R V
Sbjct: 10  INDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTAVHLFLSLLLRPGRPV 69

Query: 63  PLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 122
           PLGPIPAIHCLSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG
Sbjct: 70  PLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 129

Query: 123 RVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAI 182
           RVFFWSYIYYLSRFFHMFRTIFTI   RRLS FQLFNHSISTFMSFLWLEFSQSFQVLAI
Sbjct: 130 RVFFWSYIYYLSRFFHMFRTIFTILRRRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAI 189

Query: 183 LSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI 242
           LSTS+VYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFMKGGCNGI
Sbjct: 190 LSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFMKGGCNGI 249

Query: 243 GAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQ 292
           GAW  NSVLNGAILLLFLNFYLKIHLGKT++S+KIIK H    GNLENQ
Sbjct: 250 GAWSLNSVLNGAILLLFLNFYLKIHLGKTEDSMKIIKPHQPCYGNLENQ 298

BLAST of CmaCh03G010320 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 369.4 bits (947), Expect = 2.7e-102
Identity = 183/269 (68.03%), Postives = 219/269 (81.41%), Query Frame = 0

Query: 2   LIHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRT 61
           LI+ + Y+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y+A + ++H+ LS +   +R+
Sbjct: 5   LINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRS 64

Query: 62  VPLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSK--TPFQWLLCFPLGTR 121
           VPLG IP IH L M+++S  I AGILLS+ AEIRDTRW WRRSK  TP QWLLCFPLGTR
Sbjct: 65  VPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTR 124

Query: 122 PSGRVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQV 181
           PSGRVFFWSY++YL+RF HMFRTIF +   RRL+  QLF +S+  F SFLWLEFSQS+Q+
Sbjct: 125 PSGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQI 184

Query: 182 LAILSTSLVYAVVYGYRFWTAIGLRRACFP-FVVNCQFVLLGCNLACHVGVLMLHFMKGG 241
           LAILST+LVY+VVYGYRFWT  GL  + FP FVVNCQ VL+GCNL  H GVL +H  KGG
Sbjct: 185 LAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGG 244

Query: 242 CNGIGAWVFNSVLNGAILLLFLNFYLKIH 268
           CNGIGAW  NSVLNGAILLLFLNFY+++H
Sbjct: 245 CNGIGAWGLNSVLNGAILLLFLNFYVRMH 273

BLAST of CmaCh03G010320 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 329.7 bits (844), Expect = 2.4e-90
Identity = 167/263 (63.50%), Postives = 203/263 (77.19%), Query Frame = 0

Query: 8   YWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPD---RTVPL 67
           Y+L+EHP+IV FRWS T S+ STWSFLF++++ Y+  AV +HL L + LS     R   L
Sbjct: 6   YYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRRRGFSL 65

Query: 68  GPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSK-TPFQWLLCFPLGTRPSGR 127
           GPIPA+H L++++IS +I  GILLS+ AEIRDTRW WRR++ T  QW LCFP+GTR SGR
Sbjct: 66  GPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASGR 125

Query: 128 VFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAIL 187
           VFFWSY +YLSRF H+FRT F++   R+LS FQL N S    +SFLWLE+SQSFQV+AIL
Sbjct: 126 VFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQVVAIL 185

Query: 188 STSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMK-GGCNGI 247
            T++ YAVVYGYRFWT IGLR ACFPFV NCQ +LLGC   CHVGVL +H +K GGCNGI
Sbjct: 186 LTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRGGCNGI 245

Query: 248 GAWVFNSVLNGAILLLFLNFYLK 266
           GAW+FNSVLN  I LL+L FY K
Sbjct: 246 GAWLFNSVLNAVITLLYLKFYCK 268

BLAST of CmaCh03G010320 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-30
Identity = 89/274 (32.48%), Postives = 138/274 (50.36%), Query Frame = 0

Query: 6   LVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTVPLG 65
           L YWL  HP I  F W    + GST  F+   ++ YL+    +   +  L S    + L 
Sbjct: 8   LTYWLVNHPYISNFTWIEGETLGSTVFFVSVVVSVYLSATFLLRSAIDSLPSLSPRI-LK 67

Query: 66  PIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVF 125
           PI A+H L + L+S +++ G  LS  +    +    R     F   +CFP+  +P+G +F
Sbjct: 68  PITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMAR-----FLHAICFPVDVKPNGPLF 127

Query: 126 FWSYIYYLSRFFHMFRTIFTIFGH--RRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAIL 185
           FW+ ++YLS+      TI  I G   +RLS   +++H+    M +LWL   QS   +A++
Sbjct: 128 FWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPIALV 187

Query: 186 STSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGIG 245
           + S V+ ++YGY F  A+G R      V +CQ V    +      +L  H    GC GI 
Sbjct: 188 TNSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHLFGSGCTGIW 247

Query: 246 AWVFNSVLNGAILLLFLNFYLKIHLGK-TQESVK 277
            W FN+  N ++L LF NF+ K ++ K T+E  K
Sbjct: 248 GWCFNAAFNASLLALFSNFHSKNYVKKPTREDGK 275

BLAST of CmaCh03G010320 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 115.5 bits (288), Expect = 7.1e-26
Identity = 81/263 (30.80%), Postives = 125/263 (47.53%), Query Frame = 0

Query: 6   LVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTVPLG 65
           L YWL  HP I  F W+   + GST  F+F  ++ YL+    +   +  L +    + L 
Sbjct: 8   LTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGPRI-LK 67

Query: 66  PIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVF 125
           PI A+H L + L+S  ++ G  LS ++            K      +CFPL  +P G +F
Sbjct: 68  PITAVHSLILFLLSLTMAVGCTLSLISS--------SDPKARLFDAVCFPLDVKPKGPLF 127

Query: 126 FWSYIYYLSRFFHMFRTIFTIFGH--RRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAIL 185
           FW+ ++YLS+      T+  I     +RLS   +++H+    + +LWL   QS   + ++
Sbjct: 128 FWAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVGLV 187

Query: 186 STSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVG-VLMLHFMKGGCNGI 245
             S V+ ++YGY F  AIG R      V N Q V     +      +L  H+   GC GI
Sbjct: 188 LNSTVHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEHYFGSGCAGI 247

Query: 246 GAWVFNSVLNGAILLLFLNFYLK 266
               FN V   ++L LF NF+ K
Sbjct: 248 WTVYFNGVFTASLLALFYNFHSK 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SYY43.8e-10168.03Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3... [more]
Match NameE-valueIdentityDescription
A0A6J1IMF14.9e-168100.00elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GDI63.0e-16598.32elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A1S3B0F36.3e-14790.41elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706... [more]
A0A0A0KL121.2e-14589.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1[more]
A0A6J1HG461.3e-14488.55elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
Match NameE-valueIdentityDescription
XP_022978341.11.0e-167100.00elongation of fatty acids protein 3-like [Cucurbita maxima][more]
KAG6604229.12.1e-16598.65Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperm... [more]
XP_022949674.16.2e-16598.32elongation of fatty acids protein 3-like [Cucurbita moschata][more]
XP_023544434.14.0e-16497.64elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_038880984.11.3e-14691.00elongation of fatty acids protein 3-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT4G36830.12.7e-10268.03GNS1/SUR4 membrane protein family [more]
AT1G75000.12.4e-9063.50GNS1/SUR4 membrane protein family [more]
AT3G06470.12.1e-3032.48GNS1/SUR4 membrane protein family [more]
AT3G06460.17.1e-2630.80GNS1/SUR4 membrane protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002076ELO familyPFAMPF01151ELOcoord: 29..272
e-value: 6.4E-29
score: 101.2
IPR002076ELO familyPANTHERPTHR11157FATTY ACID ACYL TRANSFERASE-RELATEDcoord: 5..277
NoneNo IPR availablePANTHERPTHR11157:SF11ELONGATION OF FATTY ACIDS PROTEIN 3-LIKEcoord: 5..277

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G010320.1CmaCh03G010320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009922 fatty acid elongase activity