CmUC09G168510 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G168510
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RING-type domain-containing protein
Location	CmU531Chr09: 8055687 .. 8062560 (+)
RNA-Seq Expression	CmUC09G168510
Synteny	CmUC09G168510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTCCCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAACCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACTCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGGAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTTAGTAGAGGGAACTGTCCCCTTTGCAATGGCTTCATTTTGGAGATTCTTGACATCTTCTGATTTTCTCACAAATTAAGATGGAATTTAAACCATTTTTTTCTTTCACAATTTTTTTAATGGCTTCTTGAAATATTTGTGAATACTCCTCTTTGAATGAACTATTTCAAGTTACTTTTTCTAGCCTCATATTATACATCAGTCTGATTATTCTCATTTGGTGGTTTGTGTTTGACAGGGTGGAAATTAAGGGAAAATTCATGAGGTTTTAAGTTGATTCAAATCATATCAAATACATTTAAATACATCTTTTAATCAAATAGAAATTAATTAATTACTTTGGATTTTTTTTTTTTTTAATTTTCTTTTTCAATTTCCTTTACTTTTAAGATGTGTTTTGGAAGTAAAAGACAACATTGACATAAAAATATGGATTTAATTTATGGGGTACTGGTTGGTCCAAGAGATTGAATTTCATAATCCTACTCATGTGACATCCCATTTTTTCTTTCCTTTTTTCAGGATCTGGCCCTCTCATTTCTAACCATTAATACTTTTCAAACTTATCACTTTTTTCAAGTTCAGATTCAATGAGCAAATCCCATATATTTTCATTTCCAAAAACATCTTTATTATTATGCATCTTATTTCCAACATTCTCATTTTCCAGTTTTTCATATATTAGCACATCAAAACGAAATGGGCCAATTATAACTTTAAATCTTCAATTTCATCAAATTAAACCTTTGATTATTACGTAAATATACTTGAGTGATTTTGTTTGAAATTTGCTTAATTTACTGGTTGTGGGTAACTTTCAAATTTAGGTTTGATAATGGAAAAATTGGACCAAGGAAAACTAGTCTAACTTCACAAACCATATGAGAAGATGGGAGTTAGAATGAAGCTACCCCAGATGAGATGACCTTAGGGTTTTTCCAATCCTTTTTCAGATTGAATTTAAGAAGGCATAATCAAGCCACCCCACCCAAAGAGGGAATGTAGGAGTCTACAAATAGCCAATCCTACAAAGAAATGGGCCAAGCCTTGGAGGTCGAGGGTGAGGAGGGCAATTGGGATAAATGGCTTAGTTGCCACCTTGTATGAAATTTCTTGCATGTTTCAAAGTTTAGATAACATTTTACTATTTATGTCTTAGTTTTACTCTCAATATTTTTTTTTTAAAATTTTTTTGACATTTTTCCTAAGTCCAAAATTACCTATAACAAATTTTAACAAGGACAATTTAAATCCATATGGTTCAATTTAATAAAATAAAAAGCTTAAATTGAATTGTCCAAATAAATACGAAAAAATGAAGTTTTTTAGTTTTTCTTTTTTCTTTTTGGTCAAAAATAATGAATTAATATGTACAAAAATACTATAAAAATAAAAAGAAAAGTTCCCATTTTGGTTCTTTGTAATTGAGTTGGGTTTTATTATTGCTTAAAATGTATTGATACTATATTTATAAATTACAAAGCTAGTTATAGTCGTTCATTAAATATTAATTGACAATAAACTATTAATAGTTTATTTATGGACATGTTTTATATTAAAGAAGGTTGTATAATTATTGTTATGTAATATTATATAATTTATAATATTTTACATAAAATATATTTTAATTTTAAAAAAAATGCATTGAATTTATAACACGACATAGTGTATTTTCACCAACATGTAAAATAATTAAACTCGACCAATTTCTCCAATGTTCACTATTGAAGTTTGTAAATTTATCGAGAAACTCCATGTTCATCTTTTTCTTTCTTTCTCCTTCCAATATTTTCAATAACTCCACCTGCGGCCACTACCGATGACCAACTCCAACAACAATCATCGACGGCGACATGCTCTAATGACCAATTGCAGCTACAATTACCATCAACAACTATTGTTGACTCACTCCAACAATATGTTTTGACGATCACCTCTGATAACCACCTTCAACAAAGTCCACTTGTGGCAATCATCTCCAAAGACCACCTCCATTGTCCAACTCCACGGACTACGACCTCTAGTGCCAACCACATATTGGATACCATTGTGATTGCATCTTCTAATGAAGGCTTTTTCACTTCTTTGTTCGGCACCTAAGCGTTTTACCAACACAGCTAAGTTAGGCCTTGGTGCAATTTTGATATCACTTATTAAGGAAAAAGGACCTTTAGATATCACCACAATGATATGATATTGCCCACTTCGGGTATAAACCATTGTGACTTTACTTTTGGTTTTGCCCAAAGGGCCTCATACAGTTGGTGATAGTTATTATCCCCTATATACCAATGATTATCCCCTTATTTGGTCATTGTAGAACTTTGATCGCATTTTCAACACCATCATTCATGCATAACAAATCATAACCTACAATTTGGCATAAGATGTTACAAAAAGCCCCAAACTCCTCCATGACCTACTTTTTTTGTACATATTAAACTCATACATCCCACTAATGTGAAAGTATACTATAATTATAAAATATATGTGAAGATTTTAAGTTGACATTTCAATTGAGTGTTAAAAAATTAGAAAAATATATGTGCAACTGAAGGAAAAAAAAAAAATTAAGGCTTTTTTTTTTTTTTTTTTTTAATTTATATGCATGATACAAAAATACATGTGTACTTCTAAAAAAAAATAAATAAAATGCAATCCATACTTTTCTCACAAAAAGATGTATAAAGTTATTGAATAAAAATATATCCAAAATAAGTAGTCACAATAAAAGCAAATTATTCTGCCAAACAAAATTGCACTAGATGCTATTGACTTCAAAACTTAATTTAGCACTCAAATACAAATTTCTTGACTTAGGAAAAGAAAAATACCTCTCCACCCCAAACAAAAACATATTGAACTCGAAACTTTAGAATTTAAAGTGTTTGGATAACTAAATCTGAAAATAATTTTCAAGAAAAAGAATATGAATTATCTGCCAATTAATGTTTACTGAATTCAATGTGAAAATATAAAATAGGATATGGATGAATCAAACAAATTAGAAGTTTGTCTATTTTTGGGTCTTGAGATCGTATTGGAATAAATCGAAGATGATTCAAATGTTGTTAAGTGATGCGAGGTGGAATTTGGAAGAGATTTGGGCTTGGAAGAGATTTGTGGCTTGATTTGGGCTAAAGCTTCCACTAGGTTTAGGATTAGTGTTTTTTCCTTAAAAATAAAAAAACCTCTATTCTTTGTCTTTTAGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCCGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGTACGTACCCACGGCTCTCCTTTCTCTCTCCTACCGTCTTCTTTCTCTCTCTTCCTTTCGTTAGTCTCTCTCTCGATCTGCAGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCGTGAGTTTCGTCGCAGCCACCGCCTTTTTATCATCTTTCGTTCGGTACCTCTAAAACTACATGCTTTATTGTTTTTTTTTCTTCTTTTTCTTTTTTTTTTTTTTCATAAATGTTCATGAATCTGATGTGAAGTTGAATTGTAATGTTGACTTGCTACTGTAATGATTGTGATTTTTGATGAGTTCATGGTCTAAATCTGCCCTTTTTTGCCAATTTGTTCTTTTGAATGGAGAGTTTCGATGTTTTTTTTTTTTTAATTATTATTTTTTAAAAATTATTATTATATTAAATTTAGGGTTTTTGGAGTCTTGGAGTTCTGCAGGATGTATTGTTGATTTTCTTAGCATTTGTTCATTCTTCAACATTGGATTATGACCGTAGGTGATTGCTGAAATTATTTTGTTTTGCATCTGTGCGAAATTTGATGAATGAGATGGGATATGGATATTGCTAGGTAATTCGTGAGAGATTGTGAGAAGACAGTCGCCAATTTTAATGACATTTTGTTTAGGGCAACCCCATGGACCCAACCCAACCCGACCCCTTAATATATGGTTGGGTTGGGTTGTCCTCTCTAATTGGGTTGGAAAGCTGATCAACCCGAAATTTTGGGTTGGTCCAAAATATACCCCTACACCAACCCGACCCAACCTAACCTATGTACACTCCTAACTATAATAAAACAAAATCGAGTTGAGATAGACAGACATATTTGCAATTCATTAAAATTTAAAAAGGTAAAATGGATTTAAAATGTTTTTTAATGATCCTTTTTTTTTCAATATATATATAGATATGGATGTAGATGTTGGTATAGATATAGATTACCCTGAAGGGAGTAGGTTAGCATTTTTATTTTTGGGCAAGTTGGAGCAATTTTCTCTTACAATCTATACCCTAAAAGGTGTGTTTTCTCAATTGATAGCTCTGACGGCTTTTCAACCTTTATCAGCTGTCAATCATCGAGCGCAGATAGACTGAAGGTTGGCACCTCAAACCTCCAGTGAAAATGGTAATTCCTTTTTCACTCAAGTTCTGGTGTCCGTTAGTTTAAGGTTTTTGTTACTGTTAATCTTACTTCAGGGCTTAAGCTGTTGCTTCATTTGTTTTTTTCCTTCTCGTATCTCAGATCCTTCACGGTTTCTACAATATTTGGTTTATATATATTGGACTTTGATTTGGGTTTTATTTGGCAGTTATTTTTCTCGTACTTCAAGGATTTGGTGGGCAGAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGGTATCCAATTTTTTTCACATGTTATTTTGCAATAAATTTGATCAAATACTTGCACATTCTGATGTCCTGCACTTGTGGCGAGGGTTACTTTGATATTGTTTTTCTCTCTTTAATCGTTACCATCTTTCATAGGCATCTGTTCTCATCTCTGTTTCTTCTGTTCTAATGTTCCTTTGATTCTAATAATTGGAAGGTTCTCTGGCGTGATATATGATGTGTGGTTATGGTTCACAGATTATTTGTACCATCGTCTGTTTTCGTCACCCTAGAGTTTTAATTATATGTATATTGTTTAAATTGAGAATGTTGATATTCTTTTCATCCTTAGCTCTTGGATTTTTCATGGGAGAAAAGTTTCAAGTAATTTTGTTGGTGGTTCCCAAATTTGGTGAAATTTTTAGGTTATCTTGTCGACTGGTTAGAGTTCCTAGCAGTACCGTGCCTTTATTTCTTGATTTTCTTATTCATATATTACAAAATTTGAACCTTACAACCTTCTAGGAGAAATAAAGATATCTTAACCATTGACATCATCGTTATTATTATTTGAGGATTTGGGCGGGAGGGTAAAACGGTTTTCTGTTTGAGTTGTACTTTGTTTCTATTTTTTAAATTGGTGCTTGTATTCTTACCATGCCCTTCATGAATTCTTAGTTAAATTCAAAAAAATAAGAACAATTTTTCTAAAAACTACTTTATGAAGATGGTAGTGGTAAGACATGTTGGCTCTGATTATTTAGGATTGGTATAAACTCTTGTTTTTGCATGATCAGGAAGATCTGTTAAATCAAATTATTTCACAATGTTCTATCCAACCTTCTTAAATTTAATGAGTACCCCTCCCTGCATCCATCCGTCACCCATTTTGTAATCTGAACCTGTAATTTATGTTGATGTCATTAGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

mRNA sequence

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTCCCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAACCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACTCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGGAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCCGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

Coding sequence (CDS)

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTCCCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAACCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACTCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGGAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCCGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

Protein sequence

MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRDDVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTRAVSAAPSLRQISRRNSTRLVPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRIPNSSPSSHVAPSAHSHLRLPATCYARPPFVAVGEVIIGFLPPNFAAGEAEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG

Homology

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BLAST of CmUC09G168510 vs. NCBI nr
Match: KAA0026218.1 (nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis melo var. makuwa])

HSP 1 Score: 545.8 bits (1405), Expect = 3.7e-151
Identity = 305/347 (87.90%), Postives = 317/347 (91.35%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS RFPGF+SAEM PN+EQS EPTTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD SPD NNSA  A+ GGGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGGGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA    A+
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAI---AD 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
            EE EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +EV
Sbjct: 241 VEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--NEV 300

Query: 301 TTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CmUC09G168510 vs. NCBI nr
Match: XP_008458019.1 (PREDICTED: nucleolin-like [Cucumis melo])

HSP 1 Score: 542.3 bits (1396), Expect = 4.1e-150
Identity = 303/347 (87.32%), Postives = 316/347 (91.07%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS RFPGF+SA+M PN+EQS EPTTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD SPD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGAGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA    A+
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAI---AD 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
            EE EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +EV
Sbjct: 241 VEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--NEV 300

Query: 301 TTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CmUC09G168510 vs. NCBI nr
Match: XP_011659191.1 (uncharacterized protein LOC101222466 [Cucumis sativus])

HSP 1 Score: 498.0 bits (1281), Expect = 8.8e-137
Identity = 282/347 (81.27%), Postives = 299/347 (86.17%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGR+LAGGFTLNDVL IQKRA P+ SPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRER SWKF +DRLRL++RSQIPP NS RFPG +SAEM  N+E S EPTTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLVP---PSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTRL P   PSSEATNS+ SPD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPD-NNSAAAASGSGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEP REGTRRLSAALAEERSMSAREAV AQEAADAEAT +E E
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
           Q   ++E+ AES PAPVRMSLMDLLEETDRQMGFEGS YRIEDE+EEEE E E       
Sbjct: 241 Q---QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS----- 300

Query: 301 TTVCGG---GGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVCGG   GGTE +CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 338

[Close]

BLAST of CmUC09G168510 vs. NCBI nr
Match: KAE8646249.1 (hypothetical protein Csa_016080 [Cucumis sativus])

HSP 1 Score: 471.5 bits (1212), Expect = 8.9e-129
Identity = 269/334 (80.54%), Postives = 286/334 (85.63%), Query Frame = 0


Query: 14  MLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRDDVGKSPVGNRERK 73
           MLAVSDGR+LAGGFTLNDVL IQKRA P+ SPAVRL+GRTLLDIIRDDVGKSPV NRER 
Sbjct: 1   MLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRDDVGKSPVSNRERT 60

Query: 74  SWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTRAVSAAPSLRQISR 133
           SWKF +DRLRL++RSQIPP NS RFPG +SAEM  N+E S EPTTT AVSAAPSLRQISR
Sbjct: 61  SWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAVSAAPSLRQISR 120

Query: 134 RNSTRLVP---PSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSES 193
           RNSTRL P   PSSEATNS+ SPD NNSA  A+  GGRSLLRPQMSRHNSTR SVERSES
Sbjct: 121 RNSTRLNPSVQPSSEATNSNASPD-NNSAAAASGSGGRSLLRPQMSRHNSTRFSVERSES 180

Query: 194 FTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEGEEEEDAESA 253
           FTDLTEP REGTRRLSAALAEERSMSAREAV AQEAADAEAT +E EQ   ++E+ AES 
Sbjct: 181 FTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ---QQEQVAEST 240

Query: 254 PAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGG---GGTE 313
           PAPVRMSLMDLLEETDRQMGFEGS YRIEDE+EEEE E E       TTVCGG   GGTE
Sbjct: 241 PAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS-----TTVCGGGGSGGTE 300

Query: 314 RNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
            +CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 PHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 325

[Close]

BLAST of CmUC09G168510 vs. NCBI nr
Match: KAG6575985.1 (hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-127
Identity = 266/350 (76.00%), Postives = 292/350 (83.43%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RASP+PSPAVRLNGRTLLDIIRD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLNGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVG SPV NRERKSWKFL+DRLRLNLRSQI  PNS R P FSSAEM PNEE+S+E TTT 
Sbjct: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSESTTTT 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           A  AAPSLRQISRR+S+RL     P SEA NSDDSP+NNNS+T +  G  RSL +PQMSR
Sbjct: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           H+STR ++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE TA+E E
Sbjct: 181 HSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAEITAHEEE 240

Query: 241 QEEGEEEEDAE---SAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESD 300
           ++E E+E+  E   SA APVRMSLMDLLEETDR+MG EGSRYRIE+EEEEEEEEEEEE  
Sbjct: 241 EQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEEIH 300

Query: 301 DEVTTVCGGG---GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
            +VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 HKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSR 348

[Close]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot
Match: Q1H595 (Sm-like protein LSM2 OS=Arabidopsis thaliana OX=3702 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-35
Identity = 76/90 (84.44%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 392 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 451
           EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM          LSVRNCFIR
Sbjct: 14  EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM----------LSVRNCFIR 73

Query: 452 GSVVRYVQLPPDGVDIELLHDATRREARGG 482
           GSVVRYVQLP DGVD++LLHDA RREARGG
Sbjct: 74  GSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot
Match: Q9Y333 (U6 snRNA-associated Sm-like protein LSm2 OS=Homo sapiens OX=9606 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.0e-24
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 392 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 451
           +V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHM          LSV+NCFIR
Sbjct: 14  DVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHM----------LSVKNCFIR 73

Query: 452 GSVVRYVQLPPDGVDIELLHDATRREA 479
           GSVVRYVQLP D VD +LL DA R+EA
Sbjct: 74  GSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot
Match: O35900 (U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus OX=10090 GN=Lsm2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.0e-24
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 392 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 451
           +V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHM          LSV+NCFIR
Sbjct: 14  DVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHM----------LSVKNCFIR 73

Query: 452 GSVVRYVQLPPDGVDIELLHDATRREA 479
           GSVVRYVQLP D VD +LL DA R+EA
Sbjct: 74  GSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot
Match: Q54TF6 (Probable U6 snRNA-associated Sm-like protein LSm2 OS=Dictyostelium discoideum OX=44689 GN=lsm2 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-21
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 392 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 451
           E+TVELKNDL+I G L SVDQ+LNIKL++ +V ++DKYP+M          +SV+NCFIR
Sbjct: 14  EITVELKNDLSITGLLQSVDQFLNIKLKDIKVNEEDKYPYM----------ISVKNCFIR 73

Query: 452 GSVVRYVQLPPDGVDIELLHDATRREAR 480
           GSVVRYV LP + VD+E L D +R EAR
Sbjct: 74  GSVVRYVHLPAEDVDVETLQDHSRLEAR 91

[Close]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot
Match: P38203 (U6 snRNA-associated Sm-like protein LSm2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-18
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 390 EAEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCF 449
           + EV VELKND+ I+GTL SVDQ+LN+KL+N    D+ KYPH+           SVRN F
Sbjct: 12  DQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLG----------SVRNIF 71

Query: 450 IRGSVVRYVQLPPDGVDIELLHDATRRE 478
           IRGS VRYV L  + VD  LL DATRRE
Sbjct: 72  IRGSTVRYVYLNKNMVDTNLLQDATRRE 89

[Close]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL
Match: A0A5D3E4J3 (Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.8e-151
Identity = 305/347 (87.90%), Postives = 317/347 (91.35%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS RFPGF+SAEM PN+EQS EPTTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD SPD NNSA  A+ GGGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGGGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA    A+
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAI---AD 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
            EE EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +EV
Sbjct: 241 VEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--NEV 300

Query: 301 TTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL
Match: A0A1S3C6E1 (nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 2.0e-150
Identity = 303/347 (87.32%), Postives = 316/347 (91.07%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS RFPGF+SA+M PN+EQS EPTTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD SPD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGAGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA    A+
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAI---AD 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
            EE EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +EV
Sbjct: 241 VEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--NEV 300

Query: 301 TTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL
Match: A0A0A0K6R9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 4.3e-137
Identity = 282/347 (81.27%), Postives = 299/347 (86.17%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGR+LAGGFTLNDVL IQKRA P+ SPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTR 120
           DVGKSPV NRER SWKF +DRLRL++RSQIPP NS RFPG +SAEM  N+E S EPTTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLVP---PSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTRL P   PSSEATNS+ SPD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPD-NNSAAAASGSGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEP REGTRRLSAALAEERSMSAREAV AQEAADAEAT +E E
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 QEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEV 300
           Q   ++E+ AES PAPVRMSLMDLLEETDRQMGFEGS YRIEDE+EEEE E E       
Sbjct: 241 Q---QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS----- 300

Query: 301 TTVCGG---GGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           TTVCGG   GGTE +CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 338

[Close]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL
Match: A0A6J1KT79 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 5.2e-127
Identity = 268/350 (76.57%), Postives = 288/350 (82.29%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYD+MLAV DGRE+ GG TLNDVLT+ KRASP PSP VRLNGRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60

Query: 61  DVGKSP-VGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTT 120
           DVGKSP  GNRERKSWKFL+DRLRLNLRSQIPPPNS RF  FSSAEMT NEEQS E TT 
Sbjct: 61  DVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTP 120

Query: 121 RAVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGG---GRSLLRP 180
              +A P LRQISRRNSTRL   +P S EATNS +SP+NNNS +T A  G    RSLLRP
Sbjct: 121 VVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRP 180

Query: 181 QMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTRRLSAALA ERSMSARE VA QEAADAE TA
Sbjct: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA 240

Query: 241 NEAEQEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIED--EEEEEEEEEEE 300
           NE   ++ E +  A    APVRMSLMDLLEETDRQMGFEGSRY+IED  EEEEEEEEE+E
Sbjct: 241 NE---DDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDE 300

Query: 301 ESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           E +DEV  V  GGG+E+ CCVCMVRHKGAAFIPCGHTFCRLCSREL V+R
Sbjct: 301 EKEDEVAVV--GGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSR 345

[Close]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL
Match: A0A6J1H6Y3 (chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461059 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126
Identity = 265/348 (76.15%), Postives = 284/348 (81.61%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGREL GG TLNDVLT+ KRASP PSP VRLNGRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60

Query: 61  DVGKSP-VGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTT 120
           DVGKSP VGNRERKSWKFL+DRLRLNLRSQIPPPNS RF  FSSAEMT NEE+S E TT 
Sbjct: 61  DVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTP 120

Query: 121 RAVSAAPSLRQISRRNSTRL---VPPSSEATNSDDSPDNNNSATTAAVGG---GRSLLRP 180
              +A P LRQISRR+STRL   +P S EATNS +SP+NNNS +T A  G    RSLLRP
Sbjct: 121 VVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRP 180

Query: 181 QMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE TA
Sbjct: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA 240

Query: 241 NEAEQEEGEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEES 300
           +E   ++ E +  A    APVRMSLMDLLEETDRQMGFEGSRY+IEDE EEEEEEEEEE 
Sbjct: 241 DE---DDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEE 300

Query: 301 DDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           + E      GGG+ER CCVCMVRHKGAAFIPCGHTFCRLCSREL V+R
Sbjct: 301 EKEEEVAVVGGGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSR 345

[Close]

BLAST of CmUC09G168510 vs. TAIR 10
Match: AT1G03330.1 (Small nuclear ribonucleoprotein family protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.9e-36
Identity = 76/90 (84.44%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 392 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 451
           EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM          LSVRNCFIR
Sbjct: 14  EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM----------LSVRNCFIR 73

Query: 452 GSVVRYVQLPPDGVDIELLHDATRREARGG 482
           GSVVRYVQLP DGVD++LLHDA RREARGG
Sbjct: 74  GSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of CmUC09G168510 vs. TAIR 10
Match: AT3G07120.1 (RING/U-box superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-35
Identity = 134/360 (37.22%), Postives = 188/360 (52.22%), Query Frame = 0


Query: 14  MLAVSDGRELAGGFTLNDVL----TIQKRASPTPSPAV-------RLNGRTLLDIIRDDV 73
           M A+        G +L+ VL     I+  + P+P P         R   +TL DIIR++ 
Sbjct: 1   MSALKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY 60

Query: 74  GKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTRAV 133
            K   G+++R +W+  +++LRL  R+     +S   P  +S  + PN +     T  R+ 
Sbjct: 61  AKE--GHKDRTTWQIFREKLRLK-RTGSAWTSSLHIP--ASDILIPNPKHI--GTAFRSH 120

Query: 134 SAAPSLRQI----------SRRNSTRLVPPSSEATNSDDSPDNNNSATTAAVGGGRSLLR 193
           SA  ++R +                     SS    S  +PD++   +    G      +
Sbjct: 121 SAGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFK 180

Query: 194 PQMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAE-A 253
           PQ+SRH+S R   E  E+            R       EER MSAREAVAAQEAA+AE A
Sbjct: 181 PQLSRHDSVRDHSEGEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAA 240

Query: 254 TANEAEQEEGEEEED---------AESAPAPVR-MSLMDLLEETDRQMGFEGSRYRIEDE 313
            A  +E E+ ++EED         + SA  P + MSLMDLLEETDRQMG  GSRY + DE
Sbjct: 241 AAGGSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAM-DE 300

Query: 314 EEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 342
           +EE EE+EE+E+++E     GGG  E +CCVCMV+ KGA+F PCGHTFC+LCS+EL   +
Sbjct: 301 DEEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQK 343

[Close]

BLAST of CmUC09G168510 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 8.8e-18
Identity = 93/264 (35.23%), Postives = 117/264 (44.32%), Query Frame = 0


Query: 78  LKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTRAVSAAPSLRQISRRNST 137
           + D+ R + +   PPP+       S +  +  E    E   +R  +A  SLR+  R    
Sbjct: 35  MADKNRTSPQILSPPPSR------SQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRN 94

Query: 138 RLVPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEP 197
             V  SS +  S D+P  N    +  +G             NS  ++ E S         
Sbjct: 95  GSVWISSNSIPSLDTPIPNRDNVSHQLG---------FLLSNSGNVTEEAS--------- 154

Query: 198 AREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEGEEEEDAESAPAPVRMS 257
           + EG  RL A LAEER++SAR                       EEE  AE    P RMS
Sbjct: 155 SVEGRIRLGAVLAEERALSAR-----------------------EEETPAEREVEPARMS 214

Query: 258 LMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRH 317
           LM+LLEE + QM F      ++ E EEE              V      E +CCVCMVR 
Sbjct: 215 LMELLEENEGQMSF----VSVDGEAEEE--------------VAAVTAAEISCCVCMVRS 233

Query: 318 KGAAFIPCGHTFCRLCSRELWVNR 342
           KGAAFIPCGHTFCRLCSRELWV R
Sbjct: 275 KGAAFIPCGHTFCRLCSRELWVQR 233

[Close]

BLAST of CmUC09G168510 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 8.8e-18
Identity = 93/264 (35.23%), Postives = 117/264 (44.32%), Query Frame = 0


Query: 78  LKDRLRLNLRSQIPPPNSFRFPGFSSAEMTPNEEQSTEPTTTRAVSAAPSLRQISRRNST 137
           + D+ R + +   PPP+       S +  +  E    E   +R  +A  SLR+  R    
Sbjct: 35  MADKNRTSPQILSPPPSR------SQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRN 94

Query: 138 RLVPPSSEATNSDDSPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEP 197
             V  SS +  S D+P  N    +  +G             NS  ++ E S         
Sbjct: 95  GSVWISSNSIPSLDTPIPNRDNVSHQLG---------FLLSNSGNVTEEAS--------- 154

Query: 198 AREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEGEEEEDAESAPAPVRMS 257
           + EG  RL A LAEER++SAR                       EEE  AE    P RMS
Sbjct: 155 SVEGRIRLGAVLAEERALSAR-----------------------EEETPAEREVEPARMS 214

Query: 258 LMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRH 317
           LM+LLEE + QM F      ++ E EEE              V      E +CCVCMVR 
Sbjct: 215 LMELLEENEGQMSF----VSVDGEAEEE--------------VAAVTAAEISCCVCMVRS 233

Query: 318 KGAAFIPCGHTFCRLCSRELWVNR 342
           KGAAFIPCGHTFCRLCSRELWV R
Sbjct: 275 KGAAFIPCGHTFCRLCSRELWVQR 233

[Close]

BLAST of CmUC09G168510 vs. TAIR 10
Match: AT4G13100.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-13
Identity = 61/131 (46.56%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 212 ERSMSARE-AVAAQEAADAEATANEAEQEEGEEEEDAESAPAPVRMSLMDLLEETDRQMG 271
           E + S+R+ + AA+EAA+ E           E EE       P RMSLM+LLE+ D    
Sbjct: 124 ETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREE-----MQPPRMSLMELLEDND---- 183

Query: 272 FEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFC 331
             G  Y +    +E E E  +  D     V   G  E  CCVCMVR KGAAFIPCGHTFC
Sbjct: 184 --GHMYEL-SARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFC 242

Query: 332 RLCSRELWVNR 342
           RLCSRELWV R
Sbjct: 244 RLCSRELWVQR 242

The following BLAST results are available for this feature:

BLAST of CmUC09G168510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026218.1	3.7e-151	87.90	nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis me...	[more]
XP_008458019.1	4.1e-150	87.32	PREDICTED: nucleolin-like [Cucumis melo]	[more]
XP_011659191.1	8.8e-137	81.27	uncharacterized protein LOC101222466 [Cucumis sativus]	[more]
KAE8646249.1	8.9e-129	80.54	hypothetical protein Csa_016080 [Cucumis sativus]	[more]
KAG6575985.1	1.7e-127	76.00	hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC09G168510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H595	2.7e-35	84.44	Sm-like protein LSM2 OS=Arabidopsis thaliana OX=3702 GN=LSM2 PE=1 SV=1	[more]
Q9Y333	8.0e-24	66.67	U6 snRNA-associated Sm-like protein LSm2 OS=Homo sapiens OX=9606 GN=LSM2 PE=1 SV...	[more]
O35900	8.0e-24	66.67	U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus OX=10090 GN=Lsm2 PE=1 S...	[more]
Q54TF6	2.9e-21	59.09	Probable U6 snRNA-associated Sm-like protein LSm2 OS=Dictyostelium discoideum OX...	[more]
P38203	1.3e-18	56.82	U6 snRNA-associated Sm-like protein LSm2 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of CmUC09G168510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4J3	1.8e-151	87.90	Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730...	[more]
A0A1S3C6E1	2.0e-150	87.32	nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1	[more]
A0A0A0K6R9	4.3e-137	81.27	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 P...	[more]
A0A6J1KT79	5.2e-127	76.57	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1	[more]
A0A6J1H6Y3	2.0e-126	76.15	chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CmUC09G168510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03330.1	1.9e-36	84.44	Small nuclear ribonucleoprotein family protein	[more]
AT3G07120.1	1.2e-35	37.22	RING/U-box superfamily protein	[more]
AT3G25030.1	8.8e-18	35.23	RING/U-box superfamily protein	[more]
AT3G25030.2	8.8e-18	35.23	RING/U-box superfamily protein	[more]
AT4G13100.1	1.0e-13	46.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..246
None	No IPR available	COILS	Coil	Coil	coord: 271..298
None	No IPR available	GENE3D	2.30.30.100		coord: 386..480 e-value: 3.4E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..247
None	No IPR available	PANTHER	PTHR46629:SF13	OS01G0917900 PROTEIN	coord: 4..341
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 4..341
None	No IPR available	CDD	cd16449	RING-HC	coord: 310..344 e-value: 2.06024E-8 score: 48.2325
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 309..339
IPR001163	LSM domain, eukaryotic/archaea-type	SMART	SM00651	Sm3	coord: 385..460 e-value: 5.4E-9 score: 45.9
IPR001163	LSM domain, eukaryotic/archaea-type	PFAM	PF01423	LSM	coord: 392..459 e-value: 9.9E-13 score: 47.6
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 310..340 e-value: 1.9E-4 score: 21.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 275..365 e-value: 3.9E-8 score: 34.6
IPR016654	U6 snRNA-associated Sm-like protein LSm2	CDD	cd01725	LSm2	coord: 392..478 e-value: 1.78927E-50 score: 164.684
IPR010920	LSM domain superfamily	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 392..479

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G168510.1	CmUC09G168510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0046872	metal ion binding