CmaCh02G015420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G015420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	vesicle-associated protein 1-2-like
Location	Cma_Chr02: 8757487 .. 8761017 (+)
RNA-Seq Expression	CmaCh02G015420
Synteny	CmaCh02G015420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGTGTTTTCCTCCACCCTCTCTTGTTCGCAACACGTTCGCCATTGTTGCCCCTCTCTTTTCTCGATCTGTTCGAAACTTGCTCTCAAGCAACAAGCTCATTTTCCAGATTCTTTTTTCTTTCTATAACCTCTTCAATTTCGTCTTTTTCCCCTTTTGTTTGTTCTTCACTCTTCCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTGTCTGTGAGTAGTTGTTGATTCTAGAGGGACTGATTTTCTTCTTGCGGATCTGTAATATTTTGAGGGATCTTTTTTGTTTTTTTGTTTTCGTTTCTTTGGTGCTTAATTTGTTTCTGTTTGTCTGTTTTTGGTCAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTCTGTGTTTCGTTTCTCTCTATTTGAATCTTTTTGGGTTTTGATTCTATTTTTGTGATTTGTGTAATTGATCTTTTTTCGAGTGAAATGGTTTGGTGCTTGTAGTATGGAAGTGTTTTGGATTTTGAATTTAGGCGTGTGCACTTTTTTGTTGTTGTTGTTGTTTCTTTTGCTTTTTTTTCTTGATGTATCTGTCTGGTGCCAGATCACGCCCTGAAACTAGTTAATTTCGTCATTTTTCAATTTGCTTGCGGGTGTTTTGGTGTTTATAATTCATTTTTTATTGGCAAATTGAGCGAAGATTAAAGCTCGTATGATTACTTTGTCGACTTAGTATGAAGTTTATCTCTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCCAACACTGGAGTTGTCTCGCCAGGGTCAACATGCGATGTTATAGGTGCCAAATGCCAATATCAAATATTTTCCTTCTTTGATTTTAGTTTTCAGATGAGTTTTGTGGTTATTGAAATGGGTAGTACTTTGTTTTGTAGTCACCATGCAAGCCCAGAAAGAAGCTCCTGCTGATATGCAATGCAAAGACAAGTTCCTCCTTCAGAGTGTTAAAACCTTCGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGGTATTTATACTGTGAATGTTCGAAGTTTGTAGTTAATTTTAGCACCTTACTTTTGTTTATGGGCGTGGGGTTTGCAGTTCAACAAGGAGGCTGGGCATGTGGTTGAGGAATGCAAATTGAAAGTCGTTTATTCTCCTCCAGCTCAGCCACCATCTCCAGTACCAGAAGGTTCTGAAGAAGGATCCTCTCCAAGAGGTTCCATTTCAGAGAATGGAAACTTCAATGATACCGAATTAAACACTGTGAGTAGTCGAGTGTTGGGTTTTCTTTTCCCTTTTCTTTCATCTGCGCATTTAATTTATACATCTTCACCTTCTGTTTGCAGGCTACAAGGGGATATGTTGATCGGTCGGAGCCCCAGGATAAATCTGCAGAGGTAAAAAAGGGTGATTATTGGCTTGTAATAGGCTTAAAGCTTATGTCTGCAGTTTACTGTGATTCTCTCTTTTGTTTTCTGCAACTCTGTGGATGTGTTCAAAAAAATTTCTTCCAAACTGCCACCTCTATTTTAAAATTTTTATAAGATAGAACTCAATGCTAAATTATGCCCTTGTGATTTGAGTGTTACTCTGAGTAGTAACAATATAATTTGCTTTGGGCAGTATAATAATTGATAATACACTCCGTGAAGTTTTGGGTGAGCTTGTTGTTTCCTGTTCTTGTTCTTGGGGCTGTTCACTTTCATTTGGTCTATATTTTAAGCATCTTTTTTGTATTTTTAACCTTTACTGAATGCATTGAAATGCACAATTGGAGTTCTTAGTGTTAACCACTTAACATACACATGGATGTAACTTCCTTGGCATAATATGCGAATGGTTGAGGATTTACTTTCAGAATTTTGTTTAAGACTGCTGAGCACATGTTTTGTATAGATTGTTTTTATAATGGTTAGGTTTCTTATGTGATCTTTGATCATTTTCCTTAACTTTAGTGGAAACCACTTGATAACATGATAGAAGTATTTTCATCACAAAATAATAAATTTAGAGAAGTACTGCTATAGTTAATCTCCGAAAGAACATACACTGTGGAGTAGATATAATCTCTTGTCCCCAAGTATTGCAATACTATCCCACCATGAGTTGACGGTTGGCTTGGCAGGGAAGCGTTTAACTGTAAACTTGGATATCTTTGAGGTCGTAAATTCAAGCCATGAGTGTCACCTACCTTGGGTATTAAATATTTTACCTTTTTTCCAGTGCCAAATAAAGAGTTGTGGTAGGATACATCCACTTGGAGAGAACCTCCCTAAACTGTTAGACTTCAACAATCCCTTAAATATATATATACACGCACGCACACGCACACACAAGGATGATGCTATATTCTTGTCTTGTTAATGTGCATTAAACTCTTATAGGTGTCTGCCAATATATTAGGCTTAAGATATTGGAGTTAATATGAGAATCTCTATCCCTTTTGCTTCGGAACTCTTTGTCAAAATCTAAAAAGTACCATTATTCATAGGTCCAACCACCTTTGGATCCCCTGTTCTCTCTTTTTTTTTAACCCTTCTGTTTGTGCAATGTTCTCAAACCTTTATCGTGGTTCTCTGTGATTTTTAAACCATTCAGCACCGCACAGATGGTTTGATTGACTAAATCATGGCCACTGGAGCTATTTGTGTACATGTGTTTGTGTTTTTCGTTTCTGCGTATGCTGTACTCTCAGCTTGTAGCAGTCTGCTTATTGGCTACTTTAACATGTGCAGGCTAGAGCCCTCATAGCTAAACTTACAGAGGAAAAGAATAGTGCCCTCCAACAGAATAATAAACTTCGTCAGGAATTGGTAAGAGGGGTTTTATTACATGGGAAACATTGTCTTCACCATTGTGTTATACTTGAATAAATCTCCAAGTCTCTTTACCTGAATACCTTTTTGAAGAATTACCCAAATAGAATATTTACTATTCTGAACTTTGTTTGTAAGGTTGCAAATCAGGCTATGCTCAAATCTGATTCTTTTCTTGGAATACATTAGTTTCTGATGTGTTGGAGGTTTGAATTGTGCAGGAACTTTTGAAGCGCGATGGCAGGAAAAATGGCGGTGGTGTCTCCTTCCTGCTTGTCATATTAATTGGATTGATCGGAATCATGTTGGGCTATATTATTAAGAAGACTTGACAAACTCATGGCAGCAAAACTGGATTTATATCATTATATATTCTATGATGAAAGGAAGGGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCGAGTTTTAATTTGTTGGAAGTAGCAAATTGTTAGATGGTGTTCAAGGATTTGTAGTTACTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTCTTTTTTTCCCTATTTTTTTTTTCTCTATTTTTTCTTCTCTGCTTCTCTTATCAACCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCTCAATTGTTCAGCCATTT

mRNA sequence

CACGTGTTTTCCTCCACCCTCTCTTGTTCGCAACACGTTCGCCATTGTTGCCCCTCTCTTTTCTCGATCTGTTCGAAACTTGCTCTCAAGCAACAAGCTCATTTTCCAGATTCTTTTTTCTTTCTATAACCTCTTCAATTTCGTCTTTTTCCCCTTTTGTTTGTTCTTCACTCTTCCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTGTCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCCAACACTGGAGTTGTCTCGCCAGGGTCAACATGCGATGTTATAGTCACCATGCAAGCCCAGAAAGAAGCTCCTGCTGATATGCAATGCAAAGACAAGTTCCTCCTTCAGAGTGTTAAAACCTTCGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGTTCAACAAGGAGGCTGGGCATGTGGTTGAGGAATGCAAATTGAAAGTCGTTTATTCTCCTCCAGCTCAGCCACCATCTCCAGTACCAGAAGGTTCTGAAGAAGGATCCTCTCCAAGAGGTTCCATTTCAGAGAATGGAAACTTCAATGATACCGAATTAAACACTGCTACAAGGGGATATGTTGATCGGTCGGAGCCCCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCTAAACTTACAGAGGAAAAGAATAGTGCCCTCCAACAGAATAATAAACTTCGTCAGGAATTGGAACTTTTGAAGCGCGATGGCAGGAAAAATGGCGGTGGTGTCTCCTTCCTGCTTGTCATATTAATTGGATTGATCGGAATCATGTTGGGCTATATTATTAAGAAGACTTGACAAACTCATGGCAGCAAAACTGGATTTATATCATTATATATTCTATGATGAAAGGAAGGGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCGAGTTTTAATTTGTTGGAAGTAGCAAATTGTTAGATGGTGTTCAAGGATTTGTAGTTACTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTCTTTTTTTCCCTATTTTTTTTTTCTCTATTTTTTCTTCTCTGCTTCTCTTATCAACCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCTCAATTGTTCAGCCATTT

Coding sequence (CDS)

ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTGTCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCCAACACTGGAGTTGTCTCGCCAGGGTCAACATGCGATGTTATAGTCACCATGCAAGCCCAGAAAGAAGCTCCTGCTGATATGCAATGCAAAGACAAGTTCCTCCTTCAGAGTGTTAAAACCTTCGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGTTCAACAAGGAGGCTGGGCATGTGGTTGAGGAATGCAAATTGAAAGTCGTTTATTCTCCTCCAGCTCAGCCACCATCTCCAGTACCAGAAGGTTCTGAAGAAGGATCCTCTCCAAGAGGTTCCATTTCAGAGAATGGAAACTTCAATGATACCGAATTAAACACTGCTACAAGGGGATATGTTGATCGGTCGGAGCCCCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCTAAACTTACAGAGGAAAAGAATAGTGCCCTCCAACAGAATAATAAACTTCGTCAGGAATTGGAACTTTTGAAGCGCGATGGCAGGAAAAATGGCGGTGGTGTCTCCTTCCTGCTTGTCATATTAATTGGATTGATCGGAATCATGTTGGGCTATATTATTAAGAAGACTTGA

Protein sequence

MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVSPGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECKLKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAEARALIAKLTEEKNSALQQNNKLRQELELLKRDGRKNGGGVSFLLVILIGLIGIMLGYIIKKT

Homology

[Close]

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.0e-80
Identity = 159/240 (66.25%), Postives = 195/240 (81.25%), Query Frame = 0


Query: 3   TGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVSPG 62
           + ELL+I+P++L+F FELKKQISCSL L NKT++YVAFKVKTTNPKKYCVRPNTGVV P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  STCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECKLK 122
           S+ +V+VTMQAQKEAPAD+QCKDKFLLQ V    GAT KD+  EMF+KEAGH VEE KL+
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121

Query: 123 VVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAEARA 182
           VVY  P +PPSPV EGSEEGSSPR S+S+NGN +D     A R   DR + QD S+EARA
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASD--FTAAPRFSADRVDAQDNSSEARA 181

Query: 183 LIAKLTEEKNSALQQNNKLRQELELLKRDG-RKNGGGVSFLLVILIGLIGIMLGYIIKKT 242
           L+ KLTEEKNSA+Q NN+L+QEL+ L+R+  R   GG+ F+ V+L+GLIG++LGYI+K+T
Sbjct: 182 LVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-77
Identity = 155/243 (63.79%), Postives = 197/243 (81.07%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVS 60
           MS  ELL++EPL+L+F FELKKQISCSL L+NKT++ VAFKVKTTNPKKYCVRPNTGVV 
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECK 120
           P STC+V+VTMQAQKEAP+DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 LKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVD-RSEPQDKSAE 180
           L+V Y  P +PPSPV EGSEEGSSPR S+S+NG+ ++       R  VD ++  Q+ ++E
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFE---RFIVDNKAGHQENTSE 196

Query: 181 ARALIAKLTEEKNSALQQNNKLRQELELLKRDGRKN-GGGVSFLLVILIGLIGIMLGYII 240
           ARALI KLTEEK SA+Q NN+L++EL+ L+R+ +K+  GG+ F+ V+L+GLIG++LGYI+
Sbjct: 197 ARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIM 256

Query: 241 KKT 242
           K+T
Sbjct: 257 KRT 256

[Close]

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-70
Identity = 144/242 (59.50%), Postives = 192/242 (79.34%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESY-VAFKVKTTNPKKYCVRPNTGVV 60
           M+TG+L++I P ELKF FELKKQ SCS+QL+NKT +  VAFKVKTTNP+KYCVRPNTGVV
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  SPGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEEC 120
            PG +C+V VTMQAQKEAP DMQCKDKFL+Q+V   DG T+K++ AEMFNKEAG V+E+ 
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120

Query: 121 KLKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAE 180
           KL+VVY  PA PPSPVPEGSEEG+SP  S+++  + + +  +  +R + + SE   KS+E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSE 180

Query: 181 ARALIAKLTEEKNSALQQNNKLRQELELLKRD-GRKNGGGVSFLLVILIGLIGIMLGYII 240
           A ++I+KLTEEK SA QQ+ KLR ELE+L+++  +K  GG S LL++L+GL+G ++GY++
Sbjct: 181 AWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLL 238

[Close]

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 97/153 (63.40%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 5   ELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVSPGST 64
           ELL I+P++++F  EL K++SCSL L+NKTE+YVAFK KTTN KKY VRPN GVV P S+
Sbjct: 175 ELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS 234

Query: 65  CDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECKLKVV 124
           C+V+V MQA KEAPADMQC+DK L Q        TAKD+ +EMF+KEAGH  EE +LKV+
Sbjct: 235 CEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVM 294

Query: 125 YSPPAQPPSPVPEGSEEGSSPRGSISENGNFND 158
           Y  P QPPSPV EG+EEGSSPR S+S+NGN ++
Sbjct: 295 YVTPPQPPSPVQEGTEEGSSPRASVSDNGNASE 327

[Close]

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-42
Identity = 104/239 (43.51%), Postives = 148/239 (61.92%), Query Frame = 0


Query: 5   ELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVSPGST 64
           +L+SI+P ELKF+FEL+KQ  C L+++NKTE+YVAFKVKTT+PKKY VRPNTGV+ P  +
Sbjct: 8   QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 65  CDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECKLKVV 124
           C + VT+QAQ+E P DMQCKDKFLLQS          ++  + F K++G  + ECKLKV 
Sbjct: 68  CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVS 127

Query: 125 YSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAEARALI 184
           Y      PS     SE G                    AT G         +S+E  + I
Sbjct: 128 YI----TPSTTQRSSESG--------------------ATNG-------DGQSSETISTI 187

Query: 185 AKLTEEKNSALQQNNKLRQELELL--KRDGRKNGGGVSFLLVILIGLIGIMLGYIIKKT 242
            +L EE+++A++Q  +L+ ELE +  +R+ R +G G+S  L  ++GLIG+++G+I+K T
Sbjct: 188 QRLKEERDAAVKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLT 215

[Close]

BLAST of CmaCh02G015420 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 301.2 bits (770), Expect = 7.4e-82
Identity = 159/240 (66.25%), Postives = 195/240 (81.25%), Query Frame = 0


Query: 3   TGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVSPG 62
           + ELL+I+P++L+F FELKKQISCSL L NKT++YVAFKVKTTNPKKYCVRPNTGVV P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  STCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECKLK 122
           S+ +V+VTMQAQKEAPAD+QCKDKFLLQ V    GAT KD+  EMF+KEAGH VEE KL+
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121

Query: 123 VVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAEARA 182
           VVY  P +PPSPV EGSEEGSSPR S+S+NGN +D     A R   DR + QD S+EARA
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASD--FTAAPRFSADRVDAQDNSSEARA 181

Query: 183 LIAKLTEEKNSALQQNNKLRQELELLKRDG-RKNGGGVSFLLVILIGLIGIMLGYIIKKT 242
           L+ KLTEEKNSA+Q NN+L+QEL+ L+R+  R   GG+ F+ V+L+GLIG++LGYI+K+T
Sbjct: 182 LVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of CmaCh02G015420 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-78
Identity = 155/243 (63.79%), Postives = 197/243 (81.07%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVS 60
           MS  ELL++EPL+L+F FELKKQISCSL L+NKT++ VAFKVKTTNPKKYCVRPNTGVV 
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECK 120
           P STC+V+VTMQAQKEAP+DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 LKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVD-RSEPQDKSAE 180
           L+V Y  P +PPSPV EGSEEGSSPR S+S+NG+ ++       R  VD ++  Q+ ++E
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFE---RFIVDNKAGHQENTSE 196

Query: 181 ARALIAKLTEEKNSALQQNNKLRQELELLKRDGRKN-GGGVSFLLVILIGLIGIMLGYII 240
           ARALI KLTEEK SA+Q NN+L++EL+ L+R+ +K+  GG+ F+ V+L+GLIG++LGYI+
Sbjct: 197 ARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIM 256

Query: 241 KKT 242
           K+T
Sbjct: 257 KRT 256

[Close]

BLAST of CmaCh02G015420 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-71
Identity = 144/242 (59.50%), Postives = 192/242 (79.34%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESY-VAFKVKTTNPKKYCVRPNTGVV 60
           M+TG+L++I P ELKF FELKKQ SCS+QL+NKT +  VAFKVKTTNP+KYCVRPNTGVV
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  SPGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEEC 120
            PG +C+V VTMQAQKEAP DMQCKDKFL+Q+V   DG T+K++ AEMFNKEAG V+E+ 
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120

Query: 121 KLKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGNFNDTELNTATRGYVDRSEPQDKSAE 180
           KL+VVY  PA PPSPVPEGSEEG+SP  S+++  + + +  +  +R + + SE   KS+E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSE 180

Query: 181 ARALIAKLTEEKNSALQQNNKLRQELELLKRD-GRKNGGGVSFLLVILIGLIGIMLGYII 240
           A ++I+KLTEEK SA QQ+ KLR ELE+L+++  +K  GG S LL++L+GL+G ++GY++
Sbjct: 181 AWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLL 238

[Close]

BLAST of CmaCh02G015420 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.9e-59
Identity = 113/154 (73.38%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVS 60
           MS  ELL++EPL+L+F FELKKQISCSL L+NKT++ VAFKVKTTNPKKYCVRPNTGVV 
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECK 120
           P STC+V+VTMQAQKEAP+DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 LKVVYSPPAQPPSPVPEGSEEGSSPRGSISENGN 155
           L+V Y  P +PPSPV EGSEEGSSPR S+S+NG+
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH 170

[Close]

BLAST of CmaCh02G015420 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein )

HSP 1 Score: 224.9 bits (572), Expect = 6.7e-59
Identity = 118/175 (67.43%), Postives = 138/175 (78.86%), Query Frame = 0


Query: 1   MSTGELLSIEPLELKFVFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGVVS 60
           MS  ELL++EPL+L+F FELKKQISCSL L+NKT++ VAFKVKTTNPKKYCVRPNTGVV 
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PGSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTFDGATAKDINAEMFNKEAGHVVEECK 120
           P STC+V+VTMQAQKEAP+DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 LKVVYSPPAQPPSPVPEGSEEGSSPRGSISENG----------NFNDTELNTATR 166
           L+V Y  P +PPSPV EGSEEGSSPR S+S+NG          NF+  +L+  TR
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSIFMFNFSLRDLSWTTR 191

The following BLAST results are available for this feature:

BLAST of CmaCh02G015420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHC8	1.0e-80	66.25	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	2.4e-77	63.79	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q84WW5	2.8e-70	59.50	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SYC9	3.1e-48	63.40	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]
Q9LVU1	2.5e-42	43.51	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]

BLAST of CmaCh02G015420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45140.1	7.4e-82	66.25	plant VAP homolog 12	[more]
AT3G60600.1	1.7e-78	63.79	vesicle associated protein	[more]
AT4G00170.1	2.0e-71	59.50	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT3G60600.2	3.9e-59	73.38	vesicle associated protein	[more]
AT3G60600.3	6.7e-59	67.43	vesicle associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 177..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..160
None	No IPR available	PANTHER	PTHR10809:SF130	VESICLE-ASSOCIATED PROTEIN 1-2-LIKE	coord: 1..239
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 2..130 e-value: 1.1E-45 score: 156.7
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 7..110 e-value: 9.2E-31 score: 105.9
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 6..126 score: 30.143114
IPR016763	Vesicle-associated membrane-protein-associated protein	PIRSF	PIRSF019693	VAMP_assoc_prot	coord: 1..240 e-value: 9.2E-67 score: 223.9
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..239
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 2..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G015420.1	CmaCh02G015420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane