CmaCh02G014970 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G014970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein of unknown function (DUF1191)
Location	Cma_Chr02: 8553111 .. 8554046 (-)
RNA-Seq Expression	CmaCh02G014970
Synteny	CmaCh02G014970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTCTTCTTCTTTTTCTTCTTCTTCTCGTCGGCCTCATCAATGGCCTTCCTCAAAGCTCAGCCCCACAAACTCCAATCAACCCATCTTCTCGATCTCTACATCAGAGATTACACATTCAAGTCCCTCGACAACACAATCAAAACAGGGACACTTCACAACGTCCCACTGCCCCAAAATTTCTCCGGCGTCAACGTCGACACGGCCAGGTTCCGATGCGGAAGTTTACGGCGGTACGGCGCCAGGGTGAAGGAATTCCATCTGGGTGTCGGCGTTTCTTTGAACCCATGTGCGGAGAGAATCGTAATCATCCGACAAAATTTGGGCTCCAATTGGTCCTCCATTTACTTCAACAGCTACCATTTAACTGGTTACCAATTAGTGTCTTCAATTTTGGGGCTTTTGGCTTATAATTCCGGCTACTACAGTAATAGTTCCAGTTCCGCTGTTCCATTTGAGGTTGGAATATCTGCCGGAGAAAAACCCATCACGATAGACTTCAGAAACTCGACGAGAATGGAGAATGTTTCGGGAATGAGGCCAATTTGTGCGAGCTTTGAGAGGGATGGGAGAGTGACTTTGGCAAAGGAAATTTCGCCATTGATATGCTCTGTTTTGAGACAGGGCCATTTTGGGTTGGTAGTGGAGGAGCCAGAGCCGGTGGAGCTGAGGAAAAAGGAGCGGCCGTGGAAGGTAGCGATCGGGAGCTCGATTGGGGCGGCGATCGGAGCGTTTCTGTTGGGGTTGCTTTTGGTGGCGATGTTTGTTAGGGTGAAGAAGAGGACGAGAATGGAGGAGCTGGAAATTAGAGCGTACGAAGAGGAAGCTCTGCAGGTTTCAATGGTCGGACACGTCAGAGCTCCGACGGCTCCGGGGACTCGAACTTTGCCGTCGATCGAACATGAGTATTTGCCACCGTCTCGTCGACGCTGA

mRNA sequence

ATGGGCTTCTTCTTCTTTTTCTTCTTCTTCTCGTCGGCCTCATCAATGGCCTTCCTCAAAGCTCAGCCCCACAAACTCCAATCAACCCATCTTCTCGATCTCTACATCAGAGATTACACATTCAAGTCCCTCGACAACACAATCAAAACAGGGACACTTCACAACGTCCCACTGCCCCAAAATTTCTCCGGCGTCAACGTCGACACGGCCAGGTTCCGATGCGGAAGTTTACGGCGGTACGGCGCCAGGGTGAAGGAATTCCATCTGGGTGTCGGCGTTTCTTTGAACCCATGTGCGGAGAGAATCGTAATCATCCGACAAAATTTGGGCTCCAATTGGTCCTCCATTTACTTCAACAGCTACCATTTAACTGGTTACCAATTAGTGTCTTCAATTTTGGGGCTTTTGGCTTATAATTCCGGCTACTACAGTAATAGTTCCAGTTCCGCTGTTCCATTTGAGGTTGGAATATCTGCCGGAGAAAAACCCATCACGATAGACTTCAGAAACTCGACGAGAATGGAGAATGTTTCGGGAATGAGGCCAATTTGTGCGAGCTTTGAGAGGGATGGGAGAGTGACTTTGGCAAAGGAAATTTCGCCATTGATATGCTCTGTTTTGAGACAGGGCCATTTTGGGTTGGTAGTGGAGGAGCCAGAGCCGGTGGAGCTGAGGAAAAAGGAGCGGCCGTGGAAGGTAGCGATCGGGAGCTCGATTGGGGCGGCGATCGGAGCGTTTCTGTTGGGGTTGCTTTTGGTGGCGATGTTTGTTAGGGTGAAGAAGAGGACGAGAATGGAGGAGCTGGAAATTAGAGCGTACGAAGAGGAAGCTCTGCAGGTTTCAATGGTCGGACACGTCAGAGCTCCGACGGCTCCGGGGACTCGAACTTTGCCGTCGATCGAACATGAGTATTTGCCACCGTCTCGTCGACGCTGA

Coding sequence (CDS)

ATGGGCTTCTTCTTCTTTTTCTTCTTCTTCTCGTCGGCCTCATCAATGGCCTTCCTCAAAGCTCAGCCCCACAAACTCCAATCAACCCATCTTCTCGATCTCTACATCAGAGATTACACATTCAAGTCCCTCGACAACACAATCAAAACAGGGACACTTCACAACGTCCCACTGCCCCAAAATTTCTCCGGCGTCAACGTCGACACGGCCAGGTTCCGATGCGGAAGTTTACGGCGGTACGGCGCCAGGGTGAAGGAATTCCATCTGGGTGTCGGCGTTTCTTTGAACCCATGTGCGGAGAGAATCGTAATCATCCGACAAAATTTGGGCTCCAATTGGTCCTCCATTTACTTCAACAGCTACCATTTAACTGGTTACCAATTAGTGTCTTCAATTTTGGGGCTTTTGGCTTATAATTCCGGCTACTACAGTAATAGTTCCAGTTCCGCTGTTCCATTTGAGGTTGGAATATCTGCCGGAGAAAAACCCATCACGATAGACTTCAGAAACTCGACGAGAATGGAGAATGTTTCGGGAATGAGGCCAATTTGTGCGAGCTTTGAGAGGGATGGGAGAGTGACTTTGGCAAAGGAAATTTCGCCATTGATATGCTCTGTTTTGAGACAGGGCCATTTTGGGTTGGTAGTGGAGGAGCCAGAGCCGGTGGAGCTGAGGAAAAAGGAGCGGCCGTGGAAGGTAGCGATCGGGAGCTCGATTGGGGCGGCGATCGGAGCGTTTCTGTTGGGGTTGCTTTTGGTGGCGATGTTTGTTAGGGTGAAGAAGAGGACGAGAATGGAGGAGCTGGAAATTAGAGCGTACGAAGAGGAAGCTCTGCAGGTTTCAATGGTCGGACACGTCAGAGCTCCGACGGCTCCGGGGACTCGAACTTTGCCGTCGATCGAACATGAGTATTTGCCACCGTCTCGTCGACGCTGA

Protein sequence

MGFFFFFFFFSSASSMAFLKAQPHKLQSTHLLDLYIRDYTFKSLDNTIKTGTLHNVPLPQNFSGVNVDTARFRCGSLRRYGARVKEFHLGVGVSLNPCAERIVIIRQNLGSNWSSIYFNSYHLTGYQLVSSILGLLAYNSGYYSNSSSSAVPFEVGISAGEKPITIDFRNSTRMENVSGMRPICASFERDGRVTLAKEISPLICSVLRQGHFGLVVEEPEPVELRKKERPWKVAIGSSIGAAIGAFLLGLLLVAMFVRVKKRTRMEELEIRAYEEEALQVSMVGHVRAPTAPGTRTLPSIEHEYLPPSRRR

Homology

[Close]

BLAST of CmaCh02G014970 vs. TAIR 10
Match: AT4G22900.1 (Protein of unknown function (DUF1191) )

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-73
Identity = 146/319 (45.77%), Postives = 199/319 (62.38%), Query Frame = 0


Query: 16  MAFLKAQPHKLQSTHLLDLYIRDYTFKSLDNTIKTGTLHNVPLPQNFSGVNVDTARFRCG 75
           ++F +++   +QSTHLLDL IRDYT ++      TG    + LP NFSG+++DT + RCG
Sbjct: 15  LSFHQSKSQLIQSTHLLDLMIRDYTIRNFKLNFNTGVTQKIYLPSNFSGIDIDTVKLRCG 74

Query: 76  SLRRYGARVKEFHLGVGVSLNPCAERIVIIRQNLGSNWSSIYFNSYHLTG--YQLVSSIL 135
           SLRRYGA++ EFH+G G+++ PC ER+++IRQN GSNWSSIY   Y+L+G  Y+LVS +L
Sbjct: 75  SLRRYGAKIGEFHIGSGLTVEPCPERVMLIRQNFGSNWSSIYSTGYNLSGYNYKLVSPVL 134

Query: 136 GLLAYNSGYYSNSSSSAVPFEVG-ISAGEKPITIDFRNSTRMENVS------GMRPICAS 195
           GLLAYN+   +    +  P+EV  +   + PI IDF  +    N S          +CA 
Sbjct: 135 GLLAYNA---NPDGVARNPYEVNVVGTDQNPILIDFLINKATNNTSPNPTKKNSSVLCAC 194

Query: 196 FERDGRVTLAKEISPLICSVLRQGHFGLVVEEPEPVELRK-------------------- 255
           F  +   T ++++SP +C   RQGH+ LV++     +  +                    
Sbjct: 195 FTSNSNTTFSEQVSPYVCKGTRQGHYALVMKTEAQKDDHEGGGSSGGVVASSTEVNGGNG 254

Query: 256 --KERPWKVAIGSSIGAAIGAFLLGLLLVAMFVRVKKRTRMEELEIRAYEEEALQVSMVG 304
             K   WKVA+GS IG+ IGA LLG+L+VAM V+ KK+   EE+E RAYEEEALQVSMVG
Sbjct: 255 GGKLSRWKVAVGSVIGSGIGAILLGMLVVAMLVKGKKKAMREEMERRAYEEEALQVSMVG 314

[Close]

BLAST of CmaCh02G014970 vs. TAIR 10
Match: AT4G11950.1 (Protein of unknown function (DUF1191) )

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-68
Identity = 146/311 (46.95%), Postives = 194/311 (62.38%), Query Frame = 0


Query: 20  KAQPHKLQSTHLLDLYIRDYTFKSLDNTIKTGTLHNVPLPQNFSGVNVDTARFRCGSLRR 79
           K++   ++S H LDL IRDYT ++ +   KTG +  V LP NFS +++ TA+FRCGSLRR
Sbjct: 17  KSKSQTIESAHFLDLMIRDYTIRNFNIHFKTGAIQKVHLPSNFSSIDIATAKFRCGSLRR 76

Query: 80  YGARVKEFHLGVGVSLNPCAERIVIIRQNLGSNWSS-IYFNSYHLTG--YQLVSSILGLL 139
           +GAR+ EFHLG G+++ PC ER++++RQNLG NWSS IY   Y+LTG  Y+LVS +LGLL
Sbjct: 77  HGARIGEFHLGPGLTVEPCVERVILVRQNLGFNWSSYIYSTGYNLTGYKYRLVSPVLGLL 136

Query: 140 AYNSGYYSNSSSSAV-PFEVGISAGEK-PITIDF-----RNSTRMENVSGMRPICASFER 199
           AYN    SN    AV P+EV +   E+ PI I F       S +         +CA F  
Sbjct: 137 AYN----SNPDGVAVNPYEVNVMGTEQNPILIKFLSSEASGSPKPNTKKNSSVLCACFTS 196

Query: 200 DGRVTLAKEISPLICSVLRQGHFGLVVEEPE-----PVELRKKERP------------WK 259
           +G +T  +++S  +C   RQGH+ LV+   +        +     P            WK
Sbjct: 197 NGNITFREQVSAYVCLGTRQGHYALVIRAHDSGGGGSTVVTPSSSPALTDGGGGKLSRWK 256

Query: 260 VAIGSSIGAAIGAFLLGLLLVAMFVRVKKRTRMEELEIRAYEEEALQVSMVGHVRA-PTA 303
           VA+GS IG+ IGAFLLGLL+VAM V+ KK+   EE+E RAYEEEALQVSMVGHVRA P A
Sbjct: 257 VAVGSVIGSIIGAFLLGLLVVAMVVKGKKKAMREEMERRAYEEEALQVSMVGHVRANPNA 316

[Close]

BLAST of CmaCh02G014970 vs. TAIR 10
Match: AT1G62981.1 (Protein of unknown function (DUF1191) )

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-65
Identity = 138/302 (45.70%), Postives = 198/302 (65.56%), Query Frame = 0


Query: 27  QSTHLLDLYIRDYT---FKSLDNTIKTGTLHNVPLPQNFSGVNVDTARFRCGSLRRYGAR 86
           +S+ LLDL +RDYT   FK+   +IKTG +  V LP ++SG+ +D  RFRCGSLRRYGA+
Sbjct: 41  ESSRLLDLILRDYTLNFFKNQHYSIKTGVIRRVHLPSDYSGIKLDAVRFRCGSLRRYGAK 100

Query: 87  VKEFHLGVGVSLNPCAERIVIIRQNLGSNWSSIYFNSYHLTGYQLVSSILGLLAYNS--- 146
           ++EF++GVG  L PC ER++++RQ+LGS WS IY+ +Y L+GY+LVS +LGLLAYN+   
Sbjct: 101 IEEFNIGVGAILEPCGERLLVVRQSLGSKWSDIYYKNYDLSGYRLVSPVLGLLAYNALND 160

Query: 147 GYYSNSSSSAVPFEVGISAGEKPITIDFRN---STRMENVSGMRPICASFERDGRVTLAK 206
               N+ SS+    + ++  + P  +DF N    + +E     +P+CA+FE DG+VTLA 
Sbjct: 161 VVLGNNVSSSYQISLLLARTKDPSNVDFGNVSGPSVVERTFLNKPMCATFELDGKVTLAA 220

Query: 207 EISPLICSVLRQGHFGLVV-EEP------EPVELRKKERPWKVAIGSSIGA-AIGAFLLG 266
           E+ P +C+V   GHFGLVV ++P      E    ++K   W+  +G  +G+  +G  LLG
Sbjct: 221 EVKPFVCAVKTNGHFGLVVTDDPKSNGGGEKEMKKEKIGRWRKVVGGLVGSVTVGVVLLG 280

Query: 267 LLLVAMFVRVKKRTR---MEELEIRAYEEEALQ-VSMVGHVRAPTAPGTRTLPS-IEHEY 307
           L++ A  V  KKR R    EE+E +AYEEEA + VSMVGH RA  A  TRT P  +E+E+
Sbjct: 281 LVVAAAVVTAKKRRRRAKREEMERKAYEEEAFRVVSMVGHSRAFVASATRTSPGFMEYEF 340

[Close]

BLAST of CmaCh02G014970 vs. TAIR 10
Match: AT1G62981.2 (Protein of unknown function (DUF1191) )

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-65
Identity = 138/302 (45.70%), Postives = 198/302 (65.56%), Query Frame = 0


Query: 27  QSTHLLDLYIRDYT---FKSLDNTIKTGTLHNVPLPQNFSGVNVDTARFRCGSLRRYGAR 86
           +S+ LLDL +RDYT   FK+   +IKTG +  V LP ++SG+ +D  RFRCGSLRRYGA+
Sbjct: 41  ESSRLLDLILRDYTLNFFKNQHYSIKTGVIRRVHLPSDYSGIKLDAVRFRCGSLRRYGAK 100

Query: 87  VKEFHLGVGVSLNPCAERIVIIRQNLGSNWSSIYFNSYHLTGYQLVSSILGLLAYNS--- 146
           ++EF++GVG  L PC ER++++RQ+LGS WS IY+ +Y L+GY+LVS +LGLLAYN+   
Sbjct: 101 IEEFNIGVGAILEPCGERLLVVRQSLGSKWSDIYYKNYDLSGYRLVSPVLGLLAYNALND 160

Query: 147 GYYSNSSSSAVPFEVGISAGEKPITIDFRN---STRMENVSGMRPICASFERDGRVTLAK 206
               N+ SS+    + ++  + P  +DF N    + +E     +P+CA+FE DG+VTLA 
Sbjct: 161 VVLGNNVSSSYQISLLLARTKDPSNVDFGNVSGPSVVERTFLNKPMCATFELDGKVTLAA 220

Query: 207 EISPLICSVLRQGHFGLVV-EEP------EPVELRKKERPWKVAIGSSIGA-AIGAFLLG 266
           E+ P +C+V   GHFGLVV ++P      E    ++K   W+  +G  +G+  +G  LLG
Sbjct: 221 EVKPFVCAVKTNGHFGLVVTDDPKSNGGGEKEMKKEKIGRWRKVVGGLVGSVTVGVVLLG 280

Query: 267 LLLVAMFVRVKKRTR---MEELEIRAYEEEALQ-VSMVGHVRAPTAPGTRTLPS-IEHEY 307
           L++ A  V  KKR R    EE+E +AYEEEA + VSMVGH RA  A  TRT P  +E+E+
Sbjct: 281 LVVAAAVVTAKKRRRRAKREEMERKAYEEEAFRVVSMVGHSRAFVASATRTSPGFMEYEF 340

[Close]

BLAST of CmaCh02G014970 vs. TAIR 10
Match: AT3G08600.1 (Protein of unknown function (DUF1191) )

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-32
Identity = 103/297 (34.68%), Postives = 156/297 (52.53%), Query Frame = 0


Query: 28  STHLLDLYIRDYTFKSLDNTIKTGTLHN-VPLPQNFSGVNVDTARFRCGSLRRYGAR-VK 87
           S+  LD  ++DY+F++L    +TG L+    +P N +G+ +   R R GS R+ G     
Sbjct: 33  SSSSLDALLQDYSFRALLRP-RTGILYEATTVPSNLTGIKLAAMRLRSGSFRKRGVTPFN 92

Query: 88  EFHLGVGVSLNPCAERIVIIRQNLGSNWSSIYFNSYHLTGYQLVSSILGLLAYNSGYYSN 147
           EF +  GV + P   R+V++ QNL +N+S +Y   Y L+GY  V+ +LGLLAY++    N
Sbjct: 93  EFSIPSGVIVKPYVTRLVLVYQNL-ANFSHLY---YPLSGYDYVAPVLGLLAYDA---KN 152

Query: 148 SSSSAVPFEVGISAGEKPITIDFRNSTRMENVSGMRPICASFERDGRVTLAKEISP-LIC 207
            S+  +P ++ +     PI IDF +  R+   S  +  C  F+  G  + +  I P   C
Sbjct: 153 LSALNLP-QLDLRVSNDPIRIDFSDLERIPQGSSAK--CVRFDSKGEASFSDSIQPGNTC 212

Query: 208 SVLRQGHFGLVVEE--------PEPVELRKKE-------RPWKVAIGSSIGAAIGAFLLG 267
               QGHF +VV+         P  +E +KK+       + W + +GS +G   G  LLG
Sbjct: 213 ETEHQGHFSVVVKSVASAPSLAPPGIESKKKKKSSDSNSKTW-IIVGSVVG---GLILLG 272

Query: 268 LL--LVAMFVRVKKRTRMEELEIRAYEEEALQVSMVGHVRAPTAPGTRTLPSIEHEY 305
           LL  LV      KK+ +M E+E      EAL+++ VG  RAPTA  TRT P +E EY
Sbjct: 273 LLLFLVLRCRNYKKQEKMREMERAGETGEALRMTQVGETRAPTATTTRTQPMLETEY 314

The following BLAST results are available for this feature:

BLAST of CmaCh02G014970 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh02G014970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22900.1	2.8e-73	45.77	Protein of unknown function (DUF1191)	[more]
AT4G11950.1	3.5e-68	46.95	Protein of unknown function (DUF1191)	[more]
AT1G62981.1	1.3e-65	45.70	Protein of unknown function (DUF1191)	[more]
AT1G62981.2	1.3e-65	45.70	Protein of unknown function (DUF1191)	[more]
AT3G08600.1	2.4e-32	34.68	Protein of unknown function (DUF1191)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010605	Protein of unknown function DUF1191	PFAM	PF06697	DUF1191	coord: 27..217 e-value: 2.9E-61 score: 206.4
IPR010605	Protein of unknown function DUF1191	PANTHER	PTHR33512	PROTEIN, PUTATIVE (DUF1191)-RELATED	coord: 5..305
None	No IPR available	PANTHER	PTHR33512:SF1	PROTEIN, PUTATIVE (DUF1191)-RELATED	coord: 5..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G014970.1	CmaCh02G014970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane