Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATAATGTAAAGAACAGTGTTGATCGTGCAGGTACGAGATCTTTATTTTTGTTCCCCTACATTCTTCTGTTCTGTTATCTTGAAAACTGGTGGATATTAATGGATGAAGAGAAGTTGAGCGTAGTTCTGTATGTGATGTGTCGTTGCTTCTTGAAATGTTTCAAGTTTTTTGAAGTCTTGATCAATTTCTTTCCATACTGAGCGGAAAATGTCCGAGACGAAATGTCTTAATATCTCAAGAGGCGAAAGAAAATATCGATTTAGAGGAAGCGGTGATTGTTTCTCTGCTAGTGATAATGCTTTCGGTGTTATTCCATCTGATTGTATTACTTTTTCCTTGTGTTTCTTGTTACAGAGTACACGGCCAGCGGTGAGTAATTTTTTTCGAGAAGTACGGAAATGGCGCTGAGAAGAAGTCGGTGATGTTTGCCTTAGAATTCATTTTTTACCTAACCATTTCTCGAGTTCATCTTTCCAAATTCTTATAGTAGATATAATGTATTCTTGTTCGTATTGCTATGGTTTTGCTAATATCACTCCACTGAAGCAATCTATATGCTAGATCCATTTTATGTGAATTAAAAATTTGCCTTAAACTTCCTGAGGATAGATAGAGGTTCACATTTCTTTTAGGAAAAAGCTGATGGTTGAGATAATTAACGATCAGTATTCAGCACAGTATGTAGACTTTTAGAACTGGTATACCGTTTTCTGCTTCCTATAGCTACAATAAGAGTTTCATTTTGGGAAATTTGATTCCATGAACAGGTATTTTCTAGATGATAACTACGTTTGCAATCTGTTTTTGATGAACAAACATCTCCGACATCCAATGGTCTCAAAGTATCTCATTTGTTGGAAACTAAATTATCCTGGCTTCCAGATATCATTCAAGATTTTATCTTGCCCAAGGGTGTTGAGGATTGTTGAAAGGGAGTCCACACTGGATAATTTAGGGAATGATCATGGGTTTGTAGGTAAGGAATACATCTTCATTGGTATGAGGCATTTTGGGGAAGTCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGATAGTCGTGATTCTTAACATGATACCTAATGTGCGTGGACTTTTTTTCTTTCTCACTTTTACCGTTAACATTTCTTCATTGAACTTTTTTGTTACGTGATGTTTTCCAAGCTAGAATATTTGGGAATATTTGGGTTCTAGTTGATTCATACAACTAGATGTATCCCGTTTTACTTATTTAATTTTTCTACAATAATCTTGTACTCCCAACGATCAGGATTTTTCCAGTACTTCTAGGTTTTCCTCTTCCCTCTTTTGATTCCCATCAGTTAGAAATTGTTCTGTCATGTGAAAAAGAGTAGAAAATATGAAAAGGACAATTGGATTATCCCTTTTTGAATCCAAGCAACCTCAAGGAGATTATAAAGAAGCTTTTCAATTGTAATGAATCATAAATTGGAAACGTTGTATGGGTGTACACCGACTAGAAGATAGAAAAGAAACCGTAAACTTTTTATGAGCATGTACTTTTGTTTGTCATATGGATTACAGCCAAGAGTTCATATCATATAGCCAATGAGCATTTTGGATATGACCAACCTGTGACAAAAACATCCATTAATGTTTGCTCAAGTTGTTTGTAGCTATACAGCCAGATGATCGGCCTTTCCAGGAGAGAGAAACAATAGGATCTTTAGAAGGGTGAGCAAGACGGTAGGGATGTTTGGTCCCTGGCTAGATTCTTTGTTTTCTTTTGGGCGTCGGTGTCAAATTCCTTTTGTTATTTATCCGCTCACATTTTGCTCGATTGGGGTTCCTTAATGGGAATGCCTCTTTTTGTTGGCTTGGTTATTTTGGATGTCTTTGTATTTATCTTCTTTTTTTCTCAATGAAAGTATGGTGGATTATCAGAAAAAATGATCGATAAAGTAATATCTCAATTTCTTTTTTCAGGCAGGATCTAGTTATACCTGCCATCTTACTTTTATATAATTTTCATTGCAGAATCAGTTTCAGACAACTACTTGCGGTACATGATACTGCCTCCCCACTAATATTGTTGGATGGATGTGTCACGCGTTGGTCACATCCAGTTCCTATAATTAGATGATTCAAAACTCAAATTCTACATAATTGATAGCTGTTTCTGAAAGTACAGTTTCATTCTATTATAACGCGGTTCTCTTAGCAAAATGGAAAAGAAAAGGTCATTAACATTATTTAAACCACTCTTTTATTGACTATTTGCAGGCAGTTGGTATATGCTCCTTCTCTGGAACTACTGCAGCCGCTTCTAATGCTGCCATCAGGTTTCTTAGTGTTTTTTTCCCACAACATTTTCGTGGCATTCTCTGTGACTGAGTAATCTTTGAGCTTATCTATGTAATACTTTCATATGTACGCACCAAAAGGCCTAATAATGGATACTTTGCACATTCTTTTGTCGTGTATTGTACCCTATGCAGTCATTGGTTTATTGTTTAAAATAATTCAAACTATTGTAATATAGTCTTGTAATGGACTCTAATGTAGGTTTTGTTTATTGAATTAGCAGATGGGTCACCAAGGATGGCATTGGAGCGGTTGGACGCTTATTCATTGGTCTGGAATCATAA
mRNA sequence
ATGGAGAAGATAATTCTTGATCAATTTCTTTCCATACTGAGCGGAAAATGTCCGAGACGAAATGTCTTAATATCTCAAGAGGCGAAAGAAAATATCGATTTAGAGGAAGCGAGTACACGGCCAGCGGCAGTTGGTATATGCTCCTTCTCTGGAACTACTGCAGCCGCTTCTAATGCTGCCATCAGATGGGTCACCAAGGATGGCATTGGAGCGGTTGGACGCTTATTCATTGGTCTGGAATCATAA
Coding sequence (CDS)
ATGGAGAAGATAATTCTTGATCAATTTCTTTCCATACTGAGCGGAAAATGTCCGAGACGAAATGTCTTAATATCTCAAGAGGCGAAAGAAAATATCGATTTAGAGGAAGCGAGTACACGGCCAGCGGCAGTTGGTATATGCTCCTTCTCTGGAACTACTGCAGCCGCTTCTAATGCTGCCATCAGATGGGTCACCAAGGATGGCATTGGAGCGGTTGGACGCTTATTCATTGGTCTGGAATCATAA
Protein sequence
MEKIILDQFLSILSGKCPRRNVLISQEAKENIDLEEASTRPAAVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIGLES
Homology
BLAST of CmaCh03G003500 vs. ExPASy Swiss-Prot
Match:
B6IDH3 (Protein root UVB sensitive 5 OS=Arabidopsis thaliana OX=3702 GN=RUS5 PE=2 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 1.3e-06
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 43 AVGICSFSGT----TAAASNAAIRWVTKDGIGAVGRLFIG 79
AVG+ SFSGT TAAAS AAIRWV+KDGIGA+GRL IG
Sbjct: 160 AVGVGSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIG 199
BLAST of CmaCh03G003500 vs. ExPASy TrEMBL
Match:
A0A1R3GVR4 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_22964 PE=3 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 9.1e-08
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query: 29 KENIDLEEASTRPAAVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
K+ L S+R AVG+ SFSGTTAAAS AAIRWV+KDGIGA+GRLFIG
Sbjct: 27 KQGKFLRYISSRTKAVGVSSFSGTTAAASAAAIRWVSKDGIGALGRLFIG 76
BLAST of CmaCh03G003500 vs. ExPASy TrEMBL
Match:
A0A445DFS2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g019255 PE=3 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 153 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 188
BLAST of CmaCh03G003500 vs. ExPASy TrEMBL
Match:
A0A445DFL0 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g019255 PE=3 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 153 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 188
BLAST of CmaCh03G003500 vs. ExPASy TrEMBL
Match:
A0A6P5NMG8 (protein root UVB sensitive 5 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107484902 PE=3 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 160 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 195
BLAST of CmaCh03G003500 vs. ExPASy TrEMBL
Match:
A0A6P4D8B9 (protein root UVB sensitive 5 isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107484902 PE=3 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 160 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 195
BLAST of CmaCh03G003500 vs. NCBI nr
Match:
OMO62194.1 (hypothetical protein CCACVL1_22964 [Corchorus capsularis])
HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query: 29 KENIDLEEASTRPAAVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
K+ L S+R AVG+ SFSGTTAAAS AAIRWV+KDGIGA+GRLFIG
Sbjct: 27 KQGKFLRYISSRTKAVGVSSFSGTTAAASAAAIRWVSKDGIGALGRLFIG 76
BLAST of CmaCh03G003500 vs. NCBI nr
Match:
QHO38927.1 (Protein root UVB sensitive [Arachis hypogaea])
HSP 1 Score: 64.7 bits (156), Expect = 4.2e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 160 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 195
BLAST of CmaCh03G003500 vs. NCBI nr
Match:
XP_020996273.1 (protein root UVB sensitive 5 isoform X2 [Arachis duranensis])
HSP 1 Score: 64.7 bits (156), Expect = 4.2e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 160 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 195
BLAST of CmaCh03G003500 vs. NCBI nr
Match:
XP_025695530.1 (protein root UVB sensitive 5 isoform X2 [Arachis hypogaea])
HSP 1 Score: 64.7 bits (156), Expect = 4.2e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 160 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 195
BLAST of CmaCh03G003500 vs. NCBI nr
Match:
RYR61971.1 (hypothetical protein Ahy_A04g019255 isoform A [Arachis hypogaea])
HSP 1 Score: 64.7 bits (156), Expect = 4.2e-07
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query: 43 AVGICSFSGTTAAASNAAIRWVTKDGIGAVGRLFIG 79
AVGI SFSGTTAAAS AAIRWVTKDGIGAVGRLFIG
Sbjct: 153 AVGIGSFSGTTAAASAAAIRWVTKDGIGAVGRLFIG 188
BLAST of CmaCh03G003500 vs. TAIR 10
Match:
AT5G01510.1 (Protein of unknown function, DUF647 )
HSP 1 Score: 53.5 bits (127), Expect = 9.0e-08
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 43 AVGICSFSGT----TAAASNAAIRWVTKDGIGAVGRLFIG 79
AVG+ SFSGT TAAAS AAIRWV+KDGIGA+GRL IG
Sbjct: 160 AVGVGSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIG 199
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
B6IDH3 | 1.3e-06 | 75.00 | Protein root UVB sensitive 5 OS=Arabidopsis thaliana OX=3702 GN=RUS5 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A1R3GVR4 | 9.1e-08 | 70.00 | Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_22964 PE=3 ... | [more] |
A0A445DFS2 | 2.0e-07 | 94.44 | Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g019255 PE=3 SV=1 | [more] |
A0A445DFL0 | 2.0e-07 | 94.44 | Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g019255 PE=3 SV=1 | [more] |
A0A6P5NMG8 | 2.0e-07 | 94.44 | protein root UVB sensitive 5 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC10... | [more] |
A0A6P4D8B9 | 2.0e-07 | 94.44 | protein root UVB sensitive 5 isoform X1 OS=Arachis duranensis OX=130453 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
OMO62194.1 | 1.9e-07 | 70.00 | hypothetical protein CCACVL1_22964 [Corchorus capsularis] | [more] |
QHO38927.1 | 4.2e-07 | 94.44 | Protein root UVB sensitive [Arachis hypogaea] | [more] |
XP_020996273.1 | 4.2e-07 | 94.44 | protein root UVB sensitive 5 isoform X2 [Arachis duranensis] | [more] |
XP_025695530.1 | 4.2e-07 | 94.44 | protein root UVB sensitive 5 isoform X2 [Arachis hypogaea] | [more] |
RYR61971.1 | 4.2e-07 | 94.44 | hypothetical protein Ahy_A04g019255 isoform A [Arachis hypogaea] | [more] |
Match Name | E-value | Identity | Description | |
AT5G01510.1 | 9.0e-08 | 75.00 | Protein of unknown function, DUF647 | [more] |