CmUC10G186810 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G186810
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	F-box and associated interaction domains-containing protein
Location	CmU531Chr10: 5289290 .. 5289553 (-)
RNA-Seq Expression	CmUC10G186810
Synteny	CmUC10G186810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGCGGGAGCGTAGGTGGCAAGCTGTTATATGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGTCCTCGGGGGACTTCCCGATGACCGTACCAGGGAATTCTACCGTACTCCGTGCAGCTATTGTTGTTGTTCCTGCAAAGCCTACCCAAAGGTTCAGGCCGGATTGTAGGAAGTGGTATACGTTTTTGTATTTCTATGAGAAGCTCTACGGCACCCACGATTCCCAGTAG

mRNA sequence

ATGGATGGCGGGAGCGTAGGTGGCAAGCTGTTATATGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGTCCTCGGGGGACTTCCCGATGACCGTACCAGGGAATTCTACCGTACTCCGTGCAGCTATTGTTGTTGTTCCTGCAAAGCCTACCCAAAGGTTCAGGCCGGATTGTAGGAAGTGGTATACGTTTTTGTATTTCTATGAGAAGCTCTACGGCACCCACGATTCCCAGTAG

Coding sequence (CDS)

ATGGATGGCGGGAGCGTAGGTGGCAAGCTGTTATATGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGTCCTCGGGGGACTTCCCGATGACCGTACCAGGGAATTCTACCGTACTCCGTGCAGCTATTGTTGTTGTTCCTGCAAAGCCTACCCAAAGGTTCAGGCCGGATTGTAGGAAGTGGTATACGTTTTTGTATTTCTATGAGAAGCTCTACGGCACCCACGATTCCCAGTAG

Protein sequence

MDGGSVGGKLLYGYGALPVDASPALARIVWESSSGDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKWYTFLYFYEKLYGTHDSQ

Homology

[Close]

BLAST of CmUC10G186810 vs. NCBI nr
Match: KYP33257.1 (hypothetical protein KK1_045903 [Cajanus cajan])

HSP 1 Score: 67.0 bits (162), Expect = 9.1e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. NCBI nr
Match: KYP46949.1 (hypothetical protein KK1_031431 [Cajanus cajan])

HSP 1 Score: 67.0 bits (162), Expect = 9.1e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. NCBI nr
Match: KAE8681803.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 67.0 bits (162), Expect = 9.1e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. NCBI nr
Match: YP_009430362.1 (orf151 [Bupleurum falcatum] >ARR27494.1 orf151 [Bupleurum falcatum])

HSP 1 Score: 67.0 bits (162), Expect = 9.1e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35  GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
           G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 90  GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 125

[Close]

BLAST of CmUC10G186810 vs. NCBI nr
Match: RDY14781.1 (hypothetical protein CR513_00081, partial [Mucuna pruriens])

HSP 1 Score: 67.0 bits (162), Expect = 9.1e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35  GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
           G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 90  GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 125

[Close]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL
Match: A0A151QSH3 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_045903 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL
Match: A0A151RWM0 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_031431 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL
Match: A0A6A2YR19 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111308pilonHSYRG00021 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35 GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
          G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 34 GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 69

[Close]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL
Match: A0A371II96 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00081 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35  GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
           G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 90  GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 125

[Close]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL
Match: A0A385G2B7 (Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp24 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 35  GDFPMTVPGNSTVLRAAIVVVPAKPTQRFRPDCRKW 71
           G   MTVPGNSTVLRAAIVV PA+PTQRFRPDCRKW
Sbjct: 90  GTSRMTVPGNSTVLRAAIVVDPAEPTQRFRPDCRKW 125

The following BLAST results are available for this feature:

BLAST of CmUC10G186810 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP33257.1	9.1e-08	86.11	hypothetical protein KK1_045903 [Cajanus cajan]	[more]
KYP46949.1	9.1e-08	86.11	hypothetical protein KK1_031431 [Cajanus cajan]	[more]
KAE8681803.1	9.1e-08	86.11	Detected protein of unknown function [Hibiscus syriacus]	[more]
YP_009430362.1	9.1e-08	86.11	orf151 [Bupleurum falcatum] >ARR27494.1 orf151 [Bupleurum falcatum]	[more]
RDY14781.1	9.1e-08	86.11	hypothetical protein CR513_00081, partial [Mucuna pruriens]	[more]

BLAST of CmUC10G186810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC10G186810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151QSH3	4.4e-08	86.11	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_045903 PE=4 SV=1	[more]
A0A151RWM0	4.4e-08	86.11	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_031431 PE=4 SV=1	[more]
A0A6A2YR19	4.4e-08	86.11	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111308pilon...	[more]
A0A371II96	4.4e-08	86.11	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00081 P...	[more]
A0A385G2B7	4.4e-08	86.11	Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp24 PE=4 S...	[more]

BLAST of CmUC10G186810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G186810.1	CmUC10G186810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion