CmaCh03G003910 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G003910
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 4382137 .. 4382513 (+)
RNA-Seq ExpressionCmaCh03G003910
SyntenyCmaCh03G003910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCTGTAATAACACAAGTGATCGGCGGGCGGCCAGAAGAAGTTCCATTATTGTAGGAGACCAGAAGCTCTCGAAACAGGGAGCTGGTAACTTGACGAATGGATTCATAGAGCTTCCCATCGAAAACATTGCGGGGTTCATCAGGCGGGAGGCCGTCAGAAACAGAGTCGAAGTGAAGCGTGGGAAGTTGGGCGGCGAGGCGGTTGAGGTCGTGGATGCGACGGTGGTGGTGGTCGGTGTTGAGGAAGGTGACACGGAGACCGGCGTTGCAGAGGAGCTGGGCGAGAGAGAAGAAGGGTTTGATGTGGCCTTTGGCCGGAAAGGGAAAAAGGAGGACATGATGGGTATGAGAAAGCTCCATGAAAATGGATGA

mRNA sequence

ATGACATCTGTAATAACACAAGTGATCGGCGGGCGGCCAGAAGAAGTTCCATTATTGCGGGAGGCCGTCAGAAACAGAGTCGAAGTGAAGCGTGGGAAGTTGGGCGGCGAGGCGGTTGAGGTCGTGGATGCGACGGTGGTGGTGGTCGGTGTTGAGGAAGGTGACACGGAGACCGGCGTTGCAGAGGAGCTGGGCGAGAGAGAAGAAGGGTTTGATGTGGCCTTTGGCCGGAAAGGGAAAAAGGAGGACATGATGGGTATGAGAAAGCTCCATGAAAATGGATGA

Coding sequence (CDS)

ATGACATCTGTAATAACACAAGTGATCGGCGGGCGGCCAGAAGAAGTTCCATTATTGCGGGAGGCCGTCAGAAACAGAGTCGAAGTGAAGCGTGGGAAGTTGGGCGGCGAGGCGGTTGAGGTCGTGGATGCGACGGTGGTGGTGGTCGGTGTTGAGGAAGGTGACACGGAGACCGGCGTTGCAGAGGAGCTGGGCGAGAGAGAAGAAGGGTTTGATGTGGCCTTTGGCCGGAAAGGGAAAAAGGAGGACATGATGGGTATGAGAAAGCTCCATGAAAATGGATGA

Protein sequence

MTSVITQVIGGRPEEVPLLREAVRNRVEVKRGKLGGEAVEVVDATVVVVGVEEGDTETGVAEELGEREEGFDVAFGRKGKKEDMMGMRKLHENG
Homology
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BLAST of CmaCh03G003910 vs. NCBI nr
Match: KAG6603616.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.0 bits (284), Expect = 7.0e-22
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 20  REAVRNRVEVKRGKLGGEAVEVVDATVVVVGVEEGDTETGVAEELGEREEGFDVAFGRKG 79
           REAVRNRVEVKRGKLGGEAVEVVDATVVVVGVEEGDTETGVAEELGEREEGFDVAFGRKG
Sbjct: 436 REAVRNRVEVKRGKLGGEAVEVVDATVVVVGVEEGDTETGVAEELGEREEGFDVAFGRKG 495

Query: 80  K 81
           K
Sbjct: 496 K 496

The following BLAST results are available for this feature:
BLAST of CmaCh03G003910 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G003910 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G003910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603616.17.0e-22100.0017.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. so... [more]
BLAST of CmaCh03G003910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G003910.1CmaCh03G003910.1mRNA