Homology
BLAST of CmaCh03G000020 vs. ExPASy Swiss-Prot
Match:
Q9M2Y4 (Pentatricopeptide repeat-containing protein At3g49740 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E84 PE=2 SV=1)
HSP 1 Score: 738.8 bits (1906), Expect = 6.1e-212
Identity = 384/753 (51.00%), Postives = 513/753 (68.13%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
M+K +SL I +++ LL NR L L RS +AL+LF +H C T+RPD
Sbjct: 1 MRKALCLTESLSAIAENS-TTLLNLNRRLTGLTRSGENRNALKLFADVH--RCTTLRPDQ 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Y++S A+ + RD FG Q+H YA+RSGL + HV+NT+LSLY + +L SLKK F E
Sbjct: 61 YSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
I+ PDVYSWTTLLSAS KLG IEYA EVFD MP+ + +VA WNA+IT
Sbjct: 121 IDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE--------------RDDVAIWNAMIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GC ESG ++ +F EMHK+GV+ DK+ FA ILS+C D G+QVHSLVIKAG+
Sbjct: 181 GCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIA 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
+SV+NALITMYF DA VFE T+ DQ+T+NV+IDGL RD E+L++F+ M
Sbjct: 241 SSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
A L PT+LT VS+M SCS + QVH AIK G+E +T V+N+ +TMYSS +F AA
Sbjct: 301 LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
+ VF++L +KDL++WN MISS+ + GKSA+ + +M G+ PDEFTFGSLL S +
Sbjct: 361 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
D+++M A + K GL IE NAL+S+Y K G+I +A +F KNLISWN +I GF
Sbjct: 421 DVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLK--PSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFS 540
NG P + LE FS L+ S+++ P +TLS +LSIC + S+L +G Q H Y+LR G F
Sbjct: 481 YHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 540
Query: 541 ETSVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQ 600
ET + N LI MYS+CG + SL VFN M ++D++SWNS+ISAY++HG+G+ AV +K MQ
Sbjct: 541 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 600
Query: 601 DMSPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGN 660
D +PD ATF+ VLSACSHAGLV+E +IF +M+ ++ V+ +VD C+VDLLGR+G+
Sbjct: 601 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 660
Query: 661 IDQAESAIESAQ--YGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLS 720
+D+AES ++ ++ G VWWALFSACAAHG+L+LG+ VA +L+EKE+D+PSVYV LS
Sbjct: 661 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 720
Query: 721 NIYATAGCWQEAANVRELIKKTGAIKQPGCSWI 750
NIYA AG W+EA R I GA+KQ GCSW+
Sbjct: 721 NIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
BLAST of CmaCh03G000020 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 363.6 bits (932), Expect = 5.3e-99
Identity = 201/603 (33.33%), Postives = 333/603 (55.22%), Query Frame = 0
Query: 155 GHIEYTDEVFEKMPKGNVACWNAVITGCAESGRDWVAISIFYEMHKMGVKPDKYSFACI- 214
G ++ VF+++ WN ++ A+SG +I +F +M GV+ D Y+F+C+
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 215 LSLCTKQVEDLGRQVHSLVIKAGYLSKASVINALITMYFCSDNQEDAFEVFEGTEAVFHD 274
S + + G Q+H ++K+G+ + SV N+L+ Y + + A +VF+ E D
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD--EMTERD 262
Query: 275 QITYNVMIDGLICVGRDEEALIMFKDMQRACLSPTELTLVSIMSSCS---FVRVAQQVHS 334
I++N +I+G + G E+ L +F M + + T+VS+ + C+ + + + VHS
Sbjct: 263 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 322
Query: 335 HAIKLGFESFTSVANSAITMYSSCGEFQAANAVFQTLRDKDLISWNAMISSHVRGNFGKS 394
+K F N+ + MYS CG+ +A AVF+ + D+ ++S+ +MI+ + R
Sbjct: 323 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 382
Query: 395 AVLTFLQMQRTGIGPDEFTFGSLLGVSEFIDIVD---MAHALVYKNGLILVIETLNALVS 454
AV F +M+ GI PD +T ++L ++D H + +N L I NAL+
Sbjct: 383 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 442
Query: 455 SYLKCGKITQAHQVFSGINPKNLISWNTVIYGFLLNGLPLQALEHFSELIMSK-LKPSTF 514
Y KCG + +A VFS + K++ISWNT+I G+ N +AL F+ L+ K P
Sbjct: 443 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 502
Query: 515 TLSIVLSICSNISTLDIGKQIHGYILRSGNFSETSVCNGLITMYSKCGLLDWSLRVFNVM 574
T++ VL C+++S D G++IHGYI+R+G FS+ V N L+ MY+KCG L + +F+ +
Sbjct: 503 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 562
Query: 575 IKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQATFTTVLSACSHAGLVDEA 634
+D++SW +I+ Y HG GKEA+ F M+ + D+ +F ++L ACSH+GLVDE
Sbjct: 563 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEG 622
Query: 635 GQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIESAQYGEHTQVWWALFSACA 694
+ F M + P+V+ CIVD+L R+G++ +A IE+ +W AL C
Sbjct: 623 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 682
Query: 695 AHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYATAGCWQEAANVRELIKKTGAIKQPGC 750
H +++L VA + E E +N YV+++NIYA A W++ +R+ I + G K PGC
Sbjct: 683 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 742
BLAST of CmaCh03G000020 vs. ExPASy Swiss-Prot
Match:
Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 353.6 bits (906), Expect = 5.5e-96
Identity = 227/740 (30.68%), Postives = 374/740 (50.54%), Query Frame = 0
Query: 16 KSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDHYNLSTALAVCANFRD 75
KS R+ Y LL R R +A +LF IH + D S+ L V A D
Sbjct: 52 KSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR---LGMEMDCSIFSSVLKVSATLCD 111
Query: 76 IAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQEIENPDVYSWTTLLSA 135
FG QLH ++ G V +++ Y K + + +K F E++ +V +WTTL+S
Sbjct: 112 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS- 171
Query: 136 STKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVITGCAESGRDWVAISIF 195
G A + + +++F
Sbjct: 172 ---------------------------------------------GYARNSMNDEVLTLF 231
Query: 196 YEMHKMGVKPDKYSFACILSLCTKQ-VEDLGRQVHSLVIKAGYLSKASVINALITMYFCS 255
M G +P+ ++FA L + ++ V G QVH++V+K G V N+LI +Y
Sbjct: 232 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 291
Query: 256 DNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDMQRACLSPTELTLVS 315
N A +F+ TE +T+N MI G G D EAL MF M+ + +E + S
Sbjct: 292 GNVRKARILFDKTEV--KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 351
Query: 316 IMSSCS---FVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAANAVFQTLR-DK 375
++ C+ +R +Q+H +K GF ++ + + YS C A +F+ +
Sbjct: 352 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 411
Query: 376 DLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFIDIVDMAHALV 435
+++SW AMIS ++ + + AV F +M+R G+ P+EFT+ +L I ++ HA V
Sbjct: 412 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV-HAQV 471
Query: 436 YKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGFLLNGLPLQAL 495
K AL+ +Y+K GK+ +A +VFSGI+ K++++W+ ++ G+ G A+
Sbjct: 472 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 531
Query: 496 EHFSELIMSKLKPSTFTLSIVLSIC-SNISTLDIGKQIHGYILRSGNFSETSVCNGLITM 555
+ F EL +KP+ FT S +L++C + +++ GKQ HG+ ++S S V + L+TM
Sbjct: 532 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 591
Query: 556 YSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQAT 615
Y+K G ++ + VF ++D++SWNS+IS YAQHGQ +A+ FK M+ M D T
Sbjct: 592 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM-DGVT 651
Query: 616 FTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIESA 675
F V +AC+HAGLV+E + F+ M+ + P+ + C+VDL R+G +++A IE+
Sbjct: 652 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 711
Query: 676 QYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYATAGCWQEAA 735
+ +W + +AC H LGR A ++ + ++ + YV+LSN+YA +G WQE A
Sbjct: 712 PNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERA 738
Query: 736 NVRELIKKTGAIKQPGCSWI 750
VR+L+ + K+PG SWI
Sbjct: 772 KVRKLMNERNVKKEPGYSWI 738
BLAST of CmaCh03G000020 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 349.0 bits (894), Expect = 1.4e-94
Identity = 242/861 (28.11%), Postives = 392/861 (45.53%), Query Frame = 0
Query: 20 RNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDHYNLSTALAVCANFRDIAFG 79
+++ +N +L+ + L+ F + + F P+ + S L+ CA ++ FG
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF---PNKFTFSIVLSTCARETNVEFG 182
Query: 80 SQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQEIENPDVYSWTTLLSASTKL 139
Q+H ++ GL+ + ++ +YAK + + ++ F+ I +P+ WT L S K
Sbjct: 183 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 242
Query: 140 GHIEYADEVFDIM-PKGH-------------------IEYTDEVFEKMPKGNVACWNAVI 199
G E A VF+ M +GH ++ +F +M +V WN +I
Sbjct: 243 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMI 302
Query: 200 TGCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVE-DLGRQVHSLVIKAGYL 259
+G + G + VAI F+ M K VK + + +LS DLG VH+ IK G
Sbjct: 303 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 362
Query: 260 SKASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFK 319
S V ++L++MY + E A +VFE E + + +N MI G G + + +F
Sbjct: 363 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEE--KNDVFWNAMIRGYAHNGESHKVMELFM 422
Query: 320 DMQRACLSPTELTLVSIMSSCSF---VRVAQQVHSHAIKLGFESFTSVANSAITMYSSCG 379
DM+ + + + T S++S+C+ + + Q HS IK V N+ + MY+ CG
Sbjct: 423 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 482
Query: 380 EFQAANAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLG 439
+ A +F+ + D+D ++WN +I S+V+ A F +M GI D S L
Sbjct: 483 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 542
Query: 440 VSEFIDIV---DMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLIS 499
+ + H L K GL + T ++L+ Y KCG I A +VFS + +++S
Sbjct: 543 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 602
Query: 500 WNTVIYGFLLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYIL 559
N +I G+ N L +A+ F E++ + PS T + ++ C +L +G Q HG I
Sbjct: 603 MNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 662
Query: 560 RSGNFSE------------------TSVC------------------------------- 619
+ G SE T C
Sbjct: 663 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 722
Query: 620 ------------------------------------------------------NGLITM 679
N LI M
Sbjct: 723 LKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 782
Query: 680 YSKCGLLDWSLRVFNVMIKR-DIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQA 739
Y+KCG + S +VF+ M +R +++SWNS+I+ YA++G ++A++ F +M+ S MPD+
Sbjct: 783 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEI 842
Query: 740 TFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIES 750
TF VL+ACSHAG V + +IFE M+ Y + VD + C+VDLLGR G + +A+ IE+
Sbjct: 843 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 902
BLAST of CmaCh03G000020 vs. ExPASy Swiss-Prot
Match:
Q9LU94 (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E46 PE=3 SV=2)
HSP 1 Score: 348.6 bits (893), Expect = 1.8e-94
Identity = 218/652 (33.44%), Postives = 345/652 (52.91%), Query Frame = 0
Query: 111 LESLKKGFQEIENPDVYSWTTLLSASTKLGHIEYADEVFDIMPK-GHIEYTDEVFEKMPK 170
LES FQ++ Y+ + I ++ + D K G + Y + +F++MPK
Sbjct: 9 LESSLNSFQKLSLTHCYA-----IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK 68
Query: 171 GNVACWNAVITGCAESGRDWVAISIFYEMHKMGVKPDKYSFACIL-SLCTKQVEDLGRQV 230
+ WN +I+G G+ A +F M + G D YSF+ +L + + + DLG QV
Sbjct: 69 RDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV 128
Query: 231 HSLVIKAGYLSKASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVG 290
H LVIK GY V ++L+ MY + EDAFE F+ E + +++N +I G + V
Sbjct: 129 HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK--EISEPNSVSWNALIAGFVQVR 188
Query: 291 RDEEA--LIMFKDMQRACL--SPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVA 350
+ A L+ +M+ A + T L++++ F + +QVH+ +KLG + ++
Sbjct: 189 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITIC 248
Query: 351 NSAITMYSSCGEFQAANAVFQTL-RDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGI 410
N+ I+ Y+ CG A VF L KDLISWN+MI+ + +SA F+QMQR +
Sbjct: 249 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 308
Query: 411 GPDEFTFGSLLGV---SEFIDIVDMAHALVYKNGLILVIETLNALVSSYLK--CGKITQA 470
D +T+ LL E H +V K GL V NAL+S Y++ G + A
Sbjct: 309 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 368
Query: 471 HQVFSGINPKNLISWNTVIYGFLLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNI 530
+F + K+LISWN++I GF GL A++ FS L S++K + S +L CS++
Sbjct: 369 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDL 428
Query: 531 STLDIGKQIHGYILRSGNFSETSVCNGLITMYSKCGLLDWSLRVF-NVMIKRDIISWNSV 590
+TL +G+QIH +SG S V + LI MYSKCG+++ + + F + K ++WN++
Sbjct: 429 ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 488
Query: 591 ISAYAQHGQGKEAVRCFKAMQDMSPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYY 650
I YAQHG G+ ++ F M + + + D TFT +L+ACSH GL+ E ++ M Y
Sbjct: 489 ILGYAQHGLGQVSLDLFSQMCNQNVKL-DHVTFTAILTACSHTGLIQEGLELLNLMEPVY 548
Query: 651 HVVPSVDQLCCIVDLLGRSGNIDQAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSV 710
+ P ++ VDLLGR+G +++A+ IES V C A G + + V
Sbjct: 549 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 608
Query: 711 AGILLEKERDNPSVYVVLSNIYATAGCWQEAANVRELIKKTGAIKQPGCSWI 750
A LLE E ++ YV LS++Y+ W+E A+V++++K+ G K PG SWI
Sbjct: 609 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
BLAST of CmaCh03G000020 vs. ExPASy TrEMBL
Match:
A0A6J1HSY7 (pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467168 PE=4 SV=1)
HSP 1 Score: 1505.7 bits (3897), Expect = 0.0e+00
Identity = 750/750 (100.00%), Postives = 750/750 (100.00%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
TAGCWQEAANVRELIKKTGAIKQPGCSWIS
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 750
BLAST of CmaCh03G000020 vs. ExPASy TrEMBL
Match:
A0A6J1HRM1 (pentatricopeptide repeat-containing protein At3g49740 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467168 PE=4 SV=1)
HSP 1 Score: 1504.2 bits (3893), Expect = 0.0e+00
Identity = 749/749 (100.00%), Postives = 749/749 (100.00%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 750
TAGCWQEAANVRELIKKTGAIKQPGCSWI
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 749
BLAST of CmaCh03G000020 vs. ExPASy TrEMBL
Match:
A0A6J1F3Z9 (pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439870 PE=4 SV=1)
HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 741/750 (98.80%), Postives = 745/750 (99.33%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGH+EYADEVFDIMPKGHIEYTDEVF+KMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHVEYADEVFDIMPKGHIEYTDEVFDKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDN EDAFEVFEGTEAVFHDQITYNVMIDGL+CVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNHEDAFEVFEGTEAVFHDQITYNVMIDGLVCVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDM HA VYKNGLILVIETLNALVSSY KCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMGHAFVYKNGLILVIETLNALVSSYSKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLS+CSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSLCSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSG ID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
TAGCWQEAANVRELIKKTGAIKQPGCSWIS
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 750
BLAST of CmaCh03G000020 vs. ExPASy TrEMBL
Match:
A0A6J1F3R8 (pentatricopeptide repeat-containing protein At3g49740 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439870 PE=4 SV=1)
HSP 1 Score: 1491.1 bits (3859), Expect = 0.0e+00
Identity = 740/749 (98.80%), Postives = 744/749 (99.33%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGH+EYADEVFDIMPKGHIEYTDEVF+KMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHVEYADEVFDIMPKGHIEYTDEVFDKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDN EDAFEVFEGTEAVFHDQITYNVMIDGL+CVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNHEDAFEVFEGTEAVFHDQITYNVMIDGLVCVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDM HA VYKNGLILVIETLNALVSSY KCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMGHAFVYKNGLILVIETLNALVSSYSKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLS+CSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSLCSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSG ID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 750
TAGCWQEAANVRELIKKTGAIKQPGCSWI
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 749
BLAST of CmaCh03G000020 vs. ExPASy TrEMBL
Match:
A0A1S4DXC2 (pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491437 PE=4 SV=1)
HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 617/750 (82.27%), Postives = 671/750 (89.47%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYA+ SLKTI +SA ++LLEYNRLLAELKRSSRY D+LQLFTQIHSS+C I+PDH
Sbjct: 1 MKKLQYAMHSLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSYCSNIKPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLST LAVCANFRDIAFGSQLHGYA+RSGLKFYPHVANT+LSLY+K ED SLK+GFQE
Sbjct: 61 YNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYSKIEDFVSLKRGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IE PDVYSWTTLLSA K+GHIEYA E+FDI MPKGNVACWNA+IT
Sbjct: 121 IEKPDVYSWTTLLSACMKMGHIEYASEMFDI---------------MPKGNVACWNAMIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
G AESG DWVA++ FYEMHKMGVKPD YSFACILSLCTK++EDLGRQVHS VIKAGYL K
Sbjct: 181 GSAESGHDWVAMNTFYEMHKMGVKPDNYSFACILSLCTKEIEDLGRQVHSSVIKAGYLRK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
SVINALITMYF +N EDA+EVFEGTE+ HDQITYNVMIDGL+C+ R+EEALIMFKDM
Sbjct: 241 TSVINALITMYFSIENLEDAYEVFEGTESEVHDQITYNVMIDGLVCIRRNEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
+RACLSPTELT VSIMSSCS +RVAQQVHS AIKLGFESFT V NS ITMYSSCGEFQAA
Sbjct: 301 KRACLSPTELTFVSIMSSCSIIRVAQQVHSQAIKLGFESFTLVGNSTITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQ L +KDLISWNA+ISS+V+GNFGKSAVL FLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
+I++M HA VYKNGLILVIE LNALVS+Y KC K+ Q+HQVFS IN KNLISWNTVIYGF
Sbjct: 421 EILEMVHAFVYKNGLILVIEILNALVSAYAKCRKVKQSHQVFSEINSKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLP QALEHFS+LIMSKLKPSTFTLSIVLSIC+NISTLDIGKQIHGYILRSGN SET
Sbjct: 481 LLNGLPFQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
S+CNGLITMYSKCGLL WSL+ FNVMI+RDI+SWNS+ISAYAQHGQGKEAV CFKAM+DM
Sbjct: 541 SLCNGLITMYSKCGLLGWSLKTFNVMIERDIVSWNSIISAYAQHGQGKEAVHCFKAMRDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
MPDQATFTT+LSACSHAGLV+EA QI + ML YHVVPS+DQL CIVDL+GRSG ID
Sbjct: 601 PSIMPDQATFTTILSACSHAGLVEEACQILDTMLIDYHVVPSMDQLSCIVDLIGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAES IESAQYGEHT VWWALFSACAAH NLRLGR VA ILLEKER+NPSVYVVLSNIYA
Sbjct: 661 QAESVIESAQYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERENPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
+AGCW+EAANVRELIKKTG++KQPGCSWIS
Sbjct: 721 SAGCWEEAANVRELIKKTGSMKQPGCSWIS 735
BLAST of CmaCh03G000020 vs. NCBI nr
Match:
XP_022967731.1 (pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita maxima] >XP_022967733.1 pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita maxima] >XP_022967734.1 pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1505.7 bits (3897), Expect = 0.0e+00
Identity = 750/750 (100.00%), Postives = 750/750 (100.00%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
TAGCWQEAANVRELIKKTGAIKQPGCSWIS
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 750
BLAST of CmaCh03G000020 vs. NCBI nr
Match:
XP_022967732.1 (pentatricopeptide repeat-containing protein At3g49740 isoform X2 [Cucurbita maxima])
HSP 1 Score: 1504.2 bits (3893), Expect = 0.0e+00
Identity = 749/749 (100.00%), Postives = 749/749 (100.00%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 750
TAGCWQEAANVRELIKKTGAIKQPGCSWI
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 749
BLAST of CmaCh03G000020 vs. NCBI nr
Match:
XP_022933102.1 (pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita moschata] >XP_022933104.1 pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita moschata] >XP_022933105.1 pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 741/750 (98.80%), Postives = 745/750 (99.33%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGH+EYADEVFDIMPKGHIEYTDEVF+KMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHVEYADEVFDIMPKGHIEYTDEVFDKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDN EDAFEVFEGTEAVFHDQITYNVMIDGL+CVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNHEDAFEVFEGTEAVFHDQITYNVMIDGLVCVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDM HA VYKNGLILVIETLNALVSSY KCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMGHAFVYKNGLILVIETLNALVSSYSKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLS+CSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSLCSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSG ID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
TAGCWQEAANVRELIKKTGAIKQPGCSWIS
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 750
BLAST of CmaCh03G000020 vs. NCBI nr
Match:
XP_022933103.1 (pentatricopeptide repeat-containing protein At3g49740 isoform X2 [Cucurbita moschata])
HSP 1 Score: 1491.1 bits (3859), Expect = 0.0e+00
Identity = 740/749 (98.80%), Postives = 744/749 (99.33%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGH+EYADEVFDIMPKGHIEYTDEVF+KMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHVEYADEVFDIMPKGHIEYTDEVFDKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCSDN EDAFEVFEGTEAVFHDQITYNVMIDGL+CVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSDNHEDAFEVFEGTEAVFHDQITYNVMIDGLVCVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDM HA VYKNGLILVIETLNALVSSY KCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMGHAFVYKNGLILVIETLNALVSSYSKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLS+CSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSLCSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSG ID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 750
TAGCWQEAANVRELIKKTGAIKQPGCSWI
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWI 749
BLAST of CmaCh03G000020 vs. NCBI nr
Match:
XP_023543368.1 (pentatricopeptide repeat-containing protein At3g49740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1490.3 bits (3857), Expect = 0.0e+00
Identity = 742/750 (98.93%), Postives = 744/750 (99.20%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH
Sbjct: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
YNLSTALAVCANFRDIAFGSQLH YAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE
Sbjct: 61 YNLSTALAVCANFRDIAFGSQLHSYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVF+KMPKGNVACWNAVIT
Sbjct: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFDKMPKGNVACWNAVIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK
Sbjct: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
ASVINALITMYFCS N EDAFEVFEGTEAVFHDQITYNVMIDGL+CVGRDEEALIMFKDM
Sbjct: 241 ASVINALITMYFCSGNHEDAFEVFEGTEAVFHDQITYNVMIDGLVCVGRDEEALIMFKDM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA
Sbjct: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI
Sbjct: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
DIVDMAHA VYKNGLILVIETLNALVSSY KCGKITQAHQVFSGINPKNLISWNTVIYGF
Sbjct: 421 DIVDMAHAFVYKNGLILVIETLNALVSSYSKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET
Sbjct: 481 LLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFSET 540
Query: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM
Sbjct: 541 SVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDM 600
Query: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNID 660
SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSG ID
Sbjct: 601 SPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGYID 660
Query: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA
Sbjct: 661 QAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYA 720
Query: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 751
TAGCWQEAANVRELIKKTGAIKQPGCSWIS
Sbjct: 721 TAGCWQEAANVRELIKKTGAIKQPGCSWIS 750
BLAST of CmaCh03G000020 vs. TAIR 10
Match:
AT3G49740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 738.8 bits (1906), Expect = 4.3e-213
Identity = 384/753 (51.00%), Postives = 513/753 (68.13%), Query Frame = 0
Query: 1 MKKLQYAIQSLKTITKSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDH 60
M+K +SL I +++ LL NR L L RS +AL+LF +H C T+RPD
Sbjct: 1 MRKALCLTESLSAIAENS-TTLLNLNRRLTGLTRSGENRNALKLFADVH--RCTTLRPDQ 60
Query: 61 YNLSTALAVCANFRDIAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQE 120
Y++S A+ + RD FG Q+H YA+RSGL + HV+NT+LSLY + +L SLKK F E
Sbjct: 61 YSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDE 120
Query: 121 IENPDVYSWTTLLSASTKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVIT 180
I+ PDVYSWTTLLSAS KLG IEYA EVFD MP+ + +VA WNA+IT
Sbjct: 121 IDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE--------------RDDVAIWNAMIT 180
Query: 181 GCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVEDLGRQVHSLVIKAGYLSK 240
GC ESG ++ +F EMHK+GV+ DK+ FA ILS+C D G+QVHSLVIKAG+
Sbjct: 181 GCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIA 240
Query: 241 ASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDM 300
+SV+NALITMYF DA VFE T+ DQ+T+NV+IDGL RD E+L++F+ M
Sbjct: 241 SSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKM 300
Query: 301 QRACLSPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAA 360
A L PT+LT VS+M SCS + QVH AIK G+E +T V+N+ +TMYSS +F AA
Sbjct: 301 LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 360
Query: 361 NAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFI 420
+ VF++L +KDL++WN MISS+ + GKSA+ + +M G+ PDEFTFGSLL S +
Sbjct: 361 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 420
Query: 421 DIVDMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGF 480
D+++M A + K GL IE NAL+S+Y K G+I +A +F KNLISWN +I GF
Sbjct: 421 DVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 480
Query: 481 LLNGLPLQALEHFSELIMSKLK--PSTFTLSIVLSICSNISTLDIGKQIHGYILRSGNFS 540
NG P + LE FS L+ S+++ P +TLS +LSIC + S+L +G Q H Y+LR G F
Sbjct: 481 YHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 540
Query: 541 ETSVCNGLITMYSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQ 600
ET + N LI MYS+CG + SL VFN M ++D++SWNS+ISAY++HG+G+ AV +K MQ
Sbjct: 541 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 600
Query: 601 DMSPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGN 660
D +PD ATF+ VLSACSHAGLV+E +IF +M+ ++ V+ +VD C+VDLLGR+G+
Sbjct: 601 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 660
Query: 661 IDQAESAIESAQ--YGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLS 720
+D+AES ++ ++ G VWWALFSACAAHG+L+LG+ VA +L+EKE+D+PSVYV LS
Sbjct: 661 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 720
Query: 721 NIYATAGCWQEAANVRELIKKTGAIKQPGCSWI 750
NIYA AG W+EA R I GA+KQ GCSW+
Sbjct: 721 NIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
BLAST of CmaCh03G000020 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 363.6 bits (932), Expect = 3.8e-100
Identity = 201/603 (33.33%), Postives = 333/603 (55.22%), Query Frame = 0
Query: 155 GHIEYTDEVFEKMPKGNVACWNAVITGCAESGRDWVAISIFYEMHKMGVKPDKYSFACI- 214
G ++ VF+++ WN ++ A+SG +I +F +M GV+ D Y+F+C+
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 215 LSLCTKQVEDLGRQVHSLVIKAGYLSKASVINALITMYFCSDNQEDAFEVFEGTEAVFHD 274
S + + G Q+H ++K+G+ + SV N+L+ Y + + A +VF+ E D
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD--EMTERD 262
Query: 275 QITYNVMIDGLICVGRDEEALIMFKDMQRACLSPTELTLVSIMSSCS---FVRVAQQVHS 334
I++N +I+G + G E+ L +F M + + T+VS+ + C+ + + + VHS
Sbjct: 263 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 322
Query: 335 HAIKLGFESFTSVANSAITMYSSCGEFQAANAVFQTLRDKDLISWNAMISSHVRGNFGKS 394
+K F N+ + MYS CG+ +A AVF+ + D+ ++S+ +MI+ + R
Sbjct: 323 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 382
Query: 395 AVLTFLQMQRTGIGPDEFTFGSLLGVSEFIDIVD---MAHALVYKNGLILVIETLNALVS 454
AV F +M+ GI PD +T ++L ++D H + +N L I NAL+
Sbjct: 383 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 442
Query: 455 SYLKCGKITQAHQVFSGINPKNLISWNTVIYGFLLNGLPLQALEHFSELIMSK-LKPSTF 514
Y KCG + +A VFS + K++ISWNT+I G+ N +AL F+ L+ K P
Sbjct: 443 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 502
Query: 515 TLSIVLSICSNISTLDIGKQIHGYILRSGNFSETSVCNGLITMYSKCGLLDWSLRVFNVM 574
T++ VL C+++S D G++IHGYI+R+G FS+ V N L+ MY+KCG L + +F+ +
Sbjct: 503 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 562
Query: 575 IKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQATFTTVLSACSHAGLVDEA 634
+D++SW +I+ Y HG GKEA+ F M+ + D+ +F ++L ACSH+GLVDE
Sbjct: 563 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEG 622
Query: 635 GQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIESAQYGEHTQVWWALFSACA 694
+ F M + P+V+ CIVD+L R+G++ +A IE+ +W AL C
Sbjct: 623 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 682
Query: 695 AHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYATAGCWQEAANVRELIKKTGAIKQPGC 750
H +++L VA + E E +N YV+++NIYA A W++ +R+ I + G K PGC
Sbjct: 683 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 742
BLAST of CmaCh03G000020 vs. TAIR 10
Match:
AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 353.6 bits (906), Expect = 3.9e-97
Identity = 227/740 (30.68%), Postives = 374/740 (50.54%), Query Frame = 0
Query: 16 KSAPRNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDHYNLSTALAVCANFRD 75
KS R+ Y LL R R +A +LF IH + D S+ L V A D
Sbjct: 52 KSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR---LGMEMDCSIFSSVLKVSATLCD 111
Query: 76 IAFGSQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQEIENPDVYSWTTLLSA 135
FG QLH ++ G V +++ Y K + + +K F E++ +V +WTTL+S
Sbjct: 112 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS- 171
Query: 136 STKLGHIEYADEVFDIMPKGHIEYTDEVFEKMPKGNVACWNAVITGCAESGRDWVAISIF 195
G A + + +++F
Sbjct: 172 ---------------------------------------------GYARNSMNDEVLTLF 231
Query: 196 YEMHKMGVKPDKYSFACILSLCTKQ-VEDLGRQVHSLVIKAGYLSKASVINALITMYFCS 255
M G +P+ ++FA L + ++ V G QVH++V+K G V N+LI +Y
Sbjct: 232 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 291
Query: 256 DNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFKDMQRACLSPTELTLVS 315
N A +F+ TE +T+N MI G G D EAL MF M+ + +E + S
Sbjct: 292 GNVRKARILFDKTEV--KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 351
Query: 316 IMSSCS---FVRVAQQVHSHAIKLGFESFTSVANSAITMYSSCGEFQAANAVFQTLR-DK 375
++ C+ +R +Q+H +K GF ++ + + YS C A +F+ +
Sbjct: 352 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 411
Query: 376 DLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLGVSEFIDIVDMAHALV 435
+++SW AMIS ++ + + AV F +M+R G+ P+EFT+ +L I ++ HA V
Sbjct: 412 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV-HAQV 471
Query: 436 YKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLISWNTVIYGFLLNGLPLQAL 495
K AL+ +Y+K GK+ +A +VFSGI+ K++++W+ ++ G+ G A+
Sbjct: 472 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 531
Query: 496 EHFSELIMSKLKPSTFTLSIVLSIC-SNISTLDIGKQIHGYILRSGNFSETSVCNGLITM 555
+ F EL +KP+ FT S +L++C + +++ GKQ HG+ ++S S V + L+TM
Sbjct: 532 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 591
Query: 556 YSKCGLLDWSLRVFNVMIKRDIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQAT 615
Y+K G ++ + VF ++D++SWNS+IS YAQHGQ +A+ FK M+ M D T
Sbjct: 592 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM-DGVT 651
Query: 616 FTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIESA 675
F V +AC+HAGLV+E + F+ M+ + P+ + C+VDL R+G +++A IE+
Sbjct: 652 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 711
Query: 676 QYGEHTQVWWALFSACAAHGNLRLGRSVAGILLEKERDNPSVYVVLSNIYATAGCWQEAA 735
+ +W + +AC H LGR A ++ + ++ + YV+LSN+YA +G WQE A
Sbjct: 712 PNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERA 738
Query: 736 NVRELIKKTGAIKQPGCSWI 750
VR+L+ + K+PG SWI
Sbjct: 772 KVRKLMNERNVKKEPGYSWI 738
BLAST of CmaCh03G000020 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 349.0 bits (894), Expect = 9.6e-96
Identity = 242/861 (28.11%), Postives = 392/861 (45.53%), Query Frame = 0
Query: 20 RNLLEYNRLLAELKRSSRYFDALQLFTQIHSSHCFTIRPDHYNLSTALAVCANFRDIAFG 79
+++ +N +L+ + L+ F + + F P+ + S L+ CA ++ FG
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF---PNKFTFSIVLSTCARETNVEFG 182
Query: 80 SQLHGYAVRSGLKFYPHVANTILSLYAKTEDLESLKKGFQEIENPDVYSWTTLLSASTKL 139
Q+H ++ GL+ + ++ +YAK + + ++ F+ I +P+ WT L S K
Sbjct: 183 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 242
Query: 140 GHIEYADEVFDIM-PKGH-------------------IEYTDEVFEKMPKGNVACWNAVI 199
G E A VF+ M +GH ++ +F +M +V WN +I
Sbjct: 243 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMI 302
Query: 200 TGCAESGRDWVAISIFYEMHKMGVKPDKYSFACILSLCTKQVE-DLGRQVHSLVIKAGYL 259
+G + G + VAI F+ M K VK + + +LS DLG VH+ IK G
Sbjct: 303 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 362
Query: 260 SKASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVGRDEEALIMFK 319
S V ++L++MY + E A +VFE E + + +N MI G G + + +F
Sbjct: 363 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEE--KNDVFWNAMIRGYAHNGESHKVMELFM 422
Query: 320 DMQRACLSPTELTLVSIMSSCSF---VRVAQQVHSHAIKLGFESFTSVANSAITMYSSCG 379
DM+ + + + T S++S+C+ + + Q HS IK V N+ + MY+ CG
Sbjct: 423 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 482
Query: 380 EFQAANAVFQTLRDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGIGPDEFTFGSLLG 439
+ A +F+ + D+D ++WN +I S+V+ A F +M GI D S L
Sbjct: 483 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 542
Query: 440 VSEFIDIV---DMAHALVYKNGLILVIETLNALVSSYLKCGKITQAHQVFSGINPKNLIS 499
+ + H L K GL + T ++L+ Y KCG I A +VFS + +++S
Sbjct: 543 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 602
Query: 500 WNTVIYGFLLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNISTLDIGKQIHGYIL 559
N +I G+ N L +A+ F E++ + PS T + ++ C +L +G Q HG I
Sbjct: 603 MNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 662
Query: 560 RSGNFSE------------------TSVC------------------------------- 619
+ G SE T C
Sbjct: 663 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 722
Query: 620 ------------------------------------------------------NGLITM 679
N LI M
Sbjct: 723 LKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 782
Query: 680 YSKCGLLDWSLRVFNVMIKR-DIISWNSVISAYAQHGQGKEAVRCFKAMQDMSPFMPDQA 739
Y+KCG + S +VF+ M +R +++SWNS+I+ YA++G ++A++ F +M+ S MPD+
Sbjct: 783 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEI 842
Query: 740 TFTTVLSACSHAGLVDEAGQIFEAMLTYYHVVPSVDQLCCIVDLLGRSGNIDQAESAIES 750
TF VL+ACSHAG V + +IFE M+ Y + VD + C+VDLLGR G + +A+ IE+
Sbjct: 843 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 902
BLAST of CmaCh03G000020 vs. TAIR 10
Match:
AT3G25970.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 348.6 bits (893), Expect = 1.3e-95
Identity = 218/652 (33.44%), Postives = 345/652 (52.91%), Query Frame = 0
Query: 111 LESLKKGFQEIENPDVYSWTTLLSASTKLGHIEYADEVFDIMPK-GHIEYTDEVFEKMPK 170
LES FQ++ Y+ + I ++ + D K G + Y + +F++MPK
Sbjct: 9 LESSLNSFQKLSLTHCYA-----IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK 68
Query: 171 GNVACWNAVITGCAESGRDWVAISIFYEMHKMGVKPDKYSFACIL-SLCTKQVEDLGRQV 230
+ WN +I+G G+ A +F M + G D YSF+ +L + + + DLG QV
Sbjct: 69 RDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV 128
Query: 231 HSLVIKAGYLSKASVINALITMYFCSDNQEDAFEVFEGTEAVFHDQITYNVMIDGLICVG 290
H LVIK GY V ++L+ MY + EDAFE F+ E + +++N +I G + V
Sbjct: 129 HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK--EISEPNSVSWNALIAGFVQVR 188
Query: 291 RDEEA--LIMFKDMQRACL--SPTELTLVSIMSSCSFVRVAQQVHSHAIKLGFESFTSVA 350
+ A L+ +M+ A + T L++++ F + +QVH+ +KLG + ++
Sbjct: 189 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITIC 248
Query: 351 NSAITMYSSCGEFQAANAVFQTL-RDKDLISWNAMISSHVRGNFGKSAVLTFLQMQRTGI 410
N+ I+ Y+ CG A VF L KDLISWN+MI+ + +SA F+QMQR +
Sbjct: 249 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 308
Query: 411 GPDEFTFGSLLGV---SEFIDIVDMAHALVYKNGLILVIETLNALVSSYLK--CGKITQA 470
D +T+ LL E H +V K GL V NAL+S Y++ G + A
Sbjct: 309 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 368
Query: 471 HQVFSGINPKNLISWNTVIYGFLLNGLPLQALEHFSELIMSKLKPSTFTLSIVLSICSNI 530
+F + K+LISWN++I GF GL A++ FS L S++K + S +L CS++
Sbjct: 369 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDL 428
Query: 531 STLDIGKQIHGYILRSGNFSETSVCNGLITMYSKCGLLDWSLRVF-NVMIKRDIISWNSV 590
+TL +G+QIH +SG S V + LI MYSKCG+++ + + F + K ++WN++
Sbjct: 429 ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 488
Query: 591 ISAYAQHGQGKEAVRCFKAMQDMSPFMPDQATFTTVLSACSHAGLVDEAGQIFEAMLTYY 650
I YAQHG G+ ++ F M + + + D TFT +L+ACSH GL+ E ++ M Y
Sbjct: 489 ILGYAQHGLGQVSLDLFSQMCNQNVKL-DHVTFTAILTACSHTGLIQEGLELLNLMEPVY 548
Query: 651 HVVPSVDQLCCIVDLLGRSGNIDQAESAIESAQYGEHTQVWWALFSACAAHGNLRLGRSV 710
+ P ++ VDLLGR+G +++A+ IES V C A G + + V
Sbjct: 549 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 608
Query: 711 AGILLEKERDNPSVYVVLSNIYATAGCWQEAANVRELIKKTGAIKQPGCSWI 750
A LLE E ++ YV LS++Y+ W+E A+V++++K+ G K PG SWI
Sbjct: 609 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9M2Y4 | 6.1e-212 | 51.00 | Pentatricopeptide repeat-containing protein At3g49740 OS=Arabidopsis thaliana OX... | [more] |
| Q9SN39 | 5.3e-99 | 33.33 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Q9ZUW3 | 5.5e-96 | 30.68 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... | [more] |
| Q9SS83 | 1.4e-94 | 28.11 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q9LU94 | 1.8e-94 | 33.44 | Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HSY7 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucurbita ma... | [more] |
| A0A6J1HRM1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g49740 isoform X2 OS=Cucurbita ma... | [more] |
| A0A6J1F3Z9 | 0.0e+00 | 98.80 | pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucurbita mo... | [more] |
| A0A6J1F3R8 | 0.0e+00 | 98.80 | pentatricopeptide repeat-containing protein At3g49740 isoform X2 OS=Cucurbita mo... | [more] |
| A0A1S4DXC2 | 0.0e+00 | 82.27 | pentatricopeptide repeat-containing protein At3g49740 isoform X1 OS=Cucumis melo... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022967731.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita maxi... | [more] |
| XP_022967732.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g49740 isoform X2 [Cucurbita maxi... | [more] |
| XP_022933102.1 | 0.0e+00 | 98.80 | pentatricopeptide repeat-containing protein At3g49740 isoform X1 [Cucurbita mosc... | [more] |
| XP_022933103.1 | 0.0e+00 | 98.80 | pentatricopeptide repeat-containing protein At3g49740 isoform X2 [Cucurbita mosc... | [more] |
| XP_023543368.1 | 0.0e+00 | 98.93 | pentatricopeptide repeat-containing protein At3g49740 [Cucurbita pepo subsp. pep... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G49740.1 | 4.3e-213 | 51.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 3.8e-100 | 33.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G27610.1 | 3.9e-97 | 30.68 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 9.6e-96 | 28.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G25970.1 | 1.3e-95 | 33.44 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
