Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAAACTCCAAATCCTCCAAGCACAATCCTGTTTGCGAGAAGCTTCTCAGGGCTTTTGGCGTTTATCCTAAAATCATCAAACTCAGTCCTCCACCTGCAAGCCGCCAAGAAGAACAACCCAACTATCCTCACCAAATTCATATTCATGAAGTTAAAGTCGCACCTGAAATGGAGAAAAAACAAAACTCCAACAACAAATTGGGGAATAAATCAGGAAACCAAGATGTAAACGATGTGTTTAGTGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGAAACATGATTCGAGTAGCAAGGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTAAAACTAGCTCCATAAAGTGAGAAAAATCACAACCAAATCATCTCTCTATTTTCAAAATTTTTTTTTTTAATGATTTTAAAAATAACAAAGTGATTTTAACTATTTTAAAATCACTTTCTATGTCTTCTAGGTGTGATTAGTCGTGTTTTAAGTTTGGTTATTGTTAATTATTATTATTTTCTCTGGTTTGGGTTATGGGTTTTACTTTTACTATTGGTTTATTCTGATTTAAACGCGATATGGTGTATTGCACATCCCACCATAAGTATGTAATTCTGTTTTATTATTAAATTGTTTAATTTTCTCATTATTATATCAATGAATACTATTTAATTTAATGTGTTATTTTGTAATTAATAGCATGTATAAACAAATTTATTGCATTCTTCTCAAGAAAAGAGACAAATGTATGGCAAACAATGAACACAAAAGATTATGGGTATTCTTTTGGTTGGGGCCAAAAAGTGAAGGAAGATATATTGGTGGTTGCAATTCCACTATGAAAAAATGAGAGAAAGGGAGAGACTATTAGGATTCTTCAAGAGAATGAGTCTTTTTGTTACAGATTTAGAAATTGTGCGACAAATTTCTTGGAGAAATAAAAGAATGAAAGAAGAGATGAAAGAGGAGAAACGTAATGCAGCTTCATATTGTCCAAACATCAAATTATTAATAAAAAGTTTGATAAAATTTGTCAAATCTTATTTTTTTGACCAAATTATTTACAACTATCTTTTAAACTTTAGGAACTAAAAGTTTAATTTTTGAAACCTCAAGTACCCAAGAGAAGTGAACTAAATGTGTACTTTTGCTTTAAAATCTACAAAATAAAAATAAAATTGAGTTGTTTTCAAATATAGCAAGATGAGCCAAAATATTTATAAATATAGGAAAATTTCACTGTTTATCGGATAGATCGCAATACACTTTTATCATTGGACGATAGACCGCGATAGACTTTTATATCTTTGTGATCGAAGTCTATCGCAGTCTATCATGTTTTATCACAAATAAATAATGAAATTTTTATATATTTGTAAATAGTTTGGTATTTTTTCCCTTTATAATAATTTCTCCAAAATTTATGTTTTTAATGTTGTATCATTTTTCTTTGCTTATATATTTAGTTGATAATTCTATGATGATTTATAATAATCATGTAATCAATATTACTTAGTCGAAGTTTTTTCTATCAATACATTAAGAATTTTATTTAAGAAAATTATGTTAAATAGCAAAATTGTTGAAAATATTTATAATTAGTAACAAAATATCGAATCTATCTGCAATAGACCGATGTGTATGGATGATAAAAGTGTACTTTGATGTGATTTTAGCGCAAGCATACATTGTGATCAATAAATAATAACTTGGGAGTATTCCAAGTATCGTATCCTACGAGACTAGATTTAATTTTGATTCTTTAAAACAATACAAACAATGAAACCAAAGGTAACTTAAAATGAATGATGATTGATTTTAGTGTTGAATAAATTCTGTAACAATAATTGATAAATAAGGATTACAGTCTAGTTTGAACAAAAAAAGAGTTATGCCTACAATGACTTGATGGACGAAAAAAATTTCTTATTCGATCTTGTCTCAAGTTTTTTTAGGGGCTGAAGTAGTTAATTCCATATCTCCATGATTAGCTAAATTTTAGATAATTTTAATGCAATTTCCATATCCTATGGTGGTACCTTATATCTCTAAGGTCACATAACAATCCTATCTCTAGGCTTTTAGTCTCATATTCCTTTGCGAATTAGTTAGCATGTTAAATTAAGTTGTTAATTTAATTTAACAAGTTAACATTAAACTCAACAAAAGAAATGTAAGAGTCACATGATGAGATAGCATTGGTCAAGACATAAGATTATCGGGTAGCTAAATGATTGAATCCTAATTTAGAAATTTAGGTGATAACTAAGGAAGAATGATTGAATTGATCCTTTGGTAGAGGTTTGAGCGGTGGCTGAGGGAATTAGAGGTTGGGTCTTTTCGTTTTGTGGGAAGAGAGTGGAACAACACGAGTCATGGAGTTTTTCCTGCGTGCATTATTTGCCACCGTCTACGTTTCTTGAGTGGTTAGAGGATTAACATCAACAATACACATGAAATTAACAAGACATGGAAATTGGAAGGTGTGGGGGGAACAACAGAGTAGAAAAGCTGGCAATGATTAGATGCTGA
mRNA sequence
ATGGGAAGAAACTCCAAATCCTCCAAGCACAATCCTGTTTGCGAGAAGCTTCTCAGGGCTTTTGGCGTTTATCCTAAAATCATCAAACTCAGTCCTCCACCTGCAAGCCGCCAAGAAGAACAACCCAACTATCCTCACCAAATTCATATTCATGAAGTTAAAGTCGCACCTGAAATGGAGAAAAAACAAAACTCCAACAACAAATTGGGGAATAAATCAGGAAACCAAGATGTAAACGATGTGTTTAGTGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGAAACATGATTCGAGTAGCAAGGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTAAAACTAGCTCCATAAAGTTTGAGCGGTGGCTGAGGGAATTAGAGGTTGGGTCTTTTCGTTTTGTGGGAAGAGAGTGGAACAACACGAGTCATGGAGTTTTTCCTGCGTGCATTATTTGCCACCGTCTACGTTTCTTGAGTGACATGGAAATTGGAAGGTGTGGGGGGAACAACAGAGTAGAAAAGCTGGCAATGATTAGATGCTGA
Coding sequence (CDS)
ATGGGAAGAAACTCCAAATCCTCCAAGCACAATCCTGTTTGCGAGAAGCTTCTCAGGGCTTTTGGCGTTTATCCTAAAATCATCAAACTCAGTCCTCCACCTGCAAGCCGCCAAGAAGAACAACCCAACTATCCTCACCAAATTCATATTCATGAAGTTAAAGTCGCACCTGAAATGGAGAAAAAACAAAACTCCAACAACAAATTGGGGAATAAATCAGGAAACCAAGATGTAAACGATGTGTTTAGTGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGAAACATGATTCGAGTAGCAAGGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTAAAACTAGCTCCATAAAGTTTGAGCGGTGGCTGAGGGAATTAGAGGTTGGGTCTTTTCGTTTTGTGGGAAGAGAGTGGAACAACACGAGTCATGGAGTTTTTCCTGCGTGCATTATTTGCCACCGTCTACGTTTCTTGAGTGACATGGAAATTGGAAGGTGTGGGGGGAACAACAGAGTAGAAAAGCTGGCAATGATTAGATGCTGA
Protein sequence
MGRNSKSSKHNPVCEKLLRAFGVYPKIIKLSPPPASRQEEQPNYPHQIHIHEVKVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAKRRLGSISSKKHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTKTSSIKFERWLRELEVGSFRFVGREWNNTSHGVFPACIICHRLRFLSDMEIGRCGGNNRVEKLAMIRC
Homology
BLAST of CmUC07G126770 vs. NCBI nr
Match:
KAG6606435.1 (hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 0
Query: 1 MGRNSKSSKHNPVCEKLLRAFGVYPKIIKLSPPPASRQEEQPNYPHQIHIHEVKVA-PEM 60
MGRNSKSSK NPVCEKLL+A G+YP+I+K PPP ++E+P H + +++ E+
Sbjct: 1 MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPP--NRQEEPKPAALAHSYSLQIQDDEV 60
Query: 61 EKKQNSNNKLGNKSGNQDVNDVFSDYINRAKRRLGSISSKKHDSSSKGKENLKDDRRFSD 120
EK+Q ++DVNDVFSDYI+RAKRRLGSISSK+HD SS+GKEN+K+D RFSD
Sbjct: 61 EKEQKP---------SEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNRFSD 120
Query: 121 YIIRARNKLKATSSSV 136
YI+RARNKLKATSSSV
Sbjct: 121 YIVRARNKLKATSSSV 125
BLAST of CmUC07G126770 vs. NCBI nr
Match:
KAA0057288.1 (hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK13444.1 hypothetical protein E5676_scaffold496G00660 [Cucumis melo var. makuwa])
HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27
Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 1 MGRNSKSSKHN-PVCEKLLRAFGV--YPKIIKLSPPPA---SRQEEQPNYPHQIHIHEVK 60
MGRN KSS N P CEKLL+AFG+ PKI KLSP + + ++Q N I++H
Sbjct: 1 MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHEP 60
Query: 61 VAPEMEKKQNSNNKLGNKSGNQD-VNDVFSDYINRAKRRLGSISSKKH---DSSSKGKEN 120
E++ + +NK G G++D VNDVFS+YINRAKRRLG+I+SKKH DSS KGKEN
Sbjct: 61 AIMEIKTHSSKSNKYG--GGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGKGKEN 120
Query: 121 -LK-DDRRFSDYIIRARNKLKATSSSVGFTKTSS 143
LK +DRRFSDYI RAR+KL+ATSSSVG TKT S
Sbjct: 121 SLKAEDRRFSDYIARARDKLRATSSSVGLTKTKS 152
BLAST of CmUC07G126770 vs. NCBI nr
Match:
KAG6571440.1 (hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 127.9 bits (320), Expect = 1.0e-25
Identity = 75/139 (53.96%), Postives = 91/139 (65.47%), Query Frame = 0
Query: 1 MGRNSKSSKHNPVCEKLLRAFGVYPKIIKLSPPPASRQEEQPNYPHQIHIHEVKVAPEME 60
MG+N+KSSK + VCE+ L+A G+ P + HE +APEM+
Sbjct: 1 MGKNTKSSKRSSVCERFLKALGMCPSPTR---------------------HEEPLAPEMD 60
Query: 61 KKQNSNNKLG---NKSGNQDVNDVFSDYINRAKRRLGSISSKKHDSSSKGKENLKDDRRF 120
KKQ N K + ND FSDYINRAKRRLGSISSK+HD SSKGKENLK+DRRF
Sbjct: 61 KKQRLNINGAPQMEKKQKLEPNDAFSDYINRAKRRLGSISSKRHDPSSKGKENLKEDRRF 118
Query: 121 SDYIIRARNKLKATSSSVG 137
+DYIIRARN+L+ATSS+VG
Sbjct: 121 TDYIIRARNRLRATSSTVG 118
BLAST of CmUC07G126770 vs. NCBI nr
Match:
KGN47879.1 (hypothetical protein Csa_004306 [Cucumis sativus])
HSP 1 Score: 119.0 bits (297), Expect = 4.8e-23
Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 0
Query: 1 MGRNSKSSKHN-PVCEKLLRAFGV--YPKIIKLSPPPASRQ----EEQPNYPHQIHIHEV 60
MG+NSKSS N P CEKLL+AFG+ PKI KLS + + ++Q N I++H
Sbjct: 1 MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60
Query: 61 KVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAKRRLGSISSKKH--DSSSKGKE-N 120
MEK +S N VN FS+YINRAKRRL +++SKKH DSSS+GKE N
Sbjct: 61 PAV--MEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSRGKENN 120
Query: 121 LK-DDRRFSDYIIRARNKLKATSSSVGFTKTSS 143
LK +DRRFSDYI+RARNKL++TSSSVG KT S
Sbjct: 121 LKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKS 151
BLAST of CmUC07G126770 vs. NCBI nr
Match:
CAB4291760.1 (unnamed protein product [Prunus armeniaca] >CAB4322075.1 unnamed protein product [Prunus armeniaca])
HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 31 SPPPASRQEEQPNYPHQIHIHEVKVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAK 90
SP + E Q N+ + +HE + AP+++ + G K G D+ND FS+YI +AK
Sbjct: 176 SPLKGAVGEAQHNHNAAVKVHEAE-APQVKNE-------GKKPGGPDINDTFSEYIKQAK 235
Query: 91 RRLGSISS---KKHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTKTSSIKFE 147
++ ++SS + D +K KE++KD FSDYI RA+NK K+T SS+G K +S K E
Sbjct: 236 IKIRTMSSNNISESDDDAKKKESVKD--HFSDYIHRAKNKFKSTPSSLGAGKNASFKRE 284
BLAST of CmUC07G126770 vs. ExPASy TrEMBL
Match:
A0A5D3CQZ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00660 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28
Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 1 MGRNSKSSKHN-PVCEKLLRAFGV--YPKIIKLSPPPA---SRQEEQPNYPHQIHIHEVK 60
MGRN KSS N P CEKLL+AFG+ PKI KLSP + + ++Q N I++H
Sbjct: 1 MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHEP 60
Query: 61 VAPEMEKKQNSNNKLGNKSGNQD-VNDVFSDYINRAKRRLGSISSKKH---DSSSKGKEN 120
E++ + +NK G G++D VNDVFS+YINRAKRRLG+I+SKKH DSS KGKEN
Sbjct: 61 AIMEIKTHSSKSNKYG--GGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGKGKEN 120
Query: 121 -LK-DDRRFSDYIIRARNKLKATSSSVGFTKTSS 143
LK +DRRFSDYI RAR+KL+ATSSSVG TKT S
Sbjct: 121 SLKAEDRRFSDYIARARDKLRATSSSVGLTKTKS 152
BLAST of CmUC07G126770 vs. ExPASy TrEMBL
Match:
A0A0A0KG94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23
Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 0
Query: 1 MGRNSKSSKHN-PVCEKLLRAFGV--YPKIIKLSPPPASRQ----EEQPNYPHQIHIHEV 60
MG+NSKSS N P CEKLL+AFG+ PKI KLS + + ++Q N I++H
Sbjct: 1 MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60
Query: 61 KVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAKRRLGSISSKKH--DSSSKGKE-N 120
MEK +S N VN FS+YINRAKRRL +++SKKH DSSS+GKE N
Sbjct: 61 PAV--MEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSRGKENN 120
Query: 121 LK-DDRRFSDYIIRARNKLKATSSSVGFTKTSS 143
LK +DRRFSDYI+RARNKL++TSSSVG KT S
Sbjct: 121 LKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKS 151
BLAST of CmUC07G126770 vs. ExPASy TrEMBL
Match:
A0A6J5VR30 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS52131 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 8.0e-08
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 31 SPPPASRQEEQPNYPHQIHIHEVKVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAK 90
SP + E Q N+ + +HE + AP+++ + G K G D+ND FS+YI +AK
Sbjct: 176 SPLKGAVGEAQHNHNAAVKVHEAE-APQVKNE-------GKKPGGPDINDTFSEYIKQAK 235
Query: 91 RRLGSISS---KKHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTKTSSIKFE 147
++ ++SS + D +K KE++KD FSDYI RA+NK K+T SS+G K +S K E
Sbjct: 236 IKIRTMSSNNISESDDDAKKKESVKD--HFSDYIHRAKNKFKSTPSSLGAGKNASFKRE 284
BLAST of CmUC07G126770 vs. ExPASy TrEMBL
Match:
A0A6P5RSE8 (uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE=4 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 31 SPPPASRQEEQPNYPHQIHIHEVKVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAK 90
SP + E N+ + +HE + AP ++ + G K G D+ND FS+YIN+AK
Sbjct: 175 SPLKGAVGEALHNHNAAVKVHEAE-APRVKNE-------GKKPGGLDINDTFSEYINQAK 234
Query: 91 RRLGSISSKK---HDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTKTSSIKFE 147
++ ++SS K D +K KE++KD FSDYI RA+NK K+T S++G K++S K E
Sbjct: 235 IKIRTMSSNKISDDDDDAKKKESVKD--HFSDYIHRAKNKFKSTPSNLGAGKSASFKRE 283
BLAST of CmUC07G126770 vs. ExPASy TrEMBL
Match:
A0A5E4EGF6 (PREDICTED: PHAVU_001G147900g OS=Prunus dulcis OX=3755 GN=ALMOND_2B019859 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 2.3e-07
Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 0
Query: 31 SPPPASRQEEQPNYPHQIHIHEVKVAPEMEKKQNSNNKLGNKSGNQDVNDVFSDYINRAK 90
SP + E N+ + +HE + AP+++ + G K G D+ND FS+YIN+AK
Sbjct: 166 SPLKGAVGEALYNHDAAVKVHEAE-APQVKNE-------GKKPGGLDINDTFSEYINQAK 225
Query: 91 RRLGSISS---KKHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTKTSSIKFE 147
++ ++SS + D +K KE++KD FSDYI RA+NK K+T S++G K++S K E
Sbjct: 226 IKIRTMSSNNISESDDDAKKKESVKD--HFSDYIHRAKNKFKSTPSNLGAGKSASFKRE 274
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6606435.1 | 1.3e-33 | 61.76 | hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0057288.1 | 1.1e-27 | 57.79 | hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK134... | [more] |
| KAG6571440.1 | 1.0e-25 | 53.96 | hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN47879.1 | 4.8e-23 | 53.59 | hypothetical protein Csa_004306 [Cucumis sativus] | [more] |
| CAB4291760.1 | 1.6e-07 | 39.50 | unnamed protein product [Prunus armeniaca] >CAB4322075.1 unnamed protein product... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CQZ7 | 5.3e-28 | 57.79 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0KG94 | 2.3e-23 | 53.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1 | [more] |
| A0A6J5VR30 | 8.0e-08 | 39.50 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS52131 PE=4 S... | [more] |
| A0A6P5RSE8 | 1.4e-07 | 39.50 | uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE... | [more] |
| A0A5E4EGF6 | 2.3e-07 | 38.66 | PREDICTED: PHAVU_001G147900g OS=Prunus dulcis OX=3755 GN=ALMOND_2B019859 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
