CmUC09G172960 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G172960
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	WD repeat-containing protein RUP2-like
Location	CmU531Chr09: 16353973 .. 16355106 (+)
RNA-Seq Expression	CmUC09G172960
Synteny	CmUC09G172960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGCCTTTCCACTCCCAATTCCCCAACCCCACAAAACCAAAACCCAGAAAAATATATTCACAAATTACAAGAAAATGAAACGACGCCGCGTCGTTGTGAGTGGGATTTCACTCTCGCCGCCGTCGTCTCCTCCTCCGCCATTGGCGCCGCTTCCGACACGCTCGGGGTTGTCGAATTCGACCCTTCCGATTCACTCATCGCCACCGCCGGAATCGCCAGAAAAATCCGTGGCTACCGTCTTCATAATCTCTTACCGGAGAACATTCATAACGGTTCCGTTACTCAATTAGACCACACCCGTGCTTCTGAATTCTGTATCTGTACTCCGGCGAAACTCAGTAGCCTCCGCTGGAAGCCCGGTGTTAACGGCCGGATCTTAGGCTCCGGCGATTACGATGGGGTTGTGATGGAGTATGATCTCGAAATGAAGGTACCGATTTTCGAACGCGATGAACACGGCGGGCGGCGTGTGTGGAGTGTGGATTACTCAACGGTAGAACCTGTCGTGGGTGCGTCGGGGTCCGACGACGGCACAGTGCAAGTATGGGACACGCGCTGTGACGGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGATAAGGAGTCCAGTTTGTTGCGTGGAATTCAACCCGTACGGCAGCGCGTTGGTGGCGGTTGGATGCGCGGACCGAAAAGCGTACGGGTACGACCGGCGGAAAATGAGGGAACCGGTTGTGGTATTTGAAGGTCACGCGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTATCGGCGAGTACGGACGGGAGTTTGAAGATGTGGAGGACGGAGGAGGGTGGTGGGGCACGTGTGACGCGCACGTACGAAGGGCACGTGAATGGGAGGAGCTTTGTGGGGCTATCAGTATGGAGGAACGGGGGTTTAATCGGGTGCGGGTCGGAGGATAAGAGGGTTTTCGTGTACGACAAGAGATGGGGAGAGCCGATATGGGTAAAGGAATTTGATGGAGTCGGGTCGGGTTACGGGTTGGTGAGTAGTGTTTGTTGGAGGCAAGTGGGAGAGGATGAATGTACGTTAGTGGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGAGCGAAGAGGTCGTTTTGA

mRNA sequence

ATGAAAAGCCTTTCCACTCCCAATTCCCCAACCCCACAAAACCAAAACCCAGAAAAATATATTCACAAATTACAAGAAAATGAAACGACGCCGCGTCGTTGTGAGTGGGATTTCACTCTCGCCGCCGTCGTCTCCTCCTCCGCCATTGGCGCCGCTTCCGACACGCTCGGGGTTGTCGAATTCGACCCTTCCGATTCACTCATCGCCACCGCCGGAATCGCCAGAAAAATCCGTGGCTACCGTCTTCATAATCTCTTACCGGAGAACATTCATAACGGTTCCGTTACTCAATTAGACCACACCCGTGCTTCTGAATTCTGTATCTGTACTCCGGCGAAACTCAGTAGCCTCCGCTGGAAGCCCGGTGTTAACGGCCGGATCTTAGGCTCCGGCGATTACGATGGGGTTGTGATGGAGTATGATCTCGAAATGAAGGTACCGATTTTCGAACGCGATGAACACGGCGGGCGGCGTGTGTGGAGTGTGGATTACTCAACGGTAGAACCTGTCGTGGGTGCGTCGGGGTCCGACGACGGCACAGTGCAAGTATGGGACACGCGCTGTGACGGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGATAAGGAGTCCAGTTTGTTGCGTGGAATTCAACCCGTACGGCAGCGCGTTGGTGGCGGTTGGATGCGCGGACCGAAAAGCGTACGGGTACGACCGGCGGAAAATGAGGGAACCGGTTGTGGTATTTGAAGGTCACGCGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTATCGGCGAGTACGGACGGGAGTTTGAAGATGTGGAGGACGGAGGAGGGTGGTGGGGCACGTGTGACGCGCACGTACGAAGGGCACGTGAATGGGAGGAGCTTTGTGGGGCTATCAGTATGGAGGAACGGGGGTTTAATCGGGTGCGGGTCGGAGGATAAGAGGGTTTTCGTGTACGACAAGAGATGGGGAGAGCCGATATGGGTAAAGGAATTTGATGGAGTCGGGTCGGGTTACGGGTTGGTGAGTAGTGTTTGTTGGAGGCAAGTGGGAGAGGATGAATGTACGTTAGTGGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGAGCGAAGAGGTCGTTTTGA

Coding sequence (CDS)

ATGAAAAGCCTTTCCACTCCCAATTCCCCAACCCCACAAAACCAAAACCCAGAAAAATATATTCACAAATTACAAGAAAATGAAACGACGCCGCGTCGTTGTGAGTGGGATTTCACTCTCGCCGCCGTCGTCTCCTCCTCCGCCATTGGCGCCGCTTCCGACACGCTCGGGGTTGTCGAATTCGACCCTTCCGATTCACTCATCGCCACCGCCGGAATCGCCAGAAAAATCCGTGGCTACCGTCTTCATAATCTCTTACCGGAGAACATTCATAACGGTTCCGTTACTCAATTAGACCACACCCGTGCTTCTGAATTCTGTATCTGTACTCCGGCGAAACTCAGTAGCCTCCGCTGGAAGCCCGGTGTTAACGGCCGGATCTTAGGCTCCGGCGATTACGATGGGGTTGTGATGGAGTATGATCTCGAAATGAAGGTACCGATTTTCGAACGCGATGAACACGGCGGGCGGCGTGTGTGGAGTGTGGATTACTCAACGGTAGAACCTGTCGTGGGTGCGTCGGGGTCCGACGACGGCACAGTGCAAGTATGGGACACGCGCTGTGACGGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGATAAGGAGTCCAGTTTGTTGCGTGGAATTCAACCCGTACGGCAGCGCGTTGGTGGCGGTTGGATGCGCGGACCGAAAAGCGTACGGGTACGACCGGCGGAAAATGAGGGAACCGGTTGTGGTATTTGAAGGTCACGCGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTATCGGCGAGTACGGACGGGAGTTTGAAGATGTGGAGGACGGAGGAGGGTGGTGGGGCACGTGTGACGCGCACGTACGAAGGGCACGTGAATGGGAGGAGCTTTGTGGGGCTATCAGTATGGAGGAACGGGGGTTTAATCGGGTGCGGGTCGGAGGATAAGAGGGTTTTCGTGTACGACAAGAGATGGGGAGAGCCGATATGGGTAAAGGAATTTGATGGAGTCGGGTCGGGTTACGGGTTGGTGAGTAGTGTTTGTTGGAGGCAAGTGGGAGAGGATGAATGTACGTTAGTGGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGAGCGAAGAGGTCGTTTTGA

Protein sequence

MKSLSTPNSPTPQNQNPEKYIHKLQENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVGAKRSF

Homology

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BLAST of CmUC09G172960 vs. NCBI nr
Match: XP_038887335.1 (WD repeat-containing protein RUP2-like [Benincasa hispida])

HSP 1 Score: 719.2 bits (1855), Expect = 1.9e-203
Identity = 351/379 (92.61%), Postives = 360/379 (94.99%), Query Frame = 0


Query: 1   MKSLSTPNSPTPQNQNPEKYIH-KLQENETTPRRCEWDFTLAAVV-SSSAIGAASDTLGV 60
           MKSL TPNS  PQNQNPEK +H KLQ+NETTP RCEWDFTLAA+V SSSAIGAASDTLGV
Sbjct: 1   MKSLCTPNS--PQNQNPEKQLHNKLQQNETTPPRCEWDFTLAALVSSSSAIGAASDTLGV 60

Query: 61  VEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGSVTQLDHTRASEFCICTPAKLSSLR 120
           VEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNG++ QLDH+RASEFCICTPAKLSSLR
Sbjct: 61  VEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGTINQLDHSRASEFCICTPAKLSSLR 120

Query: 121 WKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180
           WKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYS V+PVVGASGSDD
Sbjct: 121 WKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSMVDPVVGASGSDD 180

Query: 181 GTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMRE 240
           GTVQVWDTRCDGGECVAVVQPSV+RSPVCCVEFNPYG ALVAVGCADRKAYGYDRRKMRE
Sbjct: 181 GTVQVWDTRCDGGECVAVVQPSVVRSPVCCVEFNPYGGALVAVGCADRKAYGYDRRKMRE 240

Query: 241 PVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVG 300
           PVVVFEGH KTVTYVKFVDGGTVVSASTDGSLKMW+TEE   ARV RTYEGHVNGRSFVG
Sbjct: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE---ARVVRTYEGHVNGRSFVG 300

Query: 301 LSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTL 360
           LSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD VGSGYGLVSSVCWRQVGE ECTL
Sbjct: 301 LSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDRVGSGYGLVSSVCWRQVGEHECTL 360

Query: 361 VAGGSDGVLQVFVGAKRSF 378
           VAGGSDGVLQVFVG KR F
Sbjct: 361 VAGGSDGVLQVFVGQKRLF 374

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BLAST of CmUC09G172960 vs. NCBI nr
Match: XP_004148378.3 (LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus])

HSP 1 Score: 678.7 bits (1750), Expect = 2.9e-191
Identity = 334/386 (86.53%), Postives = 348/386 (90.16%), Query Frame = 0


Query: 3   SLSTPNSPTPQNQNPEKYIHKLQENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVEFD 62
           SLS+P+SPTPQ QN E    KL +   TP RCEWDFTLA+VVSS    AASDTLGVVEFD
Sbjct: 4   SLSSPSSPTPQIQNSE----KLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFD 63

Query: 63  PSDSLIATAGIARKIRGYRLHNLLPENI-HNGSVTQLDHTRASEFCICTPAKLSSLRWKP 122
           PSDSLIATAGIARKIRGYRLHNLLP++I HN ++TQLDHTRAS+FCICTPAKLSSLRWKP
Sbjct: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123

Query: 123 GVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 182
             NGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV
Sbjct: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183

Query: 183 QVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVV 242
           QVWDTRC+ GECVAVVQPSV+RS VCCVEFNP+G  LVAVGCADRKAYGYDRRKMREPVV
Sbjct: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243

Query: 243 VFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSV 302
           VFEGH KTVTYVKFVDGGTVVSASTDGSLKMW+TEEGGGARV RTYEGHVNGRSFVGLSV
Sbjct: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303

Query: 303 WRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD---------GVGSGYGLVSSVCWRQVG 362
           WR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD         G+GSGYGLVSSVCWRQVG
Sbjct: 304 WRXGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVG 363

Query: 363 EDECTLVAGGSDGVLQVFVG-AKRSF 378
           E ECTLVAGGSDGVLQVFVG  KRSF
Sbjct: 364 EQECTLVAGGSDGVLQVFVGHKKRSF 385

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BLAST of CmUC09G172960 vs. NCBI nr
Match: KAA0038490.1 (WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 2.9e-191
Identity = 330/381 (86.61%), Postives = 349/381 (91.60%), Query Frame = 0


Query: 1   MKSLSTPNSPTPQNQNPEKYIHKLQENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVE 60
           M+S+S+P+SPTPQNQNPEK        + +P  CEWDFTLA+VVSS    AASDTLGV+E
Sbjct: 1   MRSVSSPSSPTPQNQNPEKL------KQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLE 60

Query: 61  FDPSDSLIATAGIARKIRGYRLHNLLPENIHNG--SVTQLDHTRASEFCICTPAKLSSLR 120
           FDPSDSLIATAGIARKIRGYRLHNLLP++IH+   ++TQLDH+RAS+FCICTPAKLSSLR
Sbjct: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLR 120

Query: 121 WKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180
           WKP  N RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD
Sbjct: 121 WKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180

Query: 181 GTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMRE 240
           GTVQVWDTRC+ GECVAVVQPSV+RSPVCCVEFNPYG  LVAVGCADRKAYGYDRRKMRE
Sbjct: 181 GTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMRE 240

Query: 241 PVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVG 300
           PVVVFEGH KTVTYVKFVDGGTVVSASTDGSLKMW+TEEGGGARV RTYEGHVNGRSFVG
Sbjct: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300

Query: 301 LSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD-GVGSGYGLVSSVCWRQVGEDECT 360
           LSVWR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD G+GSGYGLVSSVCWRQVGE ECT
Sbjct: 301 LSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECT 360

Query: 361 LVAGGSDGVLQVFVG-AKRSF 378
           LVAGGSDGVLQVFVG  KRSF
Sbjct: 361 LVAGGSDGVLQVFVGHKKRSF 375

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BLAST of CmUC09G172960 vs. NCBI nr
Match: XP_022952662.1 (WD repeat-containing protein RUP2-like [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 6.2e-178
Identity = 308/357 (86.27%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 27  NETTPRRCEWDFTLAAVVSSSA-IGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNL 86
           NE+TP R EW F+LA+VVSSS+ IG ASDTLGVVEFDPSDSLIATAGIARKIRGY L NL
Sbjct: 3   NESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNL 62

Query: 87  LPENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMK 146
           LP   H+G+V  LDH+RASEFCICTPAKLSSLRWKPG  GRILGSGDYDGVVMEYDLE K
Sbjct: 63  LP---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKK 122

Query: 147 VPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSP 206
           VP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRCDG +CVAVVQPSV+RSP
Sbjct: 123 VPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSP 182

Query: 207 VCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSAS 266
           VCCVEFNPYG ALV VGCADRKAYGYDRRKM E V+VFEGHAKTVTYVKFVDGGT+VSAS
Sbjct: 183 VCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAS 242

Query: 267 TDGSLKMWRTEE----GGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 326
           TDGSLKMW+ EE    GGGARV RTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD
Sbjct: 243 TDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 302

Query: 327 KRWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVG-AKRSF 378
           KRWGE +WV+EFD VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVL+VFVG  KRSF
Sbjct: 303 KRWGEAVWVEEFDRVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

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BLAST of CmUC09G172960 vs. NCBI nr
Match: KAG6571808.1 (WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011503.1 WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 630.6 bits (1625), Expect = 8.9e-177
Identity = 306/357 (85.71%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 27  NETTPRRCEWDFTLAAVVSSSA-IGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNL 86
           NE+TP R EW F+LA+VVSSS+ IG ASDTLGVVEFDPSDSLIATAGIARKIRGY L NL
Sbjct: 3   NESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNL 62

Query: 87  LPENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMK 146
           LP   ++G+V  LDH+RASEFCICTPAKLSSLRWKPG  GRILGSGDYDGVVMEYDLE K
Sbjct: 63  LP---NDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKK 122

Query: 147 VPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSP 206
           VP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRCDG +CVAVVQPS++RSP
Sbjct: 123 VPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSP 182

Query: 207 VCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSAS 266
           VCCVEFNPYG ALV VGCADRKAYGYDRRKM E V+VFEGHAKTVTYVKFVDGGT+VSAS
Sbjct: 183 VCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAS 242

Query: 267 TDGSLKMWRTEE----GGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 326
           TDGSLKMW+ EE    GGGARV RTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD
Sbjct: 243 TDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 302

Query: 327 KRWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVGAK-RSF 378
           KRWGE +WV+EFD VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVL+VFVG K RSF
Sbjct: 303 KRWGEAVWVEEFDRVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKTRSF 356

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BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot
Match: Q9FFA7 (WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.5e-129
Identity = 227/365 (62.19%), Postives = 278/365 (76.16%), Query Frame = 0


Query: 22  HKLQENETTPR---RCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIR 81
           HK Q+ +   +   R EWD +L+ VVSSS+  +ASD +G +EFDP+D+++ATAGI+RKIR
Sbjct: 7   HKQQQEQAQQQEEARYEWDLSLSTVVSSSS-SSASDVIGAIEFDPTDNIVATAGISRKIR 66

Query: 82  GYRLHNLLPENIHNGS-VTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVV 141
            Y L +LL  N  +G+ V+ +D   A E+ ICTPAKLSSLRW+PG  GR++GSGDYDGVV
Sbjct: 67  FYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDGVV 126

Query: 142 MEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCDGGECVA 201
           MEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E V 
Sbjct: 127 MEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVG 186

Query: 202 VVQPS-VIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVK 261
           VV+P+ + RS VCCVEF+P G   VAVGCADRK Y YD RK+ +P +  +GH KTV+YV+
Sbjct: 187 VVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVR 246

Query: 262 FVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSED 321
           F+DGGTVV+A TDG LK+W  E+G   RV RTYEGHVN R+FVGLSVWRNG L GCGSE+
Sbjct: 247 FLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCGSEN 306

Query: 322 KRVFVYDKRWGEPIWVKEFDGVGSGYG----LVSSVCWRQVGEDECTLVAGGSDGVLQVF 376
            RVFVYD+RWG+P+WV  F+ VG   G     VSSVCWRQ G D+CTLVAGGSDGVLQV+
Sbjct: 307 NRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVY 366

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BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot
Match: Q9LTJ6 (WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.7e-112
Identity = 200/344 (58.14%), Postives = 253/344 (73.55%), Query Frame = 0


Query: 33  RCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHN 92
           RC+WD +L+AVVSS++ G  SD +G +EFDP+  +IAT GIARKIR YRL +LL      
Sbjct: 53  RCDWDLSLSAVVSSASTG--SDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLLE----- 112

Query: 93  GSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERD 152
              ++ DH  ASE  ICTPAKLSSL+W+P  +GR++GSGDYDGVV EYD+E +VP+ ERD
Sbjct: 113 ---SRDDHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERD 172

Query: 153 EHGGRRVWSVDYSTVE-PVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEF 212
           EHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R +GG     V+P    + +C VEF
Sbjct: 173 EHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGG-GAAICSVEF 232

Query: 213 NPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLK 272
           +P+G + +AVGCADR AY YD R++ +P++V +GH KTVTY +F+D  T+V+ STDGSLK
Sbjct: 233 DPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLK 292

Query: 273 MWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWV- 332
            W  +   G RV RTY GHVN R+FVGLSVWR+GGL+  GSE+ +VFVYDKRW EP+WV 
Sbjct: 293 QWDID--NGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVC 352

Query: 333 --KEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVG 373
                +  GS    VSSVC RQV ED CTLVAGGSDG L++F G
Sbjct: 353 GLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSG 382

[Close]

BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 112/327 (34.25%), Postives = 173/327 (52.91%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGSVTQLDHTRASEFCICTP 111
           +++ +  +EFD  D L ATAG++R I+ +   ++         V +    +     + T 
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSV---------VNEPADMQCPIVEMSTR 429

Query: 112 AKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVV 171
           +KLS L W       I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP +
Sbjct: 430 SKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPSM 489

Query: 172 GASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGY 231
             SGSDD  V+VW TR +     A V    +++ +CCV++NP  S  +AVG AD   + Y
Sbjct: 490 LVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYY 549

Query: 232 DRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHV 291
           D R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++       RT+ GH 
Sbjct: 550 DLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGHT 609

Query: 292 NGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVG-------SGYGLVS 351
           N ++FVGL+V  N   + CGSE   V+VY K    P+    F           +G   +S
Sbjct: 610 NEKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFIS 669

Query: 352 SVCWRQVGEDECTLVAGGSDGVLQVFV 372
           +VCW+    D  T++   S G ++V V
Sbjct: 670 AVCWK---SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.9e-47
Identity = 119/331 (35.95%), Postives = 179/331 (54.08%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPEN--IHNGSVTQLDHTRASEFCIC 111
           +S+ +  + FD    L ATAG+ +KI+ +  ++++ +N  IH   V            + 
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVE-----------LA 592

Query: 112 TPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEP 171
             +KLSSL W   +  +I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ +P
Sbjct: 593 GRSKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADP 652

Query: 172 VVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAY 231
            + ASGSDDGTV++W    + G  +  ++    ++ VCCV+F       +A G AD K Y
Sbjct: 653 TLLASGSDDGTVKLWS--INQGVSIGTIK---TKANVCCVQFPSDSGRSLAFGSADHKVY 712

Query: 232 GYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMW---RTEEGGGARVTRT 291
            YD R  + P+    GH+KTV+YVKFVD  T+VS+STD +LK+W    +  G       +
Sbjct: 713 YYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHS 772

Query: 292 YEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVGSGYGL---- 351
           + GH N ++FVGLSV  + G I  GSE   VFVY K +  P+    F+   S  GL    
Sbjct: 773 FTGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDD 832

Query: 352 ----VSSVCWRQVGEDECTLVAGGSDGVLQV 370
               +SS+CWR       TLVA  S+G +++
Sbjct: 833 ASQFISSICWR---GQSSTLVAANSNGNIKI 840

[Close]

BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-46
Identity = 112/329 (34.04%), Postives = 173/329 (52.58%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLL--PENIHNGSVTQLDHTRASEFCIC 111
           +++ +  +EFD  D L ATAG++R+I+ +    ++  P + H   V            + 
Sbjct: 367 SANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVE-----------MT 426

Query: 112 TPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEP 171
           T +KLS L W      +I  S DY+G+V  + +  +  + E +EH  +R WSVD+S  +P
Sbjct: 427 TRSKLSCLSWNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEH-EKRAWSVDFSRTDP 486

Query: 172 VVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAY 231
            +  SGSDD  V+VW T  +     A V    +++ +CCV++NP     +AVG AD   +
Sbjct: 487 SMLVSGSDDCKVKVWCTNQE-----ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIH 546

Query: 232 GYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEG 291
            YD R +  PV VF GH K V+YVKF+    + SASTD +L++W  ++       RT+ G
Sbjct: 547 YYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQN---LPVRTFRG 606

Query: 292 HVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVG-------SGYGL 351
           H N ++FVGL+V      I CGSE   VFVY K   +P+    F  +        +G   
Sbjct: 607 HANEKNFVGLTV--RSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYF 666

Query: 352 VSSVCWRQVGEDECTLVAGGSDGVLQVFV 372
           +S+VCW+    D  T++   S G ++V V
Sbjct: 667 ISAVCWK---SDRPTILTANSQGTIKVLV 669

[Close]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL
Match: A0A0A0LHK2 (Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 334/386 (86.53%), Postives = 348/386 (90.16%), Query Frame = 0


Query: 3   SLSTPNSPTPQNQNPEKYIHKLQENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVEFD 62
           SLS+P+SPTPQ QN E    KL +   TP RCEWDFTLA+VVSS    AASDTLGVVEFD
Sbjct: 4   SLSSPSSPTPQIQNSE----KLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFD 63

Query: 63  PSDSLIATAGIARKIRGYRLHNLLPENI-HNGSVTQLDHTRASEFCICTPAKLSSLRWKP 122
           PSDSLIATAGIARKIRGYRLHNLLP++I HN ++TQLDHTRAS+FCICTPAKLSSLRWKP
Sbjct: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123

Query: 123 GVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 182
             NGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV
Sbjct: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183

Query: 183 QVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVV 242
           QVWDTRC+ GECVAVVQPSV+RS VCCVEFNP+G  LVAVGCADRKAYGYDRRKMREPVV
Sbjct: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243

Query: 243 VFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSV 302
           VFEGH KTVTYVKFVDGGTVVSASTDGSLKMW+TEEGGGARV RTYEGHVNGRSFVGLSV
Sbjct: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303

Query: 303 WRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD---------GVGSGYGLVSSVCWRQVG 362
           WR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD         G+GSGYGLVSSVCWRQVG
Sbjct: 304 WREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVG 363

Query: 363 EDECTLVAGGSDGVLQVFVG-AKRSF 378
           E ECTLVAGGSDGVLQVFVG  KRSF
Sbjct: 364 EQECTLVAGGSDGVLQVFVGHKKRSF 385

[Close]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL
Match: A0A5A7T553 (WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00140 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.4e-191
Identity = 330/381 (86.61%), Postives = 349/381 (91.60%), Query Frame = 0


Query: 1   MKSLSTPNSPTPQNQNPEKYIHKLQENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVE 60
           M+S+S+P+SPTPQNQNPEK        + +P  CEWDFTLA+VVSS    AASDTLGV+E
Sbjct: 1   MRSVSSPSSPTPQNQNPEKL------KQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLE 60

Query: 61  FDPSDSLIATAGIARKIRGYRLHNLLPENIHNG--SVTQLDHTRASEFCICTPAKLSSLR 120
           FDPSDSLIATAGIARKIRGYRLHNLLP++IH+   ++TQLDH+RAS+FCICTPAKLSSLR
Sbjct: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLR 120

Query: 121 WKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180
           WKP  N RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD
Sbjct: 121 WKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180

Query: 181 GTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMRE 240
           GTVQVWDTRC+ GECVAVVQPSV+RSPVCCVEFNPYG  LVAVGCADRKAYGYDRRKMRE
Sbjct: 181 GTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMRE 240

Query: 241 PVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVG 300
           PVVVFEGH KTVTYVKFVDGGTVVSASTDGSLKMW+TEEGGGARV RTYEGHVNGRSFVG
Sbjct: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300

Query: 301 LSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD-GVGSGYGLVSSVCWRQVGEDECT 360
           LSVWR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD G+GSGYGLVSSVCWRQVGE ECT
Sbjct: 301 LSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECT 360

Query: 361 LVAGGSDGVLQVFVG-AKRSF 378
           LVAGGSDGVLQVFVG  KRSF
Sbjct: 361 LVAGGSDGVLQVFVGHKKRSF 375

[Close]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL
Match: A0A6J1GKZ5 (WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC111455289 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.0e-178
Identity = 308/357 (86.27%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 27  NETTPRRCEWDFTLAAVVSSSA-IGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNL 86
           NE+TP R EW F+LA+VVSSS+ IG ASDTLGVVEFDPSDSLIATAGIARKIRGY L NL
Sbjct: 3   NESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNL 62

Query: 87  LPENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMK 146
           LP   H+G+V  LDH+RASEFCICTPAKLSSLRWKPG  GRILGSGDYDGVVMEYDLE K
Sbjct: 63  LP---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKK 122

Query: 147 VPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSP 206
           VP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRCDG +CVAVVQPSV+RSP
Sbjct: 123 VPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSP 182

Query: 207 VCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSAS 266
           VCCVEFNPYG ALV VGCADRKAYGYDRRKM E V+VFEGHAKTVTYVKFVDGGT+VSAS
Sbjct: 183 VCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAS 242

Query: 267 TDGSLKMWRTEE----GGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 326
           TDGSLKMW+ EE    GGGARV RTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD
Sbjct: 243 TDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 302

Query: 327 KRWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVG-AKRSF 378
           KRWGE +WV+EFD VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVL+VFVG  KRSF
Sbjct: 303 KRWGEAVWVEEFDRVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

[Close]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL
Match: A0A6J1I327 (WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470535 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 6.2e-176
Identity = 305/356 (85.67%), Postives = 324/356 (91.01%), Query Frame = 0


Query: 27  NETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLL 86
           NE TP R EW F+LA+VVSSS IG ASDTLGVVEFDPSDSLIATAGIARKIRGY L +LL
Sbjct: 3   NEPTPLRREWSFSLASVVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLL 62

Query: 87  PENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKV 146
           P   H+G+V  LDH+RA EFCICTPAKLSSLRWKPG  GRILGSGDYDGVVMEYDLE KV
Sbjct: 63  P---HDGTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKKV 122

Query: 147 PIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPV 206
           P+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRCDG +CVAVVQPS++RSPV
Sbjct: 123 PVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPV 182

Query: 207 CCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSAST 266
           CCVEFNPYG ALV VGCADRKAYGYDRRKM E V+VFEGHAKTVTYVKFVDGGT+VSAST
Sbjct: 183 CCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAST 242

Query: 267 DGSLKMWRTEEG--GGAR--VTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDK 326
           DGSLKMW+ EEG  GGAR  V RTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDK
Sbjct: 243 DGSLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDK 302

Query: 327 RWGEPIWVKEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVG-AKRSF 378
           RWGE +WV+EFD VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVL+VFVG  KRSF
Sbjct: 303 RWGEAVWVEEFDRVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 355

[Close]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL
Match: A0A5N6QZY3 (WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_008312 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.7e-146
Identity = 250/354 (70.62%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 26  ENETTPRRCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNL 85
           ++E    RCEWDF L+ +VSS   GA +DTLGV+EFDPSDS +AT GIARKIR Y L +L
Sbjct: 45  DDEEERARCEWDFNLSTIVSSDTAGAGTDTLGVIEFDPSDSFVATGGIARKIRFYSLSSL 104

Query: 86  LP-ENIHNGSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEM 145
           L  E+ +N S T LDH  A +FCICTPAKLSSL+WKPG +GRILGSGDYDGVVMEYDLE 
Sbjct: 105 LAHESSNNNSTTSLDHAGACDFCICTPAKLSSLKWKPGSDGRILGSGDYDGVVMEYDLER 164

Query: 146 KVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRS 205
           ++P+FERDEHGGRRVWSVDYS  +PV+GASGSDDGT+Q+WD RC+GG+CVA VQPS  RS
Sbjct: 165 RIPVFERDEHGGRRVWSVDYSRWDPVMGASGSDDGTMQMWDPRCEGGKCVATVQPSARRS 224

Query: 206 PVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSA 265
           PVCCVEFNP G ALVAVGCADR+AY YD RKM +PVVVF+GH KTVTYV+F+D  T+VSA
Sbjct: 225 PVCCVEFNPVGGALVAVGCADRRAYVYDIRKMVDPVVVFDGHDKTVTYVRFLDAHTMVSA 284

Query: 266 STDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRW 325
            TDG L  W   E   ARV RTY+GHVN RSFVGLSVWRNGGL+GCGSE   VFVYD+RW
Sbjct: 285 GTDGCLNTWSINE---ARVIRTYKGHVNNRSFVGLSVWRNGGLLGCGSESNEVFVYDRRW 344

Query: 326 GEPIWVKEFDGV---GSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVGAKR 376
            EPIWV  F+ V   G   G VSSVCWRQ+ ED CTLVAGGSDGVLQVFVG ++
Sbjct: 345 SEPIWVHGFEPVTRSGCDQGFVSSVCWRQIEEDRCTLVAGGSDGVLQVFVGKRK 395

[Close]

BLAST of CmUC09G172960 vs. TAIR 10
Match: AT5G23730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 463.4 bits (1191), Expect = 1.8e-130
Identity = 227/365 (62.19%), Postives = 278/365 (76.16%), Query Frame = 0


Query: 22  HKLQENETTPR---RCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIR 81
           HK Q+ +   +   R EWD +L+ VVSSS+  +ASD +G +EFDP+D+++ATAGI+RKIR
Sbjct: 7   HKQQQEQAQQQEEARYEWDLSLSTVVSSSS-SSASDVIGAIEFDPTDNIVATAGISRKIR 66

Query: 82  GYRLHNLLPENIHNGS-VTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVV 141
            Y L +LL  N  +G+ V+ +D   A E+ ICTPAKLSSLRW+PG  GR++GSGDYDGVV
Sbjct: 67  FYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDGVV 126

Query: 142 MEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCDGGECVA 201
           MEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E V 
Sbjct: 127 MEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVG 186

Query: 202 VVQPS-VIRSPVCCVEFNPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVK 261
           VV+P+ + RS VCCVEF+P G   VAVGCADRK Y YD RK+ +P +  +GH KTV+YV+
Sbjct: 187 VVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVR 246

Query: 262 FVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSED 321
           F+DGGTVV+A TDG LK+W  E+G   RV RTYEGHVN R+FVGLSVWRNG L GCGSE+
Sbjct: 247 FLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCGSEN 306

Query: 322 KRVFVYDKRWGEPIWVKEFDGVGSGYG----LVSSVCWRQVGEDECTLVAGGSDGVLQVF 376
            RVFVYD+RWG+P+WV  F+ VG   G     VSSVCWRQ G D+CTLVAGGSDGVLQV+
Sbjct: 307 NRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVY 366

[Close]

BLAST of CmUC09G172960 vs. TAIR 10
Match: AT5G52250.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 406.0 bits (1042), Expect = 3.3e-113
Identity = 200/344 (58.14%), Postives = 253/344 (73.55%), Query Frame = 0


Query: 33  RCEWDFTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHN 92
           RC+WD +L+AVVSS++ G  SD +G +EFDP+  +IAT GIARKIR YRL +LL      
Sbjct: 53  RCDWDLSLSAVVSSASTG--SDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLLE----- 112

Query: 93  GSVTQLDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERD 152
              ++ DH  ASE  ICTPAKLSSL+W+P  +GR++GSGDYDGVV EYD+E +VP+ ERD
Sbjct: 113 ---SRDDHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERD 172

Query: 153 EHGGRRVWSVDYSTVE-PVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEF 212
           EHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R +GG     V+P    + +C VEF
Sbjct: 173 EHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGG-GAAICSVEF 232

Query: 213 NPYGSALVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLK 272
           +P+G + +AVGCADR AY YD R++ +P++V +GH KTVTY +F+D  T+V+ STDGSLK
Sbjct: 233 DPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLK 292

Query: 273 MWRTEEGGGARVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWV- 332
            W  +   G RV RTY GHVN R+FVGLSVWR+GGL+  GSE+ +VFVYDKRW EP+WV 
Sbjct: 293 QWDID--NGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVC 352

Query: 333 --KEFDGVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLQVFVG 373
                +  GS    VSSVC RQV ED CTLVAGGSDG L++F G
Sbjct: 353 GLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSG 382

[Close]

BLAST of CmUC09G172960 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-48
Identity = 112/327 (34.25%), Postives = 173/327 (52.91%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGSVTQLDHTRASEFCICTP 111
           +++ +  +EFD  D L ATAG++R I+ +   ++         V +    +     + T 
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSV---------VNEPADMQCPIVEMSTR 429

Query: 112 AKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVV 171
           +KLS L W       I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP +
Sbjct: 430 SKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPSM 489

Query: 172 GASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAYGY 231
             SGSDD  V+VW TR +     A V    +++ +CCV++NP  S  +AVG AD   + Y
Sbjct: 490 LVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYY 549

Query: 232 DRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMWRTEEGGGARVTRTYEGHV 291
           D R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++       RT+ GH 
Sbjct: 550 DLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGHT 609

Query: 292 NGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVG-------SGYGLVS 351
           N ++FVGL+V  N   + CGSE   V+VY K    P+    F           +G   +S
Sbjct: 610 NEKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFIS 669

Query: 352 SVCWRQVGEDECTLVAGGSDGVLQVFV 372
           +VCW+    D  T++   S G ++V V
Sbjct: 670 AVCWK---SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of CmUC09G172960 vs. TAIR 10
Match: AT3G15354.1 (SPA1-related 3 )

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-45
Identity = 117/331 (35.35%), Postives = 174/331 (52.57%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPEN--IHNGSVTQLDHTRASEFCIC 111
           +S+ +  + FD    L ATAG+ +KI+ +  ++++ +N  IH   V            + 
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVE-----------LA 592

Query: 112 TPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEP 171
             +KLSSL W   +  +I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ +P
Sbjct: 593 GRSKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADP 652

Query: 172 VVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSALVAVGCADRKAY 231
            + ASGSDDGT          G  +  ++    ++ VCCV+F       +A G AD K Y
Sbjct: 653 TLLASGSDDGT----------GVSIGTIK---TKANVCCVQFPSDSGRSLAFGSADHKVY 712

Query: 232 GYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMW---RTEEGGGARVTRT 291
            YD R  + P+    GH+KTV+YVKFVD  T+VS+STD +LK+W    +  G       +
Sbjct: 713 YYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHS 772

Query: 292 YEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGVGSGYGL---- 351
           + GH N ++FVGLSV  + G I  GSE   VFVY K +  P+    F+   S  GL    
Sbjct: 773 FTGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDD 832

Query: 352 ----VSSVCWRQVGEDECTLVAGGSDGVLQV 370
               +SS+CWR       TLVA  S+G +++
Sbjct: 833 ASQFISSICWR---GQSSTLVAANSNGNIKI 832

[Close]

BLAST of CmUC09G172960 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-45
Identity = 119/346 (34.39%), Postives = 180/346 (52.02%), Query Frame = 0


Query: 38   FTLAAVVSSSAIGAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNGSVTQ 97
            F    V+ +S +   S+ +  + FD  +   ATAG+++KI+ Y  ++L  E++       
Sbjct: 708  FETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVD------ 767

Query: 98   LDHTRASEFCICTPAKLSSLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGR 157
              H  A E  +   +KLS + W   +    L S DYDG+V  +D+     I    EH  +
Sbjct: 768  -IHYPAIE--MPNRSKLSGVCWNNYIR-NYLASSDYDGIVKLWDVTTGQAISHFIEH-EK 827

Query: 158  RVWSVDYSTVEPVVGASGSDDGTVQVWDTRCDGGECVAVVQPSVIRSPVCCVEFNPYGSA 217
            R WSVD+S   P   ASGSDD +V++W+   +   C+  ++     + VCCV+F+P  S 
Sbjct: 828  RAWSVDFSEACPTKLASGSDDCSVKLWN--INERNCLGTIRNI---ANVCCVQFSPQSSH 887

Query: 218  LVAVGCADRKAYGYDRRKMREPVVVFEGHAKTVTYVKFVDGGTVVSASTDGSLKMW---R 277
            L+A G +D + Y YD R +R P  +  GH K V+Y KF+D  T+V+ASTD +LK+W   +
Sbjct: 888  LLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKK 947

Query: 278  TEEGGGA--RVTRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKE 337
            T  GG +    + T+ GH N ++FVGLS   + G I CGSE   V+ Y +    PI   +
Sbjct: 948  TTHGGLSTNACSLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPITSYK 1007

Query: 338  FDGVGSGYG---------LVSSVCWRQVGEDECTLVAGGSDGVLQV 370
            F  +    G          VSSVCWR+      +  + GS  VLQ+
Sbjct: 1008 FGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIKVLQL 1035

The following BLAST results are available for this feature:

BLAST of CmUC09G172960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887335.1	1.9e-203	92.61	WD repeat-containing protein RUP2-like [Benincasa hispida]	[more]
XP_004148378.3	2.9e-191	86.53	LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus]	[more]
KAA0038490.1	2.9e-191	86.61	WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]	[more]
XP_022952662.1	6.2e-178	86.27	WD repeat-containing protein RUP2-like [Cucurbita moschata]	[more]
KAG6571808.1	8.9e-177	85.71	WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC09G172960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA7	2.5e-129	62.19	WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 S...	[more]
Q9LTJ6	4.7e-112	58.14	WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 S...	[more]
P43254	2.4e-47	34.25	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q9LJR3	6.9e-47	35.95	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1	[more]
P93471	2.0e-46	34.04	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]

BLAST of CmUC09G172960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHK2	1.1e-191	86.53	Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV...	[more]
A0A5A7T553	1.4e-191	86.61	WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1GKZ5	3.0e-178	86.27	WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I327	6.2e-176	85.67	WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC1114705...	[more]
A0A5N6QZY3	6.7e-146	70.62	WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH...	[more]

BLAST of CmUC09G172960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23730.1	1.8e-130	62.19	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52250.1	3.3e-113	58.14	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	1.7e-48	34.25	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G15354.1	1.7e-45	35.35	SPA1-related 3	[more]
AT4G11110.1	1.7e-45	34.39	SPA1-related 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 104..141 e-value: 120.0 score: 3.9 coord: 236..274 e-value: 3.6E-5 score: 33.2 coord: 144..185 e-value: 0.036 score: 23.2 coord: 280..321 e-value: 0.91 score: 17.3 coord: 190..232 e-value: 0.16 score: 21.0 coord: 326..371 e-value: 130.0 score: 3.6 coord: 42..81 e-value: 140.0 score: 3.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 153..185 e-value: 0.0075 score: 17.1 coord: 238..273 e-value: 8.6E-4 score: 20.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 173..187 score: 8.770704
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 243..283 score: 10.675542
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 32..373 e-value: 4.0E-82 score: 277.8
IPR044616	WD repeat-containing protein RUP1/2	PANTHER	PTHR45389	WD REPEAT-CONTAINING PROTEIN RUP1	coord: 13..375
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 243..278 score: 8.729241
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 58..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G172960.1	CmUC09G172960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding