CmUC10G192700 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAACACTAAATGCTATGCTGTTCACAGAGCAGGGAAAATCCTACGCCAATGGAAATTTCACACCCTCCGCTGCACCTTCCCGGTGGGTTTCCGCCCCCTGCGGCGGTTCATCAAGCGACTCGTTCACCCAATTTCAACCCCAACTCCAACTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCATTCAACGACACCCCCATTTTCCACCTGAAATTCCACAGCCGTCCGCGGTTCTCGTGCATAAACCCCAAGGTTGAGATCGATAGCGAGTTTGAGAGCCGTGTTGTTGATGACGATGGCGGTGAATGGGAGCGGCGGCGATTGGGCGCGTGTGATTATGAAAAAGAAGAAGAAGAGGAAGGAATTGATTTGAAAGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTCTCGTACTTGCGGTTGGATGAGCAGTGGAACCATGGGATTTGTTTTAGGACATAA ATGTTCAACACTAAATGCTATGCTGTTCACAGAGCAGGGAAAATCCTACGCCAATGGAAATTTCACACCCTCCGCTGCACCTTCCCGGTGGGTTTCCGCCCCCTGCGGCGGTTCATCAAGCGACTCGTTCACCCAATTTCAACCCCAACTCCAACTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCATTCAACGACACCCCCATTTTCCACCTGAAATTCCACAGCCGTCCGCGGTTCTCGTGCATAAACCCCAAGGTTGAGATCGATAGCGAGTTTGAGAGCCGTGTTGTTGATGACGATGGCGGTGAATGGGAGCGGCGGCGATTGGGCGCGTGTGATTATGAAAAAGAAGAAGAAGAGGAAGGAATTGATTTGAAAGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTCTCGTACTTGCGGTTGGATGAGCAGTGGAACCATGGGATTTGTTTTAGGACATAA ATGTTCAACACTAAATGCTATGCTGTTCACAGAGCAGGGAAAATCCTACGCCAATGGAAATTTCACACCCTCCGCTGCACCTTCCCGGTGGGTTTCCGCCCCCTGCGGCGGTTCATCAAGCGACTCGTTCACCCAATTTCAACCCCAACTCCAACTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCATTCAACGACACCCCCATTTTCCACCTGAAATTCCACAGCCGTCCGCGGTTCTCGTGCATAAACCCCAAGGTTGAGATCGATAGCGAGTTTGAGAGCCGTGTTGTTGATGACGATGGCGGTGAATGGGAGCGGCGGCGATTGGGCGCGTGTGATTATGAAAAAGAAGAAGAAGAGGAAGGAATTGATTTGAAAGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTCTCGTACTTGCGGTTGGATGAGCAGTGGAACCATGGGATTTGTTTTAGGACATAA MFNTKCYAVHRAGKILRQWKFHTLRCTFPVGFRPLRRFIKRLVHPISTPTPTPLPPHYAERQFSFNDTPIFHLKFHSRPRFSCINPKVEIDSEFESRVVDDDGGEWERRRLGACDYEKEEEEEGIDLKAEKFIKMFYEEMKMQSQVSYLRLDEQWNHGICFRT Homology
BLAST of CmUC10G192700 vs. NCBI nr
Match: XP_038906165.1 (uncharacterized protein LOC120092045 [Benincasa hispida]) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57 Identity = 127/171 (74.27%), Postives = 129/171 (75.44%), Query Frame = 0
BLAST of CmUC10G192700 vs. NCBI nr
Match: XP_011652950.1 (uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical protein Csa_014810 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 7.8e-45 Identity = 108/166 (65.06%), Postives = 118/166 (71.08%), Query Frame = 0
BLAST of CmUC10G192700 vs. NCBI nr
Match: XP_008454304.1 (PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >KAA0044406.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa] >TYK29533.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 157.5 bits (397), Expect = 9.6e-35 Identity = 95/159 (59.75%), Postives = 105/159 (66.04%), Query Frame = 0
BLAST of CmUC10G192700 vs. NCBI nr
Match: XP_022934217.1 (uncharacterized protein LOC111441455 [Cucurbita moschata]) HSP 1 Score: 134.4 bits (337), Expect = 8.7e-28 Identity = 84/154 (54.55%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CmUC10G192700 vs. NCBI nr
Match: KAG6581289.1 (hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018012.1 hypothetical protein SDJN02_19878, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.4 bits (337), Expect = 8.7e-28 Identity = 84/154 (54.55%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CmUC10G192700 vs. ExPASy TrEMBL
Match: A0A0A0KYA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.8e-45 Identity = 108/166 (65.06%), Postives = 118/166 (71.08%), Query Frame = 0
BLAST of CmUC10G192700 vs. ExPASy TrEMBL
Match: A0A5D3E0E5 (Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001360 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 4.6e-35 Identity = 95/159 (59.75%), Postives = 105/159 (66.04%), Query Frame = 0
BLAST of CmUC10G192700 vs. ExPASy TrEMBL
Match: A0A1S3BZI3 (neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=LOC103494743 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 4.6e-35 Identity = 95/159 (59.75%), Postives = 105/159 (66.04%), Query Frame = 0
BLAST of CmUC10G192700 vs. ExPASy TrEMBL
Match: A0A6J1F231 (uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC111441455 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28 Identity = 84/154 (54.55%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CmUC10G192700 vs. ExPASy TrEMBL
Match: A0A2C9WNB1 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G225600 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 6.3e-16 Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = 0
BLAST of CmUC10G192700 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14 Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 0
BLAST of CmUC10G192700 vs. TAIR 10
Match: AT4G02170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12 Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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