CmaCh02G000360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G000360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cma_Chr02: 192688 .. 193497 (+)
RNA-Seq Expression	CmaCh02G000360
Synteny	CmaCh02G000360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCATGAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCAGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCCTCCTATCTTACCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCCGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATGCTTGGGGCTCTTGGGTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCGGGTGGGCCGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGGAGCTTCGACCCATTGGGGCTGGCGGACGACCCAGAGGCCTTCGCCGAGCTCAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCTGACCCTGTTAACAACAACGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA

mRNA sequence

ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCATGAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCAGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCCTCCTATCTTACCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCCGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATGCTTGGGGCTCTTGGGTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCGGGTGGGCCGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGGAGCTTCGACCCATTGGGGCTGGCGGACGACCCAGAGGCCTTCGCCGAGCTCAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCTGACCCTGTTAACAACAACGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA

Coding sequence (CDS)

ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCATGAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCAGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCCTCCTATCTTACCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCCGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATGCTTGGGGCTCTTGGGTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCGGGTGGGCCGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGGAGCTTCGACCCATTGGGGCTGGCGGACGACCCAGAGGCCTTCGCCGAGCTCAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCTGACCCTGTTAACAACAACGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA

Protein sequence

MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

Homology

[Close]

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot
Match: P12333 (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.4e-142
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           A+S+MALSSPSLAG+AVKL P  AS ++GE R+TMRKTAG+PK V S SPWYGPDRVKYL
Sbjct: 2   ASSTMALSSPSLAGKAVKLGP-TASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAW FATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-140
Identity = 241/267 (90.26%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AAS+MALSSPS AG+AVKLSP ++S + G  +VTMRKTA + K VSSGSPWYGPDRVKYL
Sbjct: 2   AASTMALSSPSFAGKAVKLSP-SSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.7e-140
Identity = 242/267 (90.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           A S+MALSS + AG+AVKLSP ++S + G  RVTMRKTA + KP SSGSPWYGPDRVKYL
Sbjct: 2   ATSTMALSSSTFAGKAVKLSP-SSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot
Match: P27491 (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 1.9e-139
Identity = 237/266 (89.10%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 4   ASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLG 63
           AS+MALSSPS AG AVKLSP ++S + G  +  MRKT  + KPVSSGSPWYGPDRVKYLG
Sbjct: 3   ASTMALSSPSFAGNAVKLSP-SSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLG 62

Query: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 123
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 63  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 122

Query: 124 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 183
           RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA+EGYR+AGG
Sbjct: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGG 182

Query: 184 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243
           PLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 183 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242

Query: 244 ENLADHLADPVNNNAWAFATNFVPGK 270
           +NL DHLADPVNNNAWA+ATNFVPGK
Sbjct: 243 DNLVDHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-139
Identity = 246/269 (91.45%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60
           MAAASSMALSSPSLAG+AVKL P+A        RV+MRKT    K VSSGSPWYGPDRVK
Sbjct: 1   MAAASSMALSSPSLAGKAVKLGPSAPE----VGRVSMRKTV--TKQVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180
           LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRI
Sbjct: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRI 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 270
           GPLENLADHLA PVNNNAWA+ATNFVPGK
Sbjct: 241 GPLENLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL
Match: A0A6J1I6A9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469589 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.0e-152
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60
           MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK
Sbjct: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180
           LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI
Sbjct: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 270
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269

[Close]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL
Match: A0A6J1G646 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451127 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.0e-152
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60
           MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK
Sbjct: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180
           LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI
Sbjct: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 270
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269

[Close]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL
Match: A0A6J1J6F4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483879 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.9e-148
Identity = 261/267 (97.75%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP +ASN+LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-SASNILGESRVTMRKTGGRPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL
Match: A0A5D3DVR3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00410 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 260/267 (97.38%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP  AS+LLGE R+TMRKTAG+PKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-TASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL
Match: A0A6J1FVQ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448911 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 260/267 (97.38%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP +AS++LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-SASDILGESRVTMRKTGGRPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. NCBI nr
Match: XP_022947180.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_022970674.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima] >KAG6604728.1 hypothetical protein SDJN03_02045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.1 bits (1411), Expect = 4.2e-152
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60
           MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK
Sbjct: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180
           LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI
Sbjct: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 270
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269

[Close]

BLAST of CmaCh02G000360 vs. NCBI nr
Match: XP_023534012.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.0 bits (1408), Expect = 9.3e-152
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVK 60
           MAAASSMALSSPSLAGQAVKLSPAAASNLLGE+RVTMRKTAGRPKPVSSGSPWYGPDRVK
Sbjct: 1   MAAASSMALSSPSLAGQAVKLSPAAASNLLGETRVTMRKTAGRPKPVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180
           LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI
Sbjct: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 270
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269

[Close]

BLAST of CmaCh02G000360 vs. NCBI nr
Match: XP_022986017.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 533.9 bits (1374), Expect = 8.1e-148
Identity = 261/267 (97.75%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP +ASN+LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-SASNILGESRVTMRKTGGRPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. NCBI nr
Match: KAG6570576.1 (hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147
Identity = 260/267 (97.38%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP +AS++LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-SASDILGESRVTMRKTGGRPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. NCBI nr
Match: XP_008456347.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0054604.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK27568.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147
Identity = 260/267 (97.38%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AASSMALSSPSLAGQAVKLSP  AS+LLGE R+TMRKTAG+PKPVSSGSPWYGPDRVKYL
Sbjct: 2   AASSMALSSPSLAGQAVKLSP-TASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 243 LENLADHLADPVNNNAWAFATNFVPGK 270
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 479.2 bits (1232), Expect = 2.2e-135
Identity = 238/268 (88.81%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AAS+MALSSP+ AG+AVKLSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYL
Sbjct: 2   AASTMALSSPAFAGKAVKLSP-AASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 181

Query: 183 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 182 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241

Query: 243 PLENLADHLADPVNNNAWAFATNFVPGK 270
           P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 477.2 bits (1227), Expect = 8.4e-135
Identity = 237/268 (88.43%), Postives = 249/268 (92.91%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AAS+MALSSP+ AG+AV LSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYL
Sbjct: 2   AASTMALSSPAFAGKAVNLSP-AASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 181

Query: 183 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 182 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241

Query: 243 PLENLADHLADPVNNNAWAFATNFVPGK 270
           P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 477.2 bits (1227), Expect = 8.4e-135
Identity = 237/268 (88.43%), Postives = 249/268 (92.91%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AAS+MALSSP+ AG+AV LSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYL
Sbjct: 2   AASTMALSSPAFAGKAVNLSP-AASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 181

Query: 183 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 182 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241

Query: 243 PLENLADHLADPVNNNAWAFATNFVPGK 270
           P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh02G000360 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 475.3 bits (1222), Expect = 3.2e-134
Identity = 236/268 (88.06%), Postives = 249/268 (92.91%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           A+S+MALSSP+ AG+AVK    AAS++LG  RVTMRKT  +PK   SGSPWYG DRVKYL
Sbjct: 2   ASSTMALSSPAFAGKAVK---PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 181

Query: 183 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 182 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241

Query: 243 PLENLADHLADPVNNNAWAFATNFVPGK 270
           PLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of CmaCh02G000360 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 474.6 bits (1220), Expect = 5.4e-134
Identity = 236/268 (88.06%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 3   AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 62
           AAS+MALSSP+L G+AVKLSP AAS + G  R+TMRK +    P  SGSPWYG DRVKYL
Sbjct: 2   AASTMALSSPALTGKAVKLSP-AASEVFGTGRITMRKASKPTGP--SGSPWYGSDRVKYL 61

Query: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 121

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 181

Query: 183 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 182 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241

Query: 243 PLENLADHLADPVNNNAWAFATNFVPGK 270
           PLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 242 PLENLADHLADPVNNNAWAFATNFVPGK 266

The following BLAST results are available for this feature:

BLAST of CmaCh02G000360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12333	2.4e-142	91.01	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1...	[more]
P27495	1.0e-140	90.26	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07369	1.7e-140	90.64	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27491	1.9e-139	89.10	Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum OX=4097 GN...	[more]
P09756	3.2e-139	91.45	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]

BLAST of CmaCh02G000360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6A9	2.0e-152	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1G646	2.0e-152	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J6F4	3.9e-148	97.75	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3DVR3	1.5e-147	97.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1FVQ6	1.5e-147	97.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CmaCh02G000360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947180.1	4.2e-152	100.00	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023534012.1	9.3e-152	99.63	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo...	[more]
XP_022986017.1	8.1e-148	97.75	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]
KAG6570576.1	3.1e-147	97.38	hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008456347.1	3.1e-147	97.38	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]

BLAST of CmaCh02G000360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29930.1	2.2e-135	88.81	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	8.4e-135	88.43	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	8.4e-135	88.43	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	3.2e-134	88.06	photosystem II light harvesting complex gene B1B2	[more]
AT2G34430.1	5.4e-134	88.06	light-harvesting chlorophyll-protein complex II subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 60..262 e-value: 9.9E-91 score: 305.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 69..235 e-value: 1.3E-49 score: 168.8
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 3..269
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 3..269
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 52..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G000360.1	CmaCh02G000360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding