CmUC08G147540 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G147540
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	E3 ubiquitin-protein ligase RING1-like
Location	CmU531Chr08: 16644830 .. 16645510 (-)
RNA-Seq Expression	CmUC08G147540
Synteny	CmUC08G147540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGGATACTCTCTACGATTACCACATATGGCAACCTGAAGAAGGTGAAGATGATCTTAATGTTACCATATCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTTCATCTTCACTTTCGCCACGTTCTCCAGTCAAATCACCTTCAAGAATTTCATACACTCGTAAATTCCTCTCTATCTTCATTCTTGATACCTTGCGACGTCTTTTTCGCTAGTGGCTCCAGTATCCTGATCGCCGTTTTCTCTGGCACCGGCGTCGCGCAAGACTTCTTGGACACGGCGGTGCCGGACGTTCTCTCCGTCGCGGCTGATATCGCATGCAATCCTCTTAATGCTGGCCGTCGAATACTTCCGTTGGCGGTGTCCGTTTTAGTCGTTTCGCCGTACAATGAACGCGAGGAAATTGCGCGAGTTTTGCGGGAATCAACGGCGCAAGCGTTTAAAACGTCGCCGGCTAGTGAGACGGCAATCGAAGCTCTGAAGAACGTGGAGATTGATGTCGGCGGAGAGCTATTGATCGGAGAATGTAGAATATGTTTGGATGAACTGATGAACGGAATGGAAGTTACGCGATTGCCGTGCGCTCATGTTTACCACAGAGACTGTATCGTTAAATGGCTGGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCACTGAGCTGA

mRNA sequence

ATGGCCATGGATACTCTCTACGATTACCACATATGGCAACCTGAAGAAGGTGAAGATGATCTTAATGTTACCATATCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTTCATCTTCACTTTCGCCACGTTCTCCAGTCAAATCACCTTCAAGAATTTCATACACTCGTAAATTCCTCTCTATCTTCATTCTTGATACCTTGCGACGTCTTTTTCGCTAGTGGCTCCAGTATCCTGATCGCCGTTTTCTCTGGCACCGGCGTCGCGCAAGACTTCTTGGACACGGCGGTGCCGGACGTTCTCTCCGTCGCGGCTGATATCGCATGCAATCCTCTTAATGCTGGCCGTCGAATACTTCCGTTGGCGGTGTCCGTTTTAGTCGTTTCGCCGTACAATGAACGCGAGGAAATTGCGCGAGTTTTGCGGGAATCAACGGCGCAAGCGTTTAAAACGTCGCCGGCTAGTGAGACGGCAATCGAAGCTCTGAAGAACGTGGAGATTGATGTCGGCGGAGAGCTATTGATCGGAGAATGTAGAATATGTTTGGATGAACTGATGAACGGAATGGAAGTTACGCGATTGCCGTGCGCTCATGTTTACCACAGAGACTGTATCGTTAAATGGCTGGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCACTGAGCTGA

Coding sequence (CDS)

ATGGCCATGGATACTCTCTACGATTACCACATATGGCAACCTGAAGAAGGTGAAGATGATCTTAATGTTACCATATCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTTCATCTTCACTTTCGCCACGTTCTCCAGTCAAATCACCTTCAAGAATTTCATACACTCGTAAATTCCTCTCTATCTTCATTCTTGATACCTTGCGACGTCTTTTTCGCTAGTGGCTCCAGTATCCTGATCGCCGTTTTCTCTGGCACCGGCGTCGCGCAAGACTTCTTGGACACGGCGGTGCCGGACGTTCTCTCCGTCGCGGCTGATATCGCATGCAATCCTCTTAATGCTGGCCGTCGAATACTTCCGTTGGCGGTGTCCGTTTTAGTCGTTTCGCCGTACAATGAACGCGAGGAAATTGCGCGAGTTTTGCGGGAATCAACGGCGCAAGCGTTTAAAACGTCGCCGGCTAGTGAGACGGCAATCGAAGCTCTGAAGAACGTGGAGATTGATGTCGGCGGAGAGCTATTGATCGGAGAATGTAGAATATGTTTGGATGAACTGATGAACGGAATGGAAGTTACGCGATTGCCGTGCGCTCATGTTTACCACAGAGACTGTATCGTTAAATGGCTGGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCACTGAGCTGA

Protein sequence

MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNSSLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRILPLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS

Homology

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BLAST of CmUC08G147540 vs. NCBI nr
Match: XP_038885922.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 210/226 (92.92%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQP+EGE DLNVT+SNSHLLPCDCFLFHLHFRHVLQSNH QEFH L+NS
Sbjct: 1   MAMDTLYDYHIWQPQEGEGDLNVTMSNSHLLPCDCFLFHLHFRHVLQSNHPQEFHLLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPC+VF A+GSSILIAVFS TGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL
Sbjct: 61  SLSSFLIPCNVFLATGSSILIAVFSDTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVLVVSPYNEREEI RVLRES+AQ FKT PASETAIE LKNV+IDVGGELLIGECR
Sbjct: 121 PLAVSVLVVSPYNEREEIGRVLRESSAQPFKTLPASETAIEGLKNVDIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. NCBI nr
Match: XP_004150446.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN47723.1 hypothetical protein Csa_018280 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPC+CFLFHLHFRH+LQSNH Q+FH L+NS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQFHYLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCDVFFA+ SSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGR IL
Sbjct: 61  SLSSFLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVLVVSPYNER+EI RVLRES+ QAFKT PASE AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLVVSPYNERQEIGRVLRESSPQAFKTLPASEMAIEGLKKVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. NCBI nr
Match: XP_022990569.1 (probable E3 ubiquitin-protein ligase ATL45 [Cucurbita maxima] >XP_022990570.1 probable E3 ubiquitin-protein ligase ATL45 [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 9.3e-113
Identity = 205/226 (90.71%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDY IWQPEE EDD+NVTISNSHLLPCDCFLFHLHFRHVLQSNH QE   L+NS
Sbjct: 1   MAMDTLYDYQIWQPEEHEDDVNVTISNSHLLPCDCFLFHLHFRHVLQSNHPQELQRLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCD FFASG SILIAVFS TGVAQDFLD AVPDVLSVAADIACNPLNAGRR+L
Sbjct: 61  SLSSFLIPCDAFFASGFSILIAVFSDTGVAQDFLDAAVPDVLSVAADIACNPLNAGRRVL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVL VSPYNEREEI RVLRES+ QAFKTSPASE+AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLAVSPYNEREEIGRVLRESSPQAFKTSPASESAIEGLKTVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. NCBI nr
Match: XP_023554199.1 (probable E3 ubiquitin-protein ligase ATL45 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 205/226 (90.71%), Postives = 210/226 (92.92%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDY IWQPEE EDD+NVTISNSHLLPCDCFLFHLHFRHVLQSNH QE   L+NS
Sbjct: 1   MAMDTLYDYQIWQPEEHEDDINVTISNSHLLPCDCFLFHLHFRHVLQSNHPQELQRLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCD FFASG SILIAVFS TGVAQDFLD AVPDVLSVAADIACNPLNAGRR+L
Sbjct: 61  SLSSFLIPCDAFFASGFSILIAVFSDTGVAQDFLDAAVPDVLSVAADIACNPLNAGRRVL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVL VSPYNEREEI RVLRES+ QAFKTSPASE+AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLAVSPYNEREEIGRVLRESSPQAFKTSPASESAIEGLKTVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHFYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. NCBI nr
Match: XP_008466716.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0059921.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24868.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 202/226 (89.38%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPC+CFLFHLHFRH+LQSNH Q+ H L+NS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQSHYLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSS+LIPCDVFFA+ SSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGR IL
Sbjct: 61  SLSSYLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PL VSVLVVSPYNER+EI +VLRES+ QAFKT PASE AIE LKNVEI VGGELLIGECR
Sbjct: 121 PLTVSVLVVSPYNERQEIGQVLRESSPQAFKTLPASEMAIEDLKNVEIGVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDEL+NGME+TRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELVNGMEITRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.3e-15
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 93  FLDTAVPDVLSVAADIAC----NPLNAGRRILPLAVSVLVVSPYNEREEIARVLRESTAQ 152
           F+   + D+ S  A I      NP + G R LP  +    + P    E++ + L E+   
Sbjct: 136 FIQNHLNDLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGP--GLEQLIQQLAENDPN 195

Query: 153 AFKTSPASETAIEALKNVEIDVGG-ELLIGECRICLDELMNGMEVTRLPCAHVYHRDCIV 212
            + T PAS++AIEAL  V I          +C +C+D+   G E  ++PC H+YH+DC++
Sbjct: 196 RYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLL 255

Query: 213 KWLETSHLCPLCRYAMP 225
            WLE  + CP+CR+ +P
Sbjct: 256 PWLELHNSCPVCRHELP 269

[Close]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 35/92 (38.04%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 136 EEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELL---IGECRICLDELMNGMEV 195
           E++ + L E+    + T PAS++AI+AL  V+  V  ++L   + +C +C+DE  +G +V
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVK--VTKDMLKSEMNQCAVCMDEFEDGSDV 231

Query: 196 TRLPCAHVYHRDCIVKWLETSHLCPLCRYAMP 225
            ++PC HV+H+DC++ WLE  + CP+CR+ +P
Sbjct: 232 KQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261

[Close]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-12
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 115 AGRRILPLAVSVLVVSPYNER--EEIARVLRESTAQAFKTS---PASETAIEALKNVEID 174
           +G R LP +VS +++    ER  E+++++  E++      S   PAS++AIE+L  VEI 
Sbjct: 148 SGLRPLPDSVSEILMGSGFERLLEQLSQI--EASGNGIGRSGNPPASKSAIESLPRVEIS 207

Query: 175 VGGELLIGECRICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMP 225
                    C +C +    G+E   +PC H++H DCIV WL   + CP+CR+ +P
Sbjct: 208 DCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELP 260

[Close]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 115 AGRRILPLAVSVLVVSPYNER--EEIARVLRESTAQAFKTS---PASETAIEALKNVEID 174
           +G R LP +VS +++    ER  E+++++  E++A     S   PAS++AIE+L  VEI 
Sbjct: 132 SGLRPLPDSVSEILMGSGFERLLEQLSQI--EASATGIGRSGNPPASKSAIESLPRVEIS 191

Query: 175 ---VGGELLIGECRICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMP 225
              +G E     C +C +      E   +PC H++H DCIV WL   + CP+CR+ +P
Sbjct: 192 DCHIGSE---ANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 142 LRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRLPCAHVY 201
           L ES      T PA + A+EAL  V+I+      +  C +CLD+L  G +  ++PC H +
Sbjct: 167 LAESDPSRNGTPPAKKEAVEALPTVKIEE-----VVSCSVCLDDLEVGSQAKQMPCEHKF 226

Query: 202 HRDCIVKWLETSHLCPLCRYAMP 225
           H  CI+ WLE    CP+CR+ +P
Sbjct: 227 HSSCILPWLELHSSCPVCRFELP 244

[Close]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL
Match: A0A0A0KDU3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385070 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.7e-116
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPC+CFLFHLHFRH+LQSNH Q+FH L+NS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQFHYLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCDVFFA+ SSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGR IL
Sbjct: 61  SLSSFLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVLVVSPYNER+EI RVLRES+ QAFKT PASE AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLVVSPYNERQEIGRVLRESSPQAFKTLPASEMAIEGLKKVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL
Match: A0A6J1JSE1 (probable E3 ubiquitin-protein ligase ATL45 OS=Cucurbita maxima OX=3661 GN=LOC111487409 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.5e-113
Identity = 205/226 (90.71%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDY IWQPEE EDD+NVTISNSHLLPCDCFLFHLHFRHVLQSNH QE   L+NS
Sbjct: 1   MAMDTLYDYQIWQPEEHEDDVNVTISNSHLLPCDCFLFHLHFRHVLQSNHPQELQRLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCD FFASG SILIAVFS TGVAQDFLD AVPDVLSVAADIACNPLNAGRR+L
Sbjct: 61  SLSSFLIPCDAFFASGFSILIAVFSDTGVAQDFLDAAVPDVLSVAADIACNPLNAGRRVL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVL VSPYNEREEI RVLRES+ QAFKTSPASE+AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLAVSPYNEREEIGRVLRESSPQAFKTSPASESAIEGLKTVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL
Match: A0A5A7V2F0 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001370 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-113
Identity = 202/226 (89.38%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPC+CFLFHLHFRH+LQSNH Q+ H L+NS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQSHYLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSS+LIPCDVFFA+ SSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGR IL
Sbjct: 61  SLSSYLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PL VSVLVVSPYNER+EI +VLRES+ QAFKT PASE AIE LKNVEI VGGELLIGECR
Sbjct: 121 PLTVSVLVVSPYNERQEIGQVLRESSPQAFKTLPASEMAIEDLKNVEIGVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDEL+NGME+TRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELVNGMEITRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL
Match: A0A1S3CS28 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103504063 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-113
Identity = 202/226 (89.38%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPC+CFLFHLHFRH+LQSNH Q+ H L+NS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQSHYLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSS+LIPCDVFFA+ SSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGR IL
Sbjct: 61  SLSSYLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PL VSVLVVSPYNER+EI +VLRES+ QAFKT PASE AIE LKNVEI VGGELLIGECR
Sbjct: 121 PLTVSVLVVSPYNERQEIGQVLRESSPQAFKTLPASEMAIEDLKNVEIGVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDEL+NGME+TRLPCAH+YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELVNGMEITRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL
Match: A0A6J1HJY0 (probable E3 ubiquitin-protein ligase ATL45 OS=Cucurbita moschata OX=3662 GN=LOC111463602 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-112
Identity = 204/226 (90.27%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCDCFLFHLHFRHVLQSNHLQEFHTLVNS 60
           MAMDTLYDY IWQPEE EDD+NVTISNSHLLPCDCFLFHLHFRHVLQSNH QE   L+NS
Sbjct: 1   MAMDTLYDYQIWQPEEHEDDVNVTISNSHLLPCDCFLFHLHFRHVLQSNHPQELQRLLNS 60

Query: 61  SLSSFLIPCDVFFASGSSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRRIL 120
           SLSSFLIPCD FFASG SILIAVFS TGVAQDFLD AVPDVLSVAADIACNPLNAGRR+L
Sbjct: 61  SLSSFLIPCDAFFASGFSILIAVFSDTGVAQDFLDAAVPDVLSVAADIACNPLNAGRRVL 120

Query: 121 PLAVSVLVVSPYNEREEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECR 180
           PLAVSVL VSPYNEREEI RVLRES+ Q FKTSPASE+AIE LK VEIDVGGELLIGECR
Sbjct: 121 PLAVSVLAVSPYNEREEIGRVLRESSPQEFKTSPASESAIEGLKTVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTRLPCAHVYHRDCIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVTRLPCAH YHRDCIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHFYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]

BLAST of CmUC08G147540 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 8.6e-16
Identity = 35/92 (38.04%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 136 EEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELL---IGECRICLDELMNGMEV 195
           E++ + L E+    + T PAS++AI+AL  V+  V  ++L   + +C +C+DE  +G +V
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVK--VTKDMLKSEMNQCAVCMDEFEDGSDV 231

Query: 196 TRLPCAHVYHRDCIVKWLETSHLCPLCRYAMP 225
            ++PC HV+H+DC++ WLE  + CP+CR+ +P
Sbjct: 232 KQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261

[Close]

BLAST of CmUC08G147540 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 138 IARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRLPC 197
           + R+        + T PA++ A+EAL  V+I+    LL  +C +CLD+   GME   +PC
Sbjct: 188 LQRLAENDLNNRYGTPPATKEAVEALAMVKIE--DSLL--QCSVCLDDFEIGMEAKEMPC 247

Query: 198 AHVYHRDCIVKWLETSHLCPLCRYAMP 225
            H +H DC++ WLE    CP+CRY +P
Sbjct: 248 KHKFHSDCLLPWLELHSSCPVCRYLLP 270

[Close]

BLAST of CmUC08G147540 vs. TAIR 10
Match: AT3G13430.2 (RING/U-box superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 138 IARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRLPC 197
           + R+        + T PA++ A+EAL  V+I+    LL  +C +CLD+   GME   +PC
Sbjct: 188 LQRLAENDLNNRYGTPPATKEAVEALAMVKIE--DSLL--QCSVCLDDFEIGMEAKEMPC 247

Query: 198 AHVYHRDCIVKWLETSHLCPLCRYAMP 225
            H +H DC++ WLE    CP+CRY +P
Sbjct: 248 KHKFHSDCLLPWLELHSSCPVCRYLLP 270

[Close]

BLAST of CmUC08G147540 vs. TAIR 10
Match: AT3G13430.3 (RING/U-box superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 138 IARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRLPC 197
           + R+        + T PA++ A+EAL  V+I+    LL  +C +CLD+   GME   +PC
Sbjct: 188 LQRLAENDLNNRYGTPPATKEAVEALAMVKIE--DSLL--QCSVCLDDFEIGMEAKEMPC 247

Query: 198 AHVYHRDCIVKWLETSHLCPLCRYAMP 225
            H +H DC++ WLE    CP+CRY +P
Sbjct: 248 KHKFHSDCLLPWLELHSSCPVCRYLLP 270

[Close]

BLAST of CmUC08G147540 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 136 EEIARVLRESTAQAFKTSPASETAIEALKNVEIDVGGELLIGECRICLDELMNGMEVTRL 195
           E + + L E+    + T PA + A+EAL  V+I+   E L  +C +CLD+   G E   +
Sbjct: 185 EMLLQRLAENDPNRYGTPPAKKEAVEALATVKIE---ETL--QCSVCLDDFEIGTEAKLM 244

Query: 196 PCAHVYHRDCIVKWLETSHLCPLCRYAMP 225
           PC H +H DC++ WLE    CP+CRY +P
Sbjct: 245 PCTHKFHSDCLLPWLELHSSCPVCRYQLP 268

The following BLAST results are available for this feature:

BLAST of CmUC08G147540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885922.1	3.1e-116	92.92	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]
XP_004150446.1	1.2e-115	92.04	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN47723.1 hypothetical pro...	[more]
XP_022990569.1	9.3e-113	90.71	probable E3 ubiquitin-protein ligase ATL45 [Cucurbita maxima] >XP_022990570.1 pr...	[more]
XP_023554199.1	1.2e-112	90.71	probable E3 ubiquitin-protein ligase ATL45 [Cucurbita pepo subsp. pepo]	[more]
XP_008466716.1	1.6e-112	89.38	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0059921.1 E...	[more]

BLAST of CmUC08G147540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	9.3e-15	33.58	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	1.2e-14	38.04	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9SNB6	7.4e-12	34.78	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	2.1e-11	35.59	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q6AVN2	2.1e-11	38.55	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]

BLAST of CmUC08G147540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDU3	5.7e-116	92.04	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385070 P...	[more]
A0A6J1JSE1	4.5e-113	90.71	probable E3 ubiquitin-protein ligase ATL45 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7V2F0	7.7e-113	89.38	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CS28	7.7e-113	89.38	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103504063 P...	[more]
A0A6J1HJY0	2.9e-112	90.27	probable E3 ubiquitin-protein ligase ATL45 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CmUC08G147540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	8.6e-16	38.04	RING/U-box superfamily protein	[more]
AT3G13430.1	1.1e-13	39.08	RING/U-box superfamily protein	[more]
AT3G13430.2	1.1e-13	39.08	RING/U-box superfamily protein	[more]
AT3G13430.3	1.1e-13	39.08	RING/U-box superfamily protein	[more]
AT1G55530.1	1.4e-13	39.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 178..220 e-value: 0.0018 score: 13.6
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 179..219 e-value: 5.0E-7 score: 39.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 178..220 e-value: 8.7E-14 score: 51.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 179..220 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 141..225 e-value: 2.7E-20 score: 73.8
None	No IPR available	PANTHER	PTHR15710:SF120	F6A14.12 PROTEIN-RELATED	coord: 93..224
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 93..224
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 178..220 e-value: 2.68336E-15 score: 65.4009
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 166..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G147540.1	CmUC08G147540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding