CmaCh02G008870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G008870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pyridoxal 5'-phosphate synthase subunit PdxT
Location	Cma_Chr02: 5263257 .. 5265979 (-)
RNA-Seq Expression	CmaCh02G008870
Synteny	CmaCh02G008870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTGTTCAATTAATACACGGTTCTGAATCTCTCTTTAACTCCCTCCCTGATTTTTCGTCGCCGGAGCCGGAGCTCGGCGGCCTGAAAGCTCCAATTCCCTAACATGGCGACCGTCGGCGTCCTAGCATTGCAGGGATCTTATAACGAGAACATCGCAGGCATTTTCTCCTCCTCCTCCTCCTCCTTCTCTATCGCTAGCTCCATCTGTAATAGGCGTTTCTACGGATATTTCATTTCATTTCGTTATCTTTTTCTTATTACGAGTTTTCGGCCTTAATTGATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGAGCGTAGAGATAAGGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGGTTTGTTCCTCTTTTCTTTAGACGTTGCTACATCTGTATTCGTCTTTAAAGATTTTCTTTAGTTTGGCCGAAATACATGAAGAGCGAACACGTGAGTAAGCGGAAAAGTTGCAAGATCTTGCATTCAATCGTGAACCAAACAGAAATGTAATTTTTAATTTAAAATTGTTGAACGCTATTTTATCGGGTTAGACATACCAACATCCCAAATGTATGAAACGATCGTCTGTGTAAGTCTGGATTGGTTAATTTCTGATAATACATAGAACTAAAATCGAGTATAGTATTTATATTGTGGTATTTTTGTGTATTGCAGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGTAGACTTCGTTCCATTTTCCCTGAATAAAATGCTTGAAATGTGTTTCAAACTTGATTGGATACAGTGTATACATGTATTTTCAGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGCAGTCAGGTAACTCTGGTTTCTCATGTTGGGTTGTGCTATCAAAATGGATGAGCAATATCTGGTAAACAAAAGAACCTTGGGAATTAGTACAGAACATGCTTAAGGATATTAGGAATCAAATTTGCATGAAGGCGGCCTCTGCCTGTGTTGTTTTGTTGCAGACATGGATTTGTCCCATCAAAAAATGACTTTGTATCAACTCAAAAAATGGCTTTGTCCCATCAAAAACTCAATACCGGGTCTAAATTCTCCGTATGATAAGCATCATGAGAACCAGTGAAATGAAGTTTGTGAGAACGAGTGCTAACGAAAACGCTGAGCCTCAAAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAGAGTAGACGCGTTTTAAAAACGTGGAGGGAAAAGGGTAAGGAAAAACTAAAAGAGAACAATATCTGCTAGCGGTGAGTTTGAGTTGTTACAAAGTTTTAATTGTAGTGTGGAATTCAGAATGCAGAGAATCCTCGATGGTTTTTGTTGTACATAAGCTGATCCAAACACAGTTATCCAATGACTTTTGCTTAGATTTTGTTTCCGAGTGTTCAGTTTCTTTTCCTGAATACCAGTATTACTAAAAAGTATAGCAAGCCCCTTTAACTTGTTGTTGAAGTTCGCTTTATTTTCACTGTCAATCTCTTGAGTTCAGATTTTCCTAATTTAAGAAGATCATGATTATCTAGCTTCAAAGCTTCTAAACGGAGCTATCAATTCCAGAGCTTGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGTGGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTTGTTTTCTTTCATCATTCCTTCATCTCGTATAATCTATACACTGCTATTGCCACTAATTTGTACGTCTAAATGATTGTTATCTGTATACATGAGGCAAAAGTTTCAGACTATAAGCTGATCTATCTTGTGAGATCTCACCAGTTGGGATGAGAACGAATCATTCTTTATAAAGGTGTTGAAACCTTGAGGGGAGCCCGAAAGGGAAAGCCTAAATAGTATAATATCTGCTAGCGGTGAGATTTTACTTTTACAAATGGTATTAGAGCCAAGTTTCGATCCTTGGGAATGGAGTTTTGCTTTTGTGTTCGTTTTCCTTCTATCTCTCGACTCTGGTTTGAATATCTCAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCCGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGTATAGTGTAGTTTTAGCTTGAAATACATCACATCACTTAATAAATATTATGATAATCATCTCAATTGAGTTAATAACGATGAATTATGCAGGCACAGTTACTGTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGACTCGAACGATCGAACATCGACCTTCCAATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCTCAACTCAGTTTTACATTTTTCAAGTTTCATTGCAGGTTCAGTCTTTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTACTCACTTTCTCGACGCATTATTTTAAATAACA

mRNA sequence

GAAGTGTTCAATTAATACACGGTTCTGAATCTCTCTTTAACTCCCTCCCTGATTTTTCGTCGCCGGAGCCGGAGCTCGGCGGCCTGAAAGCTCCAATTCCCTAACATGGCGACCGTCGGCGTCCTAGCATTGCAGGGATCTTATAACGAGAACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGAGCGTAGAGATAAGGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGCAGTCAGCTATCAATTCCAGAGCTTGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGTGGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCCGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTGTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGACTCGAACGATCGAACATCGACCTTCCAATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCTCAACTCAGTTTTACATTTTTCAAGTTTCATTGCAGGTTCAGTCTTTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTACTCACTTTCTCGACGCATTATTTTAAATAACA

Coding sequence (CDS)

ATGGCGACCGTCGGCGTCCTAGCATTGCAGGGATCTTATAACGAGAACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGAGCGTAGAGATAAGGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGCAGTCAGCTATCAATTCCAGAGCTTGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGTGGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCCGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTGTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGACTCGAACGATCGAACATCGACCTTCCAATTTTTCTTTAG

Protein sequence

MATVGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLFPSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLSIPELVSTEGGPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKGAEDKVIVAVRQGNLLATAFHPELTSDNRWHSYCLKMAGDVEGSSSSIASIGVDNSRLERSNIDLPIFL

Homology

[Close]

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.3e-91
Identity = 174/253 (68.77%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 3   TVGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLF 62
           TVGVLALQGS+NE+IAALRRLGV+ VEIRK +QLL V+SLIIPGGESTTMAKLAE HNLF
Sbjct: 2   TVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNLF 61

Query: 63  PSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLS----- 122
           P+LREFV+MGKPVWGTCAGLIFLA++A GQK GGQELVGGLDCTVHRNFFGSQ+      
Sbjct: 62  PALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEAD 121

Query: 123 --IPELVSTEGGPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKG 182
             +P+L S EGGPET+RGVFIRAPA+L VGP+V+VLA  PV SN  L+S+S+ + +EE  
Sbjct: 122 ILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEEDA 181

Query: 183 -AEDKVIVAVRQGNLLATAFHPELTSDNRWHSYCLKMAGDVE-----GSSSSIASIGVDN 242
             E KVIVAV+QGNLLATAFHPELT+D RWHSY +KM  ++E      SS +I S+G  +
Sbjct: 182 LPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGETS 241

[Close]

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.9e-40
Identity = 95/215 (44.19%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 4   VGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLFP 63
           +GVLALQG++ E+I  LR LG ++VE+RK E+L +++ LIIPGGESTT+ KL     L  
Sbjct: 3   IGVLALQGAFREHINMLRTLGAEAVEVRKAEELAELSGLIIPGGESTTITKLLYTFGLAK 62

Query: 64  SLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQL----SIP 123
            +++  R G PVWGTCAG+I LA + +G  +G + L   +D TV RN FG Q+    ++ 
Sbjct: 63  PVKDLARNGMPVWGTCAGMICLAKELSGDISGVKTL-ELMDITVRRNAFGRQVDSFEAML 122

Query: 124 ELVSTEGGPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKGAEDK 183
           ++ + EGG   F  VFIRAP +   G  V+VLA  P                      D 
Sbjct: 123 KVKALEGG--DFPAVFIRAPLVEKTGQWVEVLAKLP----------------------DG 182

Query: 184 VIVAVRQGNLLATAFHPELTSDNRWHSYCLKMAGD 215
            +VAVR+ NLLAT+FHPEL++DNR+H Y ++MA D
Sbjct: 183 TMVAVRENNLLATSFHPELSADNRFHRYFVQMAKD 192

[Close]

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot
Match: Q47N39 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Thermobifida fusca (strain YX) OX=269800 GN=pdxT PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-39
Identity = 94/213 (44.13%), Postives = 123/213 (57.75%), Query Frame = 0


Query: 3   TVGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLF 62
           T+GVLALQG   E+I AL + G ++  IR+P++L  +  LI+PGGESTTM +LA +  L 
Sbjct: 7   TIGVLALQGDVREHIHALEQAGARARRIRRPDELDSIDGLILPGGESTTMGRLAAVFGLL 66

Query: 63  PSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLS----I 122
             LRE +  G P +GTCAG+I LA++       GQ+ +GG+D TV RN FG Q++     
Sbjct: 67  TPLRERIAAGLPAYGTCAGMIMLADR-LADGAPGQQTIGGIDMTVRRNAFGRQVASFEGT 126

Query: 123 PELVSTEGGPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKGAED 182
            E+   +GGP     VFIRAP +   GP VQVL                  G+  +G   
Sbjct: 127 VEMTGVDGGP--VEAVFIRAPWVESTGPGVQVL------------------GRISRGDTA 186

Query: 183 KVIVAVRQGNLLATAFHPELTSDNRWHSYCLKM 212
             IVAVRQG LLAT+FHPELT D R H   + M
Sbjct: 187 GRIVAVRQGRLLATSFHPELTGDTRVHRLFVDM 198

[Close]

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot
Match: B8G664 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=pdxT PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.6e-39
Identity = 94/212 (44.34%), Postives = 120/212 (56.60%), Query Frame = 0


Query: 3   TVGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLF 62
           TVGVLALQG + E+ A LRR+GV+ +E+R P QL  V  LIIPGGESTT+ +L  ++ + 
Sbjct: 2   TVGVLALQGDFREHCAVLRRIGVEPIEVRLPHQLAQVDHLIIPGGESTTIGRLLAIYQML 61

Query: 63  PSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLSIPELV 122
             +R        +WGTCAG I LAN+   QK GGQ  +G ++ T+ RN +GSQL   E  
Sbjct: 62  EPIRTRGGCDLAIWGTCAGAILLANEVMDQKQGGQPTLGLMNLTIRRNAYGSQLDSFEAP 121

Query: 123 STEG--GPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKG-AEDK 182
            T    G E   GVFIRAP I+ +                       G+G E  G  ED 
Sbjct: 122 ITMPIIGEEPLPGVFIRAPQIMAL-----------------------GQGCEAVGWLEDG 181

Query: 183 VIVAVRQGNLLATAFHPELTSDNRWHSYCLKM 212
            +VA RQG LLAT FHPELT D+R H   L++
Sbjct: 182 SVVAARQGRLLATTFHPELTHDDRVHRLFLEL 190

[Close]

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot
Match: Q81ZV5 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=pdxT PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38
Identity = 97/210 (46.19%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 4   VGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLFP 63
           +GVLALQG   E++ AL      + E+R+PE+L +V  L+IPGGESTT++KLA L  +  
Sbjct: 6   IGVLALQGDVREHLIALAAADAVAREVRRPEELAEVDGLVIPGGESTTISKLAHLFGMME 65

Query: 64  SLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQ-LSIPELV 123
            LR  VR G PV+GTCAG+I LA+K    ++ GQE +GG+D  V RN FG Q  S    V
Sbjct: 66  PLRARVRGGMPVYGTCAGMIMLADKILDPRS-GQETIGGIDMIVRRNAFGRQNESFEATV 125

Query: 124 STEG-GPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKGAEDKVI 183
             +G G +   GVFIRAP +  VG E +VLA                    E G     I
Sbjct: 126 DVKGVGGDPVEGVFIRAPWVESVGAEAEVLA--------------------EHGGH---I 185

Query: 184 VAVRQGNLLATAFHPELTSDNRWHSYCLKM 212
           VAVRQGN LAT+FHPELT D+R H   + M
Sbjct: 186 VAVRQGNALATSFHPELTGDHRVHGLFVDM 191

[Close]

BLAST of CmaCh02G008870 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 )

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-93
Identity = 174/253 (68.77%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 3   TVGVLALQGSYNENIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHNLF 62
           TVGVLALQGS+NE+IAALRRLGV+ VEIRK +QLL V+SLIIPGGESTTMAKLAE HNLF
Sbjct: 2   TVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNLF 61

Query: 63  PSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLS----- 122
           P+LREFV+MGKPVWGTCAGLIFLA++A GQK GGQELVGGLDCTVHRNFFGSQ+      
Sbjct: 62  PALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEAD 121

Query: 123 --IPELVSTEGGPETFRGVFIRAPAILVVGPEVQVLAHCPVSSNSTLHSNSSGEGKEEKG 182
             +P+L S EGGPET+RGVFIRAPA+L VGP+V+VLA  PV SN  L+S+S+ + +EE  
Sbjct: 122 ILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEEDA 181

Query: 183 -AEDKVIVAVRQGNLLATAFHPELTSDNRWHSYCLKMAGDVE-----GSSSSIASIGVDN 242
             E KVIVAV+QGNLLATAFHPELT+D RWHSY +KM  ++E      SS +I S+G  +
Sbjct: 182 LPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGETS 241

The following BLAST results are available for this feature:

BLAST of CmaCh02G008870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAD0	1.3e-91	68.77	Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX...	[more]
Q3Z8V9	6.9e-40	44.19	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain...	[more]
Q47N39	5.8e-39	44.13	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Thermobifida fusca (strain YX) O...	[more]
B8G664	7.6e-39	44.34	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aggregans (strain M...	[more]
Q81ZV5	1.3e-38	46.19	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Streptomyces avermitilis (strain...	[more]

BLAST of CmaCh02G008870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60540.1	9.4e-93	68.77	pyridoxine biosynthesis 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PFAM	PF01174	SNO	coord: 6..211 e-value: 9.7E-42 score: 142.9
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	TIGRFAM	TIGR03800	TIGR03800	coord: 4..153 e-value: 1.8E-43 score: 146.6
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PIRSF	PIRSF005639	Glut_amidoT_SNO	coord: 1..216 e-value: 3.0E-69 score: 230.4
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PANTHER	PTHR31559	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO	coord: 2..227
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PROSITE	PS51130	PDXT_SNO_2	coord: 3..213 score: 53.649803
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	HAMAP	MF_01615	PdxT	coord: 4..211 score: 31.075317
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	CDD	cd01749	GATase1_PB	coord: 4..207 e-value: 4.21943E-91 score: 264.387
IPR029062	Class I glutamine amidotransferase-like	GENE3D	3.40.50.880		coord: 1..221 e-value: 6.4E-71 score: 240.3
IPR029062	Class I glutamine amidotransferase-like	SUPERFAMILY	52317	Class I glutamine amidotransferase-like	coord: 3..211
None	No IPR available	PANTHER	PTHR31559:SF1	SUBFAMILY NOT NAMED	coord: 2..227
None	No IPR available	PROSITE	PS51274	GATASE_COBBQ	coord: 1..203 score: 10.706521
None	No IPR available	PROSITE	PS51273	GATASE_TYPE_1	coord: 3..214 score: 11.299553
IPR021196	PdxT/SNO family, conserved site	PROSITE	PS01236	PDXT_SNO_1	coord: 41..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G008870.1	CmaCh02G008870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0008614	pyridoxine metabolic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:1903600	glutaminase complex
molecular_function	GO:0004359	glutaminase activity