CmaCh02G015890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G015890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	two-component response regulator-like APRR2
Location	Cma_Chr02: 9032308 .. 9036096 (+)
RNA-Seq Expression	CmaCh02G015890
Synteny	CmaCh02G015890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGAGTTCTTCTCCTTGATCGGGACGGCCATTCCGCAGCCGAGATAACATCAAAACTTGAGGAAATGGAGTATGTTGGTGAGGAATTTTCGAACTCCCCTTTTTTTTCATTTAAGATGTATTTTTGTTAGAAATCCTCGTTCGTTCTTATAAGGCACTGTTGCTTTGCTATCTTCTTCAATATTAAAATATATTTGTATTCTGTTTATATCTCTTTAATGCTAATTACATGTATTGTGGGTGAGTTGGAGTTACGAACCGATCGAAAATGCACTTATTTTTACTTTCTAGGAAGACTTTAGAGTTTCATGGTTTCTTCCGGAAAATGTGTGTTTCCAAATATTAATTTGTTGAAGATCTGAGTTTTTTCTATTATGATGCCATTTCCACGTCTCTCTGTTCCTTTAAGAAGTTTTCTTTCTAGTTTCTTTTCTATGATATAGAGATTTCACTTCTGTGTTGAGAAGTTTCACTTGGCATATTGCAGTCTGTTACTGTAGTGATGAGAAGGAAACTTTGTCAACAATTTTGAACACATCGGAAAACTTCCATGTTGCAATTCTGGAGGTATGGCTAATCACTTTCAGAAAGGAACTATGCATGTACGCCATAAACCTGACTCCTTAAGTTTGCTTGCTTGATAATATCCAGTTCTCGTGATGATTGGACTAATCAGTAGCGATATAACTTTGTTAAATTCTGCTTCAGTTCTCTGATCACTTTTAAATTGTAGCTCCTCAATGTTCTTATAGTAACATTTATCTTTTTAAATTTTTGGATCCATCTCTGATTCAGATGTGCAAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAAGTAAGTTAACAACCAAAACTGGTTTCTTCTCAAAAGAAAAAAGACGGTTTTGAATAGCATATTGTTGGATATTTTTGAAAGCTTCCTCCAACAAACTTTACGGTTCGTGACCTGACTCTGAGATTATGTTGTTCTATGGCACAGTGATTTCAGATGTCTATTGCCTAAGTACCATGATGAAGTGCATTGCAGTAAGAACTCCAATCTAATTTCTCTTTAACCGACCTTTTTGGTAATGCTAAAACTGGACTTTTAGTTCCTTTCAAGGGTTCCTTAGGGACCGGTAACCATGTATGTTTTGCAATAACTGGTATTGGTTTCCACTTTTCTTGTTGGTTTGAGATACCGGTCTCTAAACAAAGCTAGTATCTATAGTTTTTATTTTGTTTCCAGCAGAATTTGATGCTCAGATTATAACTATCTATGGATCTAGATTTACAATTTTTGTTTTGCTTGGTGCAGTTGAGTTTTTGCTGAAACCACTCTCTGAGGACAAATTGAGGAATATCTGGCAGCATGTCCTTCACAAGGTATTTTTCAGTTCTGGAAAACTTCGCATCGCTAAGAAAACATCGAATATAAAGACAAAATATTGACCAGCAATGTTTTGAGAAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATACTGGAGTTCTGGAAGATACGGAAGTTCTTTCTTGGATTCAAGACGTTGTATGGGAGCAAGAGCAACCAGAAGGAAGTGTTATATATCAACTGAACCAGGGATCATCGTTGCAAGGTTGCTGGGAAAGTGAAAATCAAATGAACCGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCGGTCTAACTTCGTCGAAACTGCTTCACATGATTTGGTTTGTGAAGACACCCTTCAGGAGGGCCAACCTCGATTATCTGGCGAGGTAATGCTCGAAGGAGACAGGAACTTTGTTGTTGGCTTAAACGCAGAAAGCGACCTTTATCTTCCCTTGCAGAATAAATCTGGCGTCAAAAGTGGTCCTTCAGCCGCTGAGCACTCAATCCAAGGATCTGATGTAAACCCTTCAGCTAGTTCCAAAGCGAGGAAAACAAAGGTAATTTGATTATCTTATACAAAAACGAAAACTTTTGAGAAGTGCCTTGTATCTGTATTTCTCTAAGGTCATATATCTAGATTATAAAACTCGTTCAAATCTTGGAACGTTATCATGTCTATAAATATATGTTTTCAAATGCGACTTCTATTGTCCATTAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCGGGCAGTCGAACAGTTAGGCATAGATCGTGCAATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGGTTTGCCACCTAGGCTTTTTGTTCCCTTAGATATTAAACTTGTTTCATGCACTTGTTCATATATCCTACAAACTCATGTATCTATAAGTACATTAAACAAGTTTAATGTCTAACATGTTCTTCTAATGCTCTTTATGTCGTTTACGCAGAAGTACAGGATGCAAAGGAAACATGTGATGCAGAGAGAAGAAAATCTAACAAGATATTCAATGCAAACCAATCACTCCCCACCAATCATGGCTTACCCTTCTTATCCTTACTGTGGAATATCCATGTCTACCGTCTATCGAACATGGACGCAGACCAATGGCCATCCAGCTAATGTCAACATGCGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAACTCTTATGCTGGGGTAACGTTTTCCATTCTTAGATTTCAGTGAAATGGCGAGATTCCATCCACAACCATCCAAATTAAAAACCTTGTACGTCACTGCATTAGAAAAATAGTAACATGTTTCTTTGAAAAATTCATTGTTCACGATACGCGTTAGGTACAAAGAAACAAGAAACAGAGTGATTTTTTCGAAAATTCTACTTTTCTTGATTCTCAAAACTCATGTAATTTTTTTTTTTTAAAAAAAAAAAACCAAAATCTTGATGTCACTAACTTGTTGAAGCTACTGGTCCTTGAGAACAAACAAAATGGTAAAATAATTAAAAATTTTGAAAAATGTCGTTTGTGATAATAGTTGTTCAAACTGATTTGTTTCAGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCTCCATATTTTTCATATCCTCAGGTGAAAGTGTATTTTTATTTATTTTTTGCAAGAGTTAAACTGAAATTAACCTTTTTATTTGGTAATTATGGCTGTGTTATTTATTTATTTATTATTATTATTATTTTTTTTTTTTGCCATATTGCAGCAAATTTCAGCATCACACAACGTTTATACAGCAAATAAGGGCTATGGCACGCCTCAAATTTCATTTGATCTTCAACCAGTAAATAAAAAGGCTTCAAAACTTTATTTTAGCATTTGCAAATAATAATAATAATAATAATAATAATTAATTATAGTTTTTTTCCTTTTTGTAGAATGAGGAGTTGATTGACGAGATTGTAAATGAGGCAAAGAGGAAACCATGGTCACCTCTTCCATTGGGGCTTAAACCTCCTTCTGCAGAGATTCTTGTGGAAGAGCTTCCAAAGCAAGGAATCTCCACTCTTACTCCCCAAATCAACGCCTTCAATCCTCCCTGATCCCACTCTCTCCACCTTCTTACTATAAATATGTTTGGGTTAAATTATAAAATAAATTTATGTACTTTCGATTTTTTATTTGAGGTATCATTCAAATTTTTTATTTTTTATTTTTTAAAAAATGAATCTATCCAAACTTTTTAAACGACTCA

mRNA sequence

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGAGTTCTTCTCCTTGATCGGGACGGCCATTCCGCAGCCGAGATAACATCAAAACTTGAGGAAATGGAAGATTTCACTTCTGTGTTGAGAAGTTTCACTTGGCATATTGCAGTCTGTTACTGTAGTGATGAGAAGGAAACTTTGTCAACAATTTTGAACACATCGGAAAACTTCCATGTTGCAATTCTGGAGATGTGCAAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAATTGAGTTTTTGCTGAAACCACTCTCTGAGGACAAATTGAGGAATATCTGGCAGCATGTCCTTCACAAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATACTGGAGTTCTGGAAGATACGGAAGTTCTTTCTTGGATTCAAGACGTTGTATGGGAGCAAGAGCAACCAGAAGGAAGTGTTATATATCAACTGAACCAGGGATCATCGTTGCAAGGTTGCTGGGAAAGTGAAAATCAAATGAACCGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCGGTCTAACTTCGTCGAAACTGCTTCACATGATTTGGTTTGTGAAGACACCCTTCAGGAGGGCCAACCTCGATTATCTGGCGAGGTAATGCTCGAAGGAGACAGGAACTTTGTTGTTGGCTTAAACGCAGAAAGCGACCTTTATCTTCCCTTGCAGAATAAATCTGGCGTCAAAAGTGGTCCTTCAGCCGCTGAGCACTCAATCCAAGGATCTGATGTAAACCCTTCAGCTAGTTCCAAAGCGAGGAAAACAAAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCGGGCAGTCGAACAGTTAGGCATAGATCGTGCAATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGACCAATGGCCATCCAGCTAATGTCAACATGCGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAACTCTTATGCTGGGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCTCCATATTTTTCATATCCTCAGCAAATTTCAGCATCACACAACGTTTATACAGCAAATAAGGGCTATGGCACGCCTCAAATTTCATTTGATCTTCAACCAAATGAGGAGTTGATTGACGAGATTGTAAATGAGGCAAAGAGGAAACCATGGTCACCTCTTCCATTGGGGCTTAAACCTCCTTCTGCAGAGATTCTTGTGGAAGAGCTTCCAAAGCAAGGAATCTCCACTCTTACTCCCCAAATCAACGCCTTCAATCCTCCCTGATCCCACTCTCTCCACCTTCTTACTATAAATATGTTTGGGTTAAATTATAAAATAAATTTATGTACTTTCGATTTTTTATTTGAGGTATCATTCAAATTTTTTATTTTTTATTTTTTAAAAAATGAATCTATCCAAACTTTTTAAACGACTCA

Coding sequence (CDS)

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGAGTTCTTCTCCTTGATCGGGACGGCCATTCCGCAGCCGAGATAACATCAAAACTTGAGGAAATGGAAGATTTCACTTCTGTGTTGAGAAGTTTCACTTGGCATATTGCAGTCTGTTACTGTAGTGATGAGAAGGAAACTTTGTCAACAATTTTGAACACATCGGAAAACTTCCATGTTGCAATTCTGGAGATGTGCAAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAATTGAGTTTTTGCTGAAACCACTCTCTGAGGACAAATTGAGGAATATCTGGCAGCATGTCCTTCACAAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATACTGGAGTTCTGGAAGATACGGAAGTTCTTTCTTGGATTCAAGACGTTGTATGGGAGCAAGAGCAACCAGAAGGAAGTGTTATATATCAACTGAACCAGGGATCATCGTTGCAAGGTTGCTGGGAAAGTGAAAATCAAATGAACCGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCGGTCTAACTTCGTCGAAACTGCTTCACATGATTTGGTTTGTGAAGACACCCTTCAGGAGGGCCAACCTCGATTATCTGGCGAGGTAATGCTCGAAGGAGACAGGAACTTTGTTGTTGGCTTAAACGCAGAAAGCGACCTTTATCTTCCCTTGCAGAATAAATCTGGCGTCAAAAGTGGTCCTTCAGCCGCTGAGCACTCAATCCAAGGATCTGATGTAAACCCTTCAGCTAGTTCCAAAGCGAGGAAAACAAAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCGGGCAGTCGAACAGTTAGGCATAGATCGTGCAATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGACCAATGGCCATCCAGCTAATGTCAACATGCGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAACTCTTATGCTGGGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCTCCATATTTTTCATATCCTCAGCAAATTTCAGCATCACACAACGTTTATACAGCAAATAAGGGCTATGGCACGCCTCAAATTTCATTTGATCTTCAACCAAATGAGGAGTTGATTGACGAGATTGTAAATGAGGCAAAGAGGAAACCATGGTCACCTCTTCCATTGGGGCTTAAACCTCCTTCTGCAGAGATTCTTGTGGAAGAGCTTCCAAAGCAAGGAATCTCCACTCTTACTCCCCAAATCAACGCCTTCAATCCTCCCTGA

Protein sequence

MVCTADDLQEWKDFPKGLRVLLLDRDGHSAAEITSKLEEMEDFTSVLRSFTWHIAVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKDLPIIIEFLLKPLSEDKLRNIWQHVLHKAFSSTPKPEVDSAASLMQLQLESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSLQGCWESENQMNRPMETDCSDKDVRSNFVETASHDLVCEDTLQEGQPRLSGEVMLEGDRNFVVGLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQTNGHPANVNMRGPPDYRHWPQPGTQPWNSYAGMQADAWGCPVMLPSRAPYFSYPQQISASHNVYTANKGYGTPQISFDLQPNEELIDEIVNEAKRKPWSPLPLGLKPPSAEILVEELPKQGISTLTPQINAFNPP

Homology

[Close]

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot
Match: Q6LA43 (Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=APRR2 PE=2 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-63
Identity = 200/573 (34.90%), Postives = 276/573 (48.17%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRH-------- 420
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R         
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 420

Query: 421 ------------------------------------WPQP-----GTQPWN---SYAGMQ 471
                                               WP P        PW+    Y  + 
Sbjct: 421 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVS 480

[Close]

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot
Match: Q9FFH0 (Transcription activator GLK2 OS=Arabidopsis thaliana OX=3702 GN=GLK2 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-27
Identity = 86/243 (35.39%), Postives = 117/243 (48.15%), Query Frame = 0


Query: 295 RKTKVDWSPELHRKFIRAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-------- 354
           +K KVDW+PELHRKF++AVEQLG+D+A+PS+ILE+M V+ LTRHNVASHLQ         
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205

Query: 355 ----------------------------------------------NGHPANVNMRGPPD 414
                                                         +GH   +++ G P 
Sbjct: 206 LAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLHVWGHPT 265

Query: 415 Y-RHWPQPGTQPWNSYAGMQADAWGCPVMLPSRAPYFS----YPQ---QISASHN---VY 473
           + +H P        +Y  M A A   P   P   PY+     YPQ     S++H+   V 
Sbjct: 266 WPKHKPNTPASAHRTYP-MPAIA-AAPASWPGHPPYWHQQPLYPQGYGMASSNHSSIGVP 325

[Close]

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot
Match: Q5Z5I4 (Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLK1 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-25
Identity = 90/302 (29.80%), Postives = 127/302 (42.05%), Query Frame = 0


Query: 272 SGPSAAEHSIQGSDVNPSASSKA----RKTKVDWSPELHRKFIRAVEQLGIDRAIPSKIL 331
           S PS+   S Q ++    +SSK+    +K KVDW+PELHR+F++AVEQLGID+A+PS+IL
Sbjct: 152 SSPSSTTSSSQEAESRHKSSSKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRIL 211

Query: 332 ELMKVEGLTRHNVASHLQT-NGHPANVNMRGP----------------------PDYRHW 391
           E+M ++ LTRHN+ASHLQ    H  ++  R                        P+   W
Sbjct: 212 EIMGIDSLTRHNIASHLQKYRSHRKHMIAREAEAASWTQRRQIYAAGGGAVAKRPESNAW 271

Query: 392 ------------PQPGTQPWNSYAGMQADAWGCPVMLPSRAPYF---------------- 451
                       P P   P   +A      WG P M PSR P +                
Sbjct: 272 TVPTIGFPPPPPPPPSPAPIQHFA-RPLHVWGHPTMDPSRVPVWPPRHLVPRGPAPPWVP 331

Query: 452 -SYPQQISASHNVYTANKGY----GTP--------------------------------- 473
              P   +  H+ Y     +    GTP                                 
Sbjct: 332 PPPPSDPAFWHHPYMRGPAHVPTQGTPCMAMPMPAARFPAPPVPGVVPCPMYRPLTPPAL 391

[Close]

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot
Match: Q9SIV3 (Transcription activator GLK1 OS=Arabidopsis thaliana OX=3702 GN=GLK1 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-25
Identity = 80/264 (30.30%), Postives = 110/264 (41.67%), Query Frame = 0


Query: 295 RKTKVDWSPELHRKFIRAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQ--------- 354
           RK KVDW+PELHR+F+ AVEQLG+D+A+PS+ILELM V  LTRHNVASHLQ         
Sbjct: 152 RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 211

Query: 355 ------------------------TNGH----------------PANVNMRGPPDYRH-- 414
                                    NG                 P  V +  PP + H  
Sbjct: 212 LAREAEAANWTRKRHIYGVDTGANLNGRTKNGWLAPAPTLGFPPPPPVAVAPPPVHHHHF 271

Query: 415 -----WPQPGTQP------WNSYAGMQADAWGCPVMLPSRAPYF---------------- 473
                W  P          W  +    + A   P    S +PY+                
Sbjct: 272 RPLHVWGHPTVDQSIMPHVWPKHLPPPSTAMPNPPFWVSDSPYWHPMHNGTTPYLPTVAT 331

[Close]

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-17
Identity = 108/456 (23.68%), Postives = 164/456 (35.96%), Query Frame = 0


Query: 13  DFPKGLRVLLLDRDGHSAAEITSKLEEME-DFTSVLRSFTWHIAVCYCSDEKETLSTILN 72
           +FP G++VL++D D    A +   L E   D T+             CS     L+ +  
Sbjct: 11  EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATT-------------CSQATRALTMLRE 70

Query: 73  TSENFHVAILEMCKGNYD--ESFKLLGSSKDLPIII-------------------EFLLK 132
               F V I ++   + D     +L+G   DLP+I+                   ++L+K
Sbjct: 71  NRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIK 130

Query: 133 PLSEDKLRNIWQHVLHKAFSSTPKPEVDSAASLMQLQLESEDNTGVLEDTEVLSWIQDVV 192
           P+  ++L+NIWQHV+ K F+                  +  +++G L+DT+         
Sbjct: 131 PVRMEELKNIWQHVIRKKFNEN----------------KEHEHSGSLDDTD--------- 190

Query: 193 WEQEQPEGSVIYQLNQGSSLQGCWESENQMNRPMETDCSDKDVRSNFVETASHDLVCEDT 252
                      Y  +     +G W+S+ +     + D  D D                  
Sbjct: 191 -RTRPTNNDNEYASSANDGAEGSWKSQKK-----KRDKDDDD----------------GE 250

Query: 253 LQEGQPRLSGEVMLEGDRNFVVGLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSA 312
           L+ G P                                                      
Sbjct: 251 LESGDP------------------------------------------------------ 310

Query: 313 SSKARKTKVDWSPELHRKFIRAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQ----- 372
           SS ++K +V WS ELH++F+ AV  LGID+A+P KILELM V GLTR NVASHLQ     
Sbjct: 311 SSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLY 345

Query: 373 ----TNGHPANVNMRGPP------------DYRHWPQPGTQPWNSYAGMQADAWGCP--- 423
                  H    N   PP            D++     G  P  + A +Q +  G P   
Sbjct: 371 LKRIAQHHAGIANPFCPPASSGKVGSLGGLDFQALAASGQIPPQALAALQDELLGRPTNS 345

[Close]

BLAST of CmaCh02G015890 vs. TAIR 10
Match: AT4G18020.1 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 245.4 bits (625), Expect = 9.6e-65
Identity = 200/573 (34.90%), Postives = 276/573 (48.17%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRH-------- 420
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R         
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 420

Query: 421 ------------------------------------WPQP-----GTQPWN---SYAGMQ 471
                                               WP P        PW+    Y  + 
Sbjct: 421 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVS 480

[Close]

BLAST of CmaCh02G015890 vs. TAIR 10
Match: AT4G18020.2 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 245.4 bits (625), Expect = 9.6e-65
Identity = 200/573 (34.90%), Postives = 276/573 (48.17%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRH-------- 420
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R         
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 420

Query: 421 ------------------------------------WPQP-----GTQPWN---SYAGMQ 471
                                               WP P        PW+    Y  + 
Sbjct: 421 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVS 480

[Close]

BLAST of CmaCh02G015890 vs. TAIR 10
Match: AT4G18020.3 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 245.4 bits (625), Expect = 9.6e-65
Identity = 200/573 (34.90%), Postives = 276/573 (48.17%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRH-------- 420
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R         
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 420

Query: 421 ------------------------------------WPQP-----GTQPWN---SYAGMQ 471
                                               WP P        PW+    Y  + 
Sbjct: 421 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVS 480

[Close]

BLAST of CmaCh02G015890 vs. TAIR 10
Match: AT4G18020.6 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 245.4 bits (625), Expect = 9.6e-65
Identity = 200/573 (34.90%), Postives = 276/573 (48.17%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRH-------- 420
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R         
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 420

Query: 421 ------------------------------------WPQP-----GTQPWN---SYAGMQ 471
                                               WP P        PW+    Y  + 
Sbjct: 421 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVS 480

[Close]

BLAST of CmaCh02G015890 vs. TAIR 10
Match: AT4G18020.4 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 192.6 bits (488), Expect = 7.4e-49
Identity = 161/453 (35.54%), Postives = 226/453 (49.89%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDGHSAAEITSKLEEMEDFTSVLRSFTWHI 60
           MV TA+DL +W++FPKGL+VLLL      D DG SAAE  S+LE M+    ++ +FT   
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMD---YIVTTFT--- 60

Query: 61  AVCYCSDEKETLSTILNTSENFHVAILEMCKGNYDESFKLLGSSKD-LPII--------- 120
                 DE E LS ++   E+FH+AI+E+      ESFK L ++KD LP I         
Sbjct: 61  ------DETEALSAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCIT 120

Query: 121 ----------IEFLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQ 180
                     +EFL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+
Sbjct: 121 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE 180

Query: 181 LESEDNTGVLEDTEVLSWIQDVVWEQEQPEGSVIYQLNQGSSL--QGCWESEN----QMN 240
                               D+  E++ P  S   QL Q S L    C E+ N     +N
Sbjct: 181 -------------------TDMTIEEKDPAPST-PQLKQDSRLLDGDCQENINFSMENVN 240

Query: 241 RPMETDCSD--KDV-RSNFVETASHDL-----VCEDTLQEGQPRLSGEV-MLEGDRNFVV 300
              E D  +  +D+  S  V+T +  L     V ++   + +    GE   L  ++   V
Sbjct: 241 SSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 300

Query: 301 GLNAESDLYLPLQNKSGVKSGPSAAEHSIQGSDVNPSASSKARKTKVDWSPELHRKFIRA 360
            ++ + D   P+   SG+K               N S +  +RK KVDW+PELH+KF++A
Sbjct: 301 DIHKKEDETKPINKSSGIK---------------NVSGNKTSRK-KVDWTPELHKKFVQA 360

Query: 361 VEQLGIDRAIPSKILELMKVEGLTRHNVASHLQT-NGHPANVNMRGPPDYRHWPQ----- 394
           VEQLG+D+AIPS+ILELMKV  LTRHNVASHLQ    H  N+  +   ++R W Q     
Sbjct: 361 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHR-WIQSRENH 404

The following BLAST results are available for this feature:

BLAST of CmaCh02G015890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6LA43	1.4e-63	34.90	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9FFH0	3.5e-27	35.39	Transcription activator GLK2 OS=Arabidopsis thaliana OX=3702 GN=GLK2 PE=1 SV=1	[more]
Q5Z5I4	1.1e-25	29.80	Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica OX=39947 GN=G...	[more]
Q9SIV3	2.5e-25	30.30	Transcription activator GLK1 OS=Arabidopsis thaliana OX=3702 GN=GLK1 PE=1 SV=2	[more]
A2XE31	1.5e-17	23.68	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of CmaCh02G015890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18020.1	9.6e-65	34.90	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.2	9.6e-65	34.90	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.3	9.6e-65	34.90	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.6	9.6e-65	34.90	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.4	7.4e-49	35.54	CheY-like two-component responsive regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 292..349 e-value: 7.2E-23 score: 82.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..298
None	No IPR available	PANTHER	PTHR31312:SF4	TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2	coord: 1..345 coord: 346..476
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 299..346 e-value: 5.6E-7 score: 29.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 293..352 score: 13.278122
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 296..345 e-value: 2.2E-21 score: 73.9
IPR044825	Transcription activator GLK1/2-like	PANTHER	PTHR31312	TRANSCRIPTION ACTIVATOR GLK1	coord: 1..345 coord: 346..476
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 295..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G015890.1	CmaCh02G015890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016301	kinase activity