CmUC10G190400 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G190400
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Beta-galactosidase
Location	CmU531Chr10: 18017227 .. 18017798 (-)
RNA-Seq Expression	CmUC10G190400
Synteny	CmUC10G190400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGGGTCCATCACGAATTACCACTTCTTCAGGTAAGCGTTGGTTCGTTACCTTCATTGATGACCACACTCGCCTTACTTAGGTCTTCCTTTTAGTAGATAAGTCAGAGGTCTCATCTATTTTTCAACAGTTTTACACCACCATTGAAACTCAATTTAATGCCCAAATTGCAATCCTTCGAAGTGACAATGGTCGTGAATTCCTCACCAATACTCTTCGTGAGTTTTTATCCATTAAAGGTATTATTCACCAGAGTTCGTGTGCCTATACACCCCAACAAAATGGAGTGGCTGAAAGAAAAAACCGTCATCTTCTAGAAGTTGCTCAATCTCTCATGCTGTCAACCTCTCTTCTGTCTTACCTATGGGGGGATGCAGTCTTGACTGCCGCCTATCTTATAAATCGGATGTCTTCTCGGGTTCTTAACTTCCAAACTCCTCTTGACTACTTCAAACTCTCTTACCCTACCACTCGCCTTATACCTGATGTCCCTCTCCGTGTTTTTGGATGTACAATTTTTGTCGATAGCTTCGGCCCCAACCAAACTAAATTTACCCCTCGTGCCTAG

mRNA sequence

ATGTCTGGGGTCCATCACGAATTACCACTTCTTCAGTTTTACACCACCATTGAAACTCAATTTAATGCCCAAATTGCAATCCTTCGAAGTGACAATGGTCGTGAATTCCTCACCAATACTCTTCGTGAGTTTTTATCCATTAAAGGTATTATTCACCAGAGTTCGTGTGCCTATACACCCCAACAAAATGGAGTGGCTGAAAGAAAAAACCGTCATCTTCTAGAAGTTGCTCAATCTCTCATGCTGTCAACCTCTCTTCTGTCTTACCTATGGGGGGATGCAGTCTTGACTGCCGCCTATCTTATAAATCGGATGTCTTCTCGGGTTCTTAACTTCCAAACTCCTCTTGACTACTTCAAACTCTCTTACCCTACCACTCGCCTTATACCTGATGTCCCTCTCCGTGTTTTTGGATGTACAATTTTTGTCGATAGCTTCGGCCCCAACCAAACTAAATTTACCCCTCGTGCCTAG

Coding sequence (CDS)

ATGTCTGGGGTCCATCACGAATTACCACTTCTTCAGTTTTACACCACCATTGAAACTCAATTTAATGCCCAAATTGCAATCCTTCGAAGTGACAATGGTCGTGAATTCCTCACCAATACTCTTCGTGAGTTTTTATCCATTAAAGGTATTATTCACCAGAGTTCGTGTGCCTATACACCCCAACAAAATGGAGTGGCTGAAAGAAAAAACCGTCATCTTCTAGAAGTTGCTCAATCTCTCATGCTGTCAACCTCTCTTCTGTCTTACCTATGGGGGGATGCAGTCTTGACTGCCGCCTATCTTATAAATCGGATGTCTTCTCGGGTTCTTAACTTCCAAACTCCTCTTGACTACTTCAAACTCTCTTACCCTACCACTCGCCTTATACCTGATGTCCCTCTCCGTGTTTTTGGATGTACAATTTTTGTCGATAGCTTCGGCCCCAACCAAACTAAATTTACCCCTCGTGCCTAG

Protein sequence

MSGVHHELPLLQFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

Homology

[Close]

BLAST of CmUC10G190400 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 701 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 760

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 761 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 820

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 821 PLRVFGCTAYVHNFGPNQTKFTPRA 845

[Close]

BLAST of CmUC10G190400 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 759 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 818

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 819 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 878

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 879 PLRVFGCTAYVHNFGPNQTKFTPRA 903

[Close]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 95.5 bits (236), Expect = 5.7e-19
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           F    E  FN ++  L  DNGRE+L+N +R+F   KGI +  +  +TPQ NGV+ER  R 
Sbjct: 532 FVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRT 591

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL--NFQTPLDYFKLSYPTTRLIP 132
           + E A++++    L    WG+AVLTA YLINR+ SR L  + +TP + +    P  +   
Sbjct: 592 ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLK--- 651

Query: 133 DVPLRVFGCTIFV 144
              LRVFG T++V
Sbjct: 652 --HLRVFGATVYV 659

[Close]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-18
Identity = 52/146 (35.62%), Postives = 77/146 (52.74%), Query Frame = 0


Query: 12  QFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNR 71
           +F+  +E +   ++  LRSDNG E+ +    E+ S  GI H+ +   TPQ NGVAER NR
Sbjct: 531 KFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNR 590

Query: 72  HLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPD 131
            ++E  +S++    L    WG+AV TA YLINR  S  L F+ P   +     T + +  
Sbjct: 591 TIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVW-----TNKEVSY 650

Query: 132 VPLRVFGCTIFVDSFGPNQTKFTPRA 158
             L+VFGC  F       +TK   ++
Sbjct: 651 SHLKVFGCRAFAHVPKEQRTKLDDKS 671

[Close]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.6e-16
Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           F + +E +F  +I  L SDNG EF+   LR++LS  GI H +S  +TP+ NG++ERK+RH
Sbjct: 553 FKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRH 612

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           ++E+  +L+   S+    W  A   A YLINR+ + +L  Q+P        P        
Sbjct: 613 IVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE----- 672

Query: 133 PLRVFGCTIF 143
            L+VFGC  +
Sbjct: 673 KLKVFGCACY 675

[Close]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = 0


Query: 11  LQFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKN 70
           + F   +E +F  +I    SDNG EF+   L E+ S  GI H +S  +TP+ NG++ERK+
Sbjct: 572 ITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSERKH 631

Query: 71  RHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIP 130
           RH++E   +L+   S+    W  A   A YLINR+ + +L  ++P   F+  + T+   P
Sbjct: 632 RHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESP---FQKLFGTS---P 691

Query: 131 DV-PLRVFGCTIF 143
           +   LRVFGC  +
Sbjct: 692 NYDKLRVFGCACY 696

[Close]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot
Match: P47024 (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-06
Identity = 34/117 (29.06%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 17  IETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEV 76
           +ETQF+ ++  + SD G EF  + + E+   KGI H  +       NG AER  R ++  
Sbjct: 682 VETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITD 741

Query: 77  AQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDVP 134
           A +L+  ++L    W  AV +A  + N +  +    + PL        T RL+  +P
Sbjct: 742 ATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKSTG-KLPLKAISRQPVTVRLMSFLP 797

[Close]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
           FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 727 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 786

Query: 73  LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
           L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 787 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 846

Query: 133 PLRVFGCTIFVDSFGPNQTKFTPRA 158
           PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 847 PLRVFGCTAYVHNFGPNQTKFTPRA 871

[Close]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL
Match: A0A5A7V0Y9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00520 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 13   FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRH 72
            FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRH
Sbjct: 1002 FYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERKNRH 1061

Query: 73   LLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPLDYFKLSYPTTRLIPDV 132
            L+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ QTPLD  K SYP+TRL+ +V
Sbjct: 1062 LVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLVSEV 1121

Query: 133  PLRVFGCTIFVDSFGPNQTKFTPRA 158
            PLRVFGCT +V +FGPNQTKFTPRA
Sbjct: 1122 PLRVFGCTAYVHNFGPNQTKFTPRA 1146

The following BLAST results are available for this feature:

BLAST of CmUC10G190400 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	3.9e-57	76.55	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	3.9e-57	76.55	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	3.9e-57	76.55	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	3.9e-57	76.55	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	3.9e-57	76.55	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of CmUC10G190400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04146	5.7e-19	40.60	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	6.2e-18	35.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	7.6e-16	36.92	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.9e-14	36.09	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P47024	9.4e-06	29.06	Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	1.9e-57	76.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	1.9e-57	76.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	1.9e-57	76.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	1.9e-57	76.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5A7V0Y9	1.9e-57	76.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00...	[more]

BLAST of CmUC10G190400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 7..123 e-value: 4.5E-24 score: 87.1
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 12..107
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 12..107
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..123 score: 16.062651
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 11..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G190400.1	CmUC10G190400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding