
CmUC06G116020 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAATTCATTAGTCAAAAAATCAGGAAAGGTAATATGGAACACTTTGGAGTCCGAACATCGAGGAGACGATGCAGGCAATAAGAAGTATGTTGTTAGAAAATTTCTACAATTCCAAATGATGGATGATAAACTAATTTTGGATCAAGTTCATGAGTATGAGAATCTGGTGGCGAATGTGTTGTCCGAAGGTATTGAAATGTGAAAAATTCTCCCAGTGAATGTGTTGCTGAAGAAATTTCCTCCCTCCTGGAGCAACTACTGTAATCATCTTAAACATAAGAAAAATGATTTAACTTTACAGAAATTGATCAATCACATGCACATGGAAGAAGCCAATCGATAAAAAAATAAGTTGATTTCTCAAACTTTGAATTCAGTAAATGCTAACTTAATTAAATCTTTTGTTGCAAACAACGACATGTTTAAAAATAAAGGAAAGTAAAATACGAATAGTATGTCACAACAAAAGAAGGGACATTAGTTCACGGCTAGTGGTCGTAGAATTGAAAAATCCAAACTAGTGTGTTATGTGTGTGGAAAGCCAGGACATAAGTCAAATCAATTCAACCAAAGGAAAGGAAGGCCTGATAAGAAACTAGCTCCACAAAACCAACCTTGCTGAGCAAGATGACGTTATTGTTGTTGTGGTTGTGGAAGCAAATCTGTTGGAGAACAAGTCTGATTGGATTCTTGATATTGGAGCCTCAAGGCCCTTCTGTTCAAATCGAGACTTGTTCCATAAGTTTGAAGATTCTACCAATCGAGAATTTATATTCATGGGTAACTCTACCACTGCAAAAACTTATCTTTGGAAAAACTCTTTCGTTAAGTAACGTTTTGATTTTATCTTCATTTGGTAGGAATTTGGTGTTTGGAAATCTATTGAACCGGGTTGGGATTAGAATTGTATTTGAAGTTGACAAGGTTCCTATTTCAAATTTAATGAATGTAAGTGTTTCTAATTCTGCTTATATAGTTGAATCTATTGATGTGCGACATGTAAGATTAAGTCATGTCAATTTCACATCGATAAAAAAAAAAACTTAAAGCATTAAATTTGATTAATGCATCTGAAACACATGAAATTGGTAAATGTGCTATATGTGTAGAAGCAATGTTTACCAATAAACCTTTTAAACATGTCACCACTAGATGTTCAAAATTGCTTGAATTAGTTCATACTGACTTGGCTAATTTAAAAAACACTGCTAGTAGAGGTGGGAAAAATTACTATATCACCTTTATTGATGATTTTTTAGGTATACTAAAATTTATCTTTTAAAAAAAAAGGATGAAGCATATGATATGTTTTTTAAATAAAAAGAAAAAGTAGAAAATCAATTAGATAAGCATATATCCCATGATCAAAGTAGATAATGAATAAGTTCAAAAACATCTTATAGTGATAAAATATCTGTTTTTTTTTTTTTTTTTTTTTTTCCTTCTTCTTCTGATAGTATGCATGAAATTGAACCTAGAAGAAGTAAAGGACAAAAACCTGAGAAAAAATTCAGTCCTGATTTCTTAACTACTTTTTAAGTTGAAAGGTCAATTGATATAGATAATCAATGTGCATGTATGTATTTAATAGATGAGGATTCCAAAACTTATCAAGAGGCCTTAAGTTCTGTAGACTTATGGAAAGAAGCTATTAAGAGTATATTGGGCTCTGTAACTATGAGTCAAACTTCGGACTTGGTAGATCTCCCTAAAGGAAGTAAACCAATTAGATACAAAGAATTTTCAAAAAGAAAATTAGACCTGGTGGATTAATTGAAAGATATAAGGTTAGATTAGTAGCAAAAGAGTATACACAAATGCAAGGTATTGACTATGTTGATACGTATTCTCATTAGGGGTGATAGTCGGTTCGATTTTGTCGGTTTTGGGGTTAACTAAGAACCAAACTGAACCAATCGATTTTACAAAGAAGAGATCCAAACCAATGTTTAATAAAGAACAAAACCAATGGATTGATTTGTATTTGGTTACATTTATTATAAGTTTGGTTCTTGATTTTTGATATTTTCTTTTTTTCTTCCAAATTTCAATTTTTATTTCCAATTTTGTTTTTAATTGGTTCTTTTTGCTAATTTTAAATTAAAATTAAGTCCATTTTTTTTATATAGATTGAAATTGGACATTTTTTTTCTCGGAACTTTCTAAATAAAAAACATACACACTCCATAATAATTGGTCTTTTTCTAAACAATACATATATATGCACCATAATAATTAAAACAATAAAAGATACTCAATGTCAGAGTTTATTTTTAAAGGTATATATACCATCGATTTTGATTGGTTTTTCCAATCGAATTCCTGTCCAAATCAATACTTTTTTATTTTCTCCAAATACAAACCAAGATAGTCTTCTCAAAATCTCAAAAGTTACTAAGTTGGAATCTCATTCTAACTAAGGATTCTTGTGGTTCCTAAGAATCCAGCTACACAAGAACCAAGAATGGAGAGCTCAATAAAGTCGACAGAAAAGTCTCCAGAGTCGCTATAGTCTAGGCTCTCACTCACGTTATCCGTCCTGTGACTCTATTACGTTACTTGCCCTATTAACTAGCCAGAGGCAACCATGAAAATTCATTAATTTCAACCTGCCTCAAGTTCTCTATTGTACAGCGAAACTCGCTAATAATATATATATGTTTCCCCAAGAACCAGACCTACATGCAAGAAGAATGTATATCTCCATTCGTCCTAACCAAATAGTCGAATCTATCTCTCAGCGATTAATTCTTTTCTCCACTAATAAACATTTCCCAACTAGTCTGCCCAATCGATTTTGTAAGATTGGCTAATTCAAAGGGGTTAATTTGGTTCAAAGTTGTTGGAACAAATCTTTTTCGCCTTCATCCTTTTGTTCACCCACCTTAGACGAGGTCGATCCCATGGCTATGATGGTCATTCTAGAGGTCACGCAACAACTTCCCACTTCGCCCATGAATCCTACCAATTCCTAGGGCCGTTCAACCCCTATCAAAACCCCAATCAACAACTAAGGGCGGCTCAAGAGGCACTGCCAGAGGCTCCAGCACCAGCAGAAGTTCTGAACCTCGATCTGCATCCCCTAAGGCACTTCGAAGGGAAATTCACACGTTAGTAACGCAACAACTATGTTCAGAGTGTGAAAGAAGGCGAGTGCAGCCCCCACTTTCCAAAAATGAGAAATATGCATTCGGATGTAGCCAATAAAAATCTTTCTCATGATCTGGAAATATCCACAGAGATGGATGTCAAACCCCTCCACGAATGGATGGAGCAGATTAAGGATAACCCTGAAATCTGGTAG ATGACGAATTCATTAGTCAAAAAATCAGGAAAGGTAATATGGAACACTTTGGAGTCCGAACATCGAGGAGACGATGCAGGCAATAAGAAGTATGTTGTTAGAAAATTTCTACAATTCCAAATGATGGATGATAAACTAATTTTGGATCAAGTTCATGAGTATGAGAATCTGGTGGCGAATGTGTTGTCCGAAGATGACGTTATTGTTGTTGTGGTTGTGGAAGCAAATCTGTTGGAGAACAAGTCTGATTGGATTCTTGATATTGGAGCCTCAAGGCCCTTCTGTTCAAATCGAGACTTGTTCCATAAGTTTGAAGATTCTACCAATCGAGAATTTATATTCATGGGGCCGTTCAACCCCTATCAAAACCCCAATCAACAACTAAGGGCGGCTCAAGAGGCACTGCCAGAGGCTCCAGCACCAGCAGAAGTTCTGAACCTCGATCTGCATCCCCTAAGGCACTTCGAAGGGAAATTCACACCCAATAAAAATCTTTCTCATGATCTGGAAATATCCACAGAGATGGATGTCAAACCCCTCCACGAATGGATGGAGCAGATTAAGGATAACCCTGAAATCTGGTAG ATGACGAATTCATTAGTCAAAAAATCAGGAAAGGTAATATGGAACACTTTGGAGTCCGAACATCGAGGAGACGATGCAGGCAATAAGAAGTATGTTGTTAGAAAATTTCTACAATTCCAAATGATGGATGATAAACTAATTTTGGATCAAGTTCATGAGTATGAGAATCTGGTGGCGAATGTGTTGTCCGAAGATGACGTTATTGTTGTTGTGGTTGTGGAAGCAAATCTGTTGGAGAACAAGTCTGATTGGATTCTTGATATTGGAGCCTCAAGGCCCTTCTGTTCAAATCGAGACTTGTTCCATAAGTTTGAAGATTCTACCAATCGAGAATTTATATTCATGGGGCCGTTCAACCCCTATCAAAACCCCAATCAACAACTAAGGGCGGCTCAAGAGGCACTGCCAGAGGCTCCAGCACCAGCAGAAGTTCTGAACCTCGATCTGCATCCCCTAAGGCACTTCGAAGGGAAATTCACACCCAATAAAAATCTTTCTCATGATCTGGAAATATCCACAGAGATGGATGTCAAACCCCTCCACGAATGGATGGAGCAGATTAAGGATAACCCTGAAATCTGGTAG MTNSLVKKSGKVIWNTLESEHRGDDAGNKKYVVRKFLQFQMMDDKLILDQVHEYENLVANVLSEDDVIVVVVVEANLLENKSDWILDIGASRPFCSNRDLFHKFEDSTNREFIFMGPFNPYQNPNQQLRAAQEALPEAPAPAEVLNLDLHPLRHFEGKFTPNKNLSHDLEISTEMDVKPLHEWMEQIKDNPEIW Homology
BLAST of CmUC06G116020 vs. NCBI nr
Match: KAA0026033.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 143.3 bits (360), Expect = 2.2e-30 Identity = 73/138 (52.90%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of CmUC06G116020 vs. NCBI nr
Match: XP_022153695.1 (uncharacterized protein LOC111021147 [Momordica charantia]) HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28 Identity = 82/192 (42.71%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CmUC06G116020 vs. NCBI nr
Match: KAA0048277.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 6.1e-28 Identity = 75/162 (46.30%), Postives = 92/162 (56.79%), Query Frame = 0
BLAST of CmUC06G116020 vs. NCBI nr
Match: KAA0049696.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 125.2 bits (313), Expect = 6.3e-25 Identity = 74/182 (40.66%), Postives = 91/182 (50.00%), Query Frame = 0
BLAST of CmUC06G116020 vs. NCBI nr
Match: KAA0049764.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 8.2e-25 Identity = 73/184 (39.67%), Postives = 92/184 (50.00%), Query Frame = 0
BLAST of CmUC06G116020 vs. ExPASy TrEMBL
Match: A0A5A7SN16 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00180 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 73/138 (52.90%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of CmUC06G116020 vs. ExPASy TrEMBL
Match: A0A6J1DHJ4 (uncharacterized protein LOC111021147 OS=Momordica charantia OX=3673 GN=LOC111021147 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 82/192 (42.71%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CmUC06G116020 vs. ExPASy TrEMBL
Match: A0A5A7U214 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002010 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.9e-28 Identity = 75/162 (46.30%), Postives = 92/162 (56.79%), Query Frame = 0
BLAST of CmUC06G116020 vs. ExPASy TrEMBL
Match: A0A5A7U6B5 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00400 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.0e-25 Identity = 74/182 (40.66%), Postives = 91/182 (50.00%), Query Frame = 0
BLAST of CmUC06G116020 vs. ExPASy TrEMBL
Match: A0A5A7U3D3 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001170 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.0e-25 Identity = 73/184 (39.67%), Postives = 92/184 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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