Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATATCTCAGGTTGTGGTTACAGCTATGATCGCTTACAAGTTCGGCCTCGATGGAGTTGCCGGGGAATTGTCGAAGGAGTATGCCGGGGCAGTGATGTTGTTCATATGCATATACACTGCAGGGTTTGCTTGGTCGTGGGGGCCTTTGGGATGGTTGGTTCCAAGTGAAATATTTTCTCTAGAAGTTCGATCGGCCCTTCAAAGTGTGAACGTTTGGGTGAATATGATCTTCACTTTTGTGGTTGCTCATGCGTTCACGGCTATGCTGTGCCACATGAAATTTGGGATGTTCATATTTTTTGCGTTCTTCGTGGTGGTGATGAGCATTTTCATATACAAGTTTCTGCCGGAGACAAAGGGTGTGCCTATTGAAGCGATGACTCTTGTTTGGCAGAAACATCCGTATTGGGCAAAATATGTGACCCAAGATCAAACTCAAACTCACACAACTGAAACCCCACGTACCTCTTCCGATTAG
mRNA sequence
ATGTTCATATCTCAGGTTGTGGTTACAGCTATGATCGCTTACAAGTTCGGCCTCGATGGAGTTGCCGGGGAATTGTCGAAGGAGTATGCCGGGGCAGTGATGTTGTTCATATGCATATACACTGCAGGGTTTGCTTGGTCGTGGGGGCCTTTGGGATGGTTGGTTCCAAGTGAAATATTTTCTCTAGAAGTTCGATCGGCCCTTCAAAGTGTGAACGTTTGGGTGAATATGATCTTCACTTTTGTGGTTGCTCATGCGTTCACGGCTATGCTGTGCCACATGAAATTTGGGATGTTCATATTTTTTGCGTTCTTCGTGGTGGTGATGAGCATTTTCATATACAAGTTTCTGCCGGAGACAAAGGGTGTGCCTATTGAAGCGATGACTCTTGTTTGGCAGAAACATCCGTATTGGGCAAAATATGTGACCCAAGATCAAACTCAAACTCACACAACTGAAACCCCACGTACCTCTTCCGATTAG
Coding sequence (CDS)
ATGTTCATATCTCAGGTTGTGGTTACAGCTATGATCGCTTACAAGTTCGGCCTCGATGGAGTTGCCGGGGAATTGTCGAAGGAGTATGCCGGGGCAGTGATGTTGTTCATATGCATATACACTGCAGGGTTTGCTTGGTCGTGGGGGCCTTTGGGATGGTTGGTTCCAAGTGAAATATTTTCTCTAGAAGTTCGATCGGCCCTTCAAAGTGTGAACGTTTGGGTGAATATGATCTTCACTTTTGTGGTTGCTCATGCGTTCACGGCTATGCTGTGCCACATGAAATTTGGGATGTTCATATTTTTTGCGTTCTTCGTGGTGGTGATGAGCATTTTCATATACAAGTTTCTGCCGGAGACAAAGGGTGTGCCTATTGAAGCGATGACTCTTGTTTGGCAGAAACATCCGTATTGGGCAAAATATGTGACCCAAGATCAAACTCAAACTCACACAACTGAAACCCCACGTACCTCTTCCGATTAG
Protein sequence
MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIFSLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPETKGVPIEAMTLVWQKHPYWAKYVTQDQTQTHTTETPRTSSD
Homology
BLAST of CmaCh02G014830 vs. ExPASy Swiss-Prot
Match:
Q41144 (Sugar carrier protein C OS=Ricinus communis OX=3988 GN=STC PE=2 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 5.7e-51
Identity = 97/145 (66.90%), Postives = 116/145 (80.00%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M I Q +V A I KFG+DG G+L + YA V+LFICIY +GFAWSWGPLGWLVPSEIF
Sbjct: 360 MLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIF 419
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QSVNV VNM FTFVVA F MLCH+KFG+FIFF+FFV++MSIF+Y FLPET
Sbjct: 420 PLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYYFLPET 479
Query: 121 KGVPIEAMTLVWQKHPYWAKYVTQD 146
KG+PIE M VW++H YW++YV +
Sbjct: 480 KGIPIEEMGQVWKQHWYWSRYVVDE 504
BLAST of CmaCh02G014830 vs. ExPASy Swiss-Prot
Match:
O65413 (Sugar transport protein 12 OS=Arabidopsis thaliana OX=3702 GN=STP12 PE=2 SV=1)
HSP 1 Score: 201.4 bits (511), Expect = 7.5e-51
Identity = 101/149 (67.79%), Postives = 116/149 (77.85%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M ISQV V A I KFG+DG G L K YA V+LFICIY A FAWSWGPLGWLVPSEIF
Sbjct: 356 MLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIF 415
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QS+ V VNMIFTF++A F MLCH+KFG+FIFFAFFVVVMSIF+Y FLPET
Sbjct: 416 PLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFLPET 475
Query: 121 KGVPIEAMTLVWQKHPYWAKYVTQDQTQT 150
+GVPIE M VW+ H YW+K+V ++ T
Sbjct: 476 RGVPIEEMNRVWRSHWYWSKFVDAEKNLT 504
BLAST of CmaCh02G014830 vs. ExPASy Swiss-Prot
Match:
P23586 (Sugar transport protein 1 OS=Arabidopsis thaliana OX=3702 GN=STP1 PE=1 SV=2)
HSP 1 Score: 198.4 bits (503), Expect = 6.3e-50
Identity = 97/142 (68.31%), Postives = 112/142 (78.87%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M I Q VV A I KFG+DG GEL K YA V+ FICIY AGFAWSWGPLGWLVPSEIF
Sbjct: 358 MLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIF 417
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QS+ V VNMIFTF++A F MLCH+KFG+F+ FAFFVVVMSIF+Y FLPET
Sbjct: 418 PLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPET 477
Query: 121 KGVPIEAMTLVWQKHPYWAKYV 143
KG+PIE M VW+ H YW+++V
Sbjct: 478 KGIPIEEMGQVWRSHWYWSRFV 499
BLAST of CmaCh02G014830 vs. ExPASy Swiss-Prot
Match:
Q7EZD7 (Sugar transport protein MST3 OS=Oryza sativa subsp. japonica OX=39947 GN=MST3 PE=2 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46
Identity = 91/142 (64.08%), Postives = 112/142 (78.87%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M + QVVV +IA KFG G+ G++ K YA V+LFIC+Y AGFAWSWGPLGWLVPSEIF
Sbjct: 359 MVVCQVVVGTLIAVKFGTSGI-GDIPKGYAAVVVLFICMYVAGFAWSWGPLGWLVPSEIF 418
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+R A QS+NV VNM+FTFV+A AF MLCHMKFG+F FFA +VV+M++FI FLPET
Sbjct: 419 PLEIRPAGQSINVSVNMLFTFVIAQAFLTMLCHMKFGLFYFFAGWVVIMTVFIALFLPET 478
Query: 121 KGVPIEAMTLVWQKHPYWAKYV 143
K VPIE M LVW+ H +W +++
Sbjct: 479 KNVPIEEMVLVWKSHWFWRRFI 499
BLAST of CmaCh02G014830 vs. ExPASy Swiss-Prot
Match:
Q6ZKF0 (Sugar transport protein MST5 OS=Oryza sativa subsp. japonica OX=39947 GN=MST5 PE=2 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 91/143 (63.64%), Postives = 114/143 (79.72%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
MFISQVVV +IA +FG+ GV GE+S+ YA ++LFIC+Y AGFAWSWGPLGWLVPSE+F
Sbjct: 358 MFISQVVVGTLIALQFGVAGV-GEMSRSYAILLVLFICMYVAGFAWSWGPLGWLVPSEVF 417
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
+LE+RSA QS+ V VNM+ TFV+ AF MLCH+KFG+F FFA +++VM+ F+ FLPET
Sbjct: 418 ALEIRSAGQSIAVCVNMMLTFVIGQAFLTMLCHLKFGLFYFFAGWMLVMTTFVALFLPET 477
Query: 121 KGVPIEAMTLVWQKHPYWAKYVT 144
KGVPIE M VW +H +W YVT
Sbjct: 478 KGVPIEEMNHVWSRHWFWGSYVT 499
BLAST of CmaCh02G014830 vs. TAIR 10
Match:
AT4G21480.1 (sugar transporter protein 12 )
HSP 1 Score: 201.4 bits (511), Expect = 5.3e-52
Identity = 100/142 (70.42%), Postives = 113/142 (79.58%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M ISQV V A I KFG+DG G L K YA V+LFICIY A FAWSWGPLGWLVPSEIF
Sbjct: 356 MLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIF 415
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QS+ V VNMIFTF++A F MLCH+KFG+FIFFAFFVVVMSIF+Y FLPET
Sbjct: 416 PLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFLPET 475
Query: 121 KGVPIEAMTLVWQKHPYWAKYV 143
+GVPIE M VW+ H YW+K+V
Sbjct: 476 RGVPIEEMNRVWRSHWYWSKFV 497
BLAST of CmaCh02G014830 vs. TAIR 10
Match:
AT1G11260.1 (sugar transporter 1 )
HSP 1 Score: 198.4 bits (503), Expect = 4.5e-51
Identity = 97/142 (68.31%), Postives = 112/142 (78.87%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M I Q VV A I KFG+DG GEL K YA V+ FICIY AGFAWSWGPLGWLVPSEIF
Sbjct: 358 MLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIF 417
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QS+ V VNMIFTF++A F MLCH+KFG+F+ FAFFVVVMSIF+Y FLPET
Sbjct: 418 PLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPET 477
Query: 121 KGVPIEAMTLVWQKHPYWAKYV 143
KG+PIE M VW+ H YW+++V
Sbjct: 478 KGIPIEEMGQVWRSHWYWSRFV 499
BLAST of CmaCh02G014830 vs. TAIR 10
Match:
AT3G19930.1 (sugar transporter 4 )
HSP 1 Score: 179.1 bits (453), Expect = 2.8e-45
Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M +SQ+ + AMI KFG+ G G + K A ++ ICIY AGFAWSWGPLGWLVPSEI
Sbjct: 357 MLVSQIAIGAMIGVKFGVAG-TGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEIS 416
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA Q++NV VNM FTF+VA F MLCHMKFG+F FFAFFVV+M+IFIY LPET
Sbjct: 417 PLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLMLPET 476
Query: 121 KGVPIEAMTLVWQKHPYWAKYVTQDQTQTHTTETPRTS 159
K VPIE M VW+ H +W K++ + E + S
Sbjct: 477 KNVPIEEMNRVWKAHWFWGKFIPDEAVNMGAAEMQQKS 513
BLAST of CmaCh02G014830 vs. TAIR 10
Match:
AT5G23270.1 (sugar transporter 11 )
HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43
Identity = 87/145 (60.00%), Postives = 105/145 (72.41%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M ++Q+ V +MI +KFG +G G LS A ++ IC+Y AGFAWSWGPLGWLVPSEI
Sbjct: 360 MIVTQIAVGSMIGWKFGFNG-EGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEIC 419
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+RSA QS+NV VNM FTF + F MLCHMKFG+F FFA V++M+IFIY LPET
Sbjct: 420 PLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKFGLFYFFAGMVLIMTIFIYFLLPET 479
Query: 121 KGVPIEAMTLVWQKHPYWAKYVTQD 146
KGVPIE M VW++H YW KY D
Sbjct: 480 KGVPIEEMGKVWKEHRYWGKYSNND 503
BLAST of CmaCh02G014830 vs. TAIR 10
Match:
AT1G50310.1 (sugar transporter 9 )
HSP 1 Score: 171.4 bits (433), Expect = 5.9e-43
Identity = 84/145 (57.93%), Postives = 105/145 (72.41%), Query Frame = 0
Query: 1 MFISQVVVTAMIAYKFGLDGVAGELSKEYAGAVMLFICIYTAGFAWSWGPLGWLVPSEIF 60
M +SQ+VV +I KFG G +G L+ A ++ FIC+Y AGFAWSWGPLGWLVPSEI
Sbjct: 360 MIVSQIVVGTLIGMKFGTTG-SGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEIC 419
Query: 61 SLEVRSALQSVNVWVNMIFTFVVAHAFTAMLCHMKFGMFIFFAFFVVVMSIFIYKFLPET 120
LE+R A Q++NV VNM FTF++ F MLCHMKFG+F FF V VM++FIY LPET
Sbjct: 420 PLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYFLLPET 479
Query: 121 KGVPIEAMTLVWQKHPYWAKYVTQD 146
KGVPIE M VW++HP+W +Y+ D
Sbjct: 480 KGVPIEEMGRVWKQHPFWKRYMPDD 503
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q41144 | 5.7e-51 | 66.90 | Sugar carrier protein C OS=Ricinus communis OX=3988 GN=STC PE=2 SV=1 | [more] |
O65413 | 7.5e-51 | 67.79 | Sugar transport protein 12 OS=Arabidopsis thaliana OX=3702 GN=STP12 PE=2 SV=1 | [more] |
P23586 | 6.3e-50 | 68.31 | Sugar transport protein 1 OS=Arabidopsis thaliana OX=3702 GN=STP1 PE=1 SV=2 | [more] |
Q7EZD7 | 2.5e-46 | 64.08 | Sugar transport protein MST3 OS=Oryza sativa subsp. japonica OX=39947 GN=MST3 PE... | [more] |
Q6ZKF0 | 2.1e-45 | 63.64 | Sugar transport protein MST5 OS=Oryza sativa subsp. japonica OX=39947 GN=MST5 PE... | [more] |