CmUC06G108480 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G108480
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein cornichon homolog 4-like
Location	CmU531Chr06: 390452 .. 395332 (-)
RNA-Seq Expression	CmUC06G108480
Synteny	CmUC06G108480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGGTTCTTTCTCTATTCCATCTCTCGCCAATGGCTTGCAATTTTTTTGTGCCATCTTTCATTCTCGTTGTTGAATGATTTTCTGCTGAAACTGTAGGTTTGCACTTCCGATTAATAGTTTAATTATAGATGAATGTCGAACTTCCGACTCCTTTCTTTTCTTGAAATAGAGGAAGTTTACAGAGAGATAGTAGTAACAAAATGTGTGTGAACGAAGATTGCAAGAAGTAATATGTCGAACAAGATTATTCAAGCTGTATCAAAATTGTCTCTGCAAAAAAGTCCGTTATAAGGGCTTTTCTTGCTGCTTTAATTACACAACTTAAAGCGTATTCATGCAAATCTTTTCTGGTTGCTTTTAACTGTTTATGTTTGCATGATTAGAAATCTGCCTAACAAAACGAAACAAAAAAAATCATGATTTGAGTTACTGCTGTGCTGCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTTCTGGTTTCCTGAATCCATTAACTCTACTGAACAACATTATTTTACTATAGGTCTCTGGGATCATTATTGAAGGATGGTACATGAAATTCAACTGGCTATGAAAGCTTGATATTTCAAAAACGGATTTTCTCGTCCAACTGACCATGGTTTGTTTGGTAGTGATTTTACATTGAGTTTGAAAAATGTTGTTTAGAGGTTTGAAAGTTATATGCCTTTTATATGCTTGACATTTCAGAATAAGTTGATTTTGAGGGACAGAAGCTAAACTGGCTTGAATATTGTAAATTCGTAGTTGATTGGTTAGTCCCCGATATAGCATATGGAAAAGATCTGCCTTAGGAAGAAATATAATGTAGAACTAAATGAACTATTTTCTTCCCAATAAAGACAGTTGAGTGGATTCTAAACATCTGATTTGTTTGAGAGGTAATTGATTTCTATTTCATGATCTGATGGGCTGATTACAATTTGGTTTGTATTTTCTAAGAGAACCCAGTAATTGTAAAGAAAAGCCTAGTGTAGTTTTTGGACAATAGTAATTTGGTTTCAAACTTCTATCTTTTGAGTTGGTCTAGTTACTTATTGGATCATGTGATAAATAAAAGGAACCTTTGGGAGAATGGGCTTGAACTCCGTGGTAGTCACCTAGTTGGGATATTGAAATTCTAATTCCTTCGAGAGAATGACAACCAAATATTAGATTGTTGAGGATTCCACGTTAGAAAATTCAAGGGACTTCTTCTTGTTGCCGGATGGTTCTAAGATAGACTCCATGTTATCTAATATACATAAAAATTGTTCTCTTTCAACTTTGCTTGAGCACATTTGAATTCTGTACTCATGAATTTCCTTGATCTAACACAGTCATAAGGCTCGGTCTTTTAAATTCTAAATCTTGGCCTTGCCTTAATTCCATGGTGCGAAATACAAATAAATGCAACTTGACAACAGAGATTAAATCACTTGGAAGGATTCTTACTTGAGTGGAATTTGTAACTCCATTATTTTCAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGTACATACATATACTGATACTTTTGACATTTATGATGCTGATTTTATGTTCATTATAATCTATAAATTGTGTAACAATATTTATTACTTGAATTTGTTTGCAGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAGTTAAGTATGTTCTAATGAGTTTGTTTATTTTAAAATCTGATGAACTTATTACTAACACTGTACATTATAGAAAGACATGGATTGTGGATAGAAATAAGCAACAAAAATGCCTCTGCTTTCCTTTGAGTTTAAAAGGTTTGTGTATTGATTATACCGCTACATAGAGGATTTACCAAAGCTATGACTTCATAAAATAATAAATTTAAAATTGTATTTTCTTGAACTTTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTTCAACCGTATTCAATGTCCCTAGACATTAATAGTGTCTAATAGATCTCTAAATTTTCAATCATGTATCTAATTGTCCTTTGACTTATTCAATAGCTTTTAAAAATTCACTATCTACAAGACACAAAATTAAAATTTATGATTCATAAAATTTTGAATATGTCGAGGCTTTATTAAACATAGTAAGACTCTTGAGACACGAAATATTAATTGCCCTTCAGGTTATAACTTTGAAGATGAAGAAGAGATGAAGAAGGGTTGATCACGTTTTTGTTCTCTATTCTCTCTTTGGTTACTCTAAGCAAAGCAACATTCCTTCTTGATTGTAATCCATCTTTAACAAGTTCACATTCGAGGTAGTTGAATTAATTTTGGGGAAGAATAGGCTTACATGATTCACACCAAAGTCATGTTGAATTGTTTTCAAGGTAGCGGTGGTCCACGACACAACGATTTATTTATGATCAACACAATTTTAATAATCTCTCGTCCTCGTTATCAATATAAACCTTTATTTGTTAACTCATTATCCCATTTGTGTTTATAAACCAAACAAATAGGAATGCCACAAAGGAAATCCTAACATTAATGATTGGTAATTTACATATTCTAATTTGTGTTCGTTAAACACAAAAGAAATAGGAATGTACAGGGTTATTTTAAACAATAATGTTATTTTTAAAAAAAATTCGAAAAATAGGGTGCTTTAGAAACTAATGACAAAAGTAGGGTGGTTTGGAAAATAATTTGTAAATTGGGGTGGTGAAATCGTGTACCGGGTACACGATTTCAGTCAATTTTTTTCGTGGTCATTGTCATGTAAGTAAGTCGTGGACCCGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGATTTCGGCCAAACTCGTGGACCCGGTCCACGATTTCGCCCGTACTCGTAGACCTGGTCCACGAGTGTTAACCAAACTCGTGGACCGGGTCCACGATTTATGCCCAGTGAGTTACACCAATTATCATGCTATAATCGCGGGGAAGGAGGAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCAGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCAGATAGTATTTATGGTTCGAGTTTTGATCAAAAAGACTTCTTACCCCCGTTCTTTTCTCATGATACGTCCAAAAACGTCCGGTTTTTTTCCCATGATAAATAAGTTAATTAATTAATTACCCACTTAAATGAAATTTTGCTTATTACTTGTGTTCATCAATTATTGTTTAGTTTCATTGATTCTTAATTTTTAAATTTATTCATGCATGCAAAAGGGGTATTTTAAAGAATAATGTTATTCTAAAAAAAAAATTCGAAAAATAGGGTATACATATTTAAATTTGTTCATTCATGCAAAACAAAACGTATACATATACAAATTTATTCATTCATGCAAAACAAAACGTATATAACTATTGCATATTTATAAGATAATTAGAAAGGAAAATGTATATGCATACGTATATGGCGGCGGCGGCGGTAGCAACGGTGGTACTGGCGGCGGCGGCAGTGGAGGCGGCGGCGGCGGCGGCGGAGGCGGAACGAAAAGAAGAAGAAAATTGACAGCGACAATGACAAACGAGAACTGAAATAAGAGAAAGGAGAGAAAGGAGGAAAGAAATGAAGAGTGAAAGGAGAGATATGAGGAGAGAAATGAAGAATGAAAAGAGAGAAATGAAGATGGTGGAAATGAGAGAAATGGAGAATGGGAGCTGCCGGTCGGAAATTTAAAGAGTGGAACTCGTGGACGGGGTCCACGATTACCGAAATCGTGGACCCCGTCCACGAGTTCGGTCAATGCATGCCTCTGCATGCAGAGGCATGCAGACTGGAAATCGTGGACCCGGTCCACGATTTCACAGAATCGTGGACGGGGTCCACGATTTCACAACCCTATTTTTCCAAATTCTTTCTCCCCCACCCTATTTTTCCAAATTCTTTCTCCCCCACCCTATTTTTCGAATTCTTTTTTAAAAAACCATTATTTTAAAAAAAAATTCGAATGTACAAGATGATCCTAAGAGTAAATGAGTAAGTGATGCTAATAATTAACATATTGTAACTCTGACAATGAATCTAAAGAAACCTATCACAAATCAATTCTTCCCTCCAAAAAGCATTCATCATGTCGATAAACTCTTGAGCCTTCTTCTCTATATCATCTTGAAGCCCTTCTTCACAATCTTCTTCAAAACTATCATCAATACAAATTTCATCACTACTATTCATCTCATTGCTATGTCTACTACAATCTTTACAGCTTTCTACCAGTTCTTCTATCCCTTCTCCTTTGCTCAATAACCGCTTAAACTTCTCGCTGAACAGGATGAAAATGATGGCATTAGATGCAAGGAATACCGATGCACGACTCGATTTCACCACCCGAATGATTTCGACCAATTGAAGGACGATGTTTCGGTGCTTGGAACTCACCAAGGGGGGCAAGAAACAGGAGAAGAAGAAGAAGGAAAGGAAGAAACTGGATGCAATGATGATGCAAAGAAAAAATGCTTGAAGTTTCTTCATGCCCCTTCAATCTAAACAACAACCAATTATATTATATCTTTAATTCT

mRNA sequence

ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAGTTAAGTATGTTCTAATGAGTTTGTTTATTTTAAAATCTGATGAACTTATTACTAACACTGTACATTATAGAAAGACATGGATTGTGGATAGAAATAAGCAACAAAAATGCCTCTGCTTTCCTTTGAGTTTAAAAGGTTATAACTTTGAAGATGAAGAAGAGATGAAGAAGGGTTGATCACGTTTTTGTTCTCTATTCTCTCTTTGGTTACTCTAAGCAAAGCAACATTCCTTCTTGATTGTAATCCATCTTTAACAAGTTCACATTCGAGGTAGTTGAATTAATTTTGGGGAAGAATAGGCTTACATGATTCACACCAAAGTCATGTTGAATTGTTTTCAAGGTAGCGGTGGTCCACGACACAACGATTTATTTATGATCAACACAATTTTAATAATCTCTCGTCCTCGTTATCAATATAAACCTTTATTTGTTAACTCATTATCCCATTTGTGTTTATAAACCAAACAAATAGGAATGCCACAAAGGAAATCCTAACATTAATGATTGGTAATTTACATATTCTAATTTGTGTTCGTTAAACACAAAAGAAATAGGAATGTACAGGATGATCCTAAGAGTAAATGAGTAAGTGATGCTAATAATTAACATATTGTAACTCTGACAATGAATCTAAAGAAACCTATCACAAATCAATTCTTCCCTCCAAAAAGCATTCATCATGTCGATAAACTCTTGAGCCTTCTTCTCTATATCATCTTGAAGCCCTTCTTCACAATCTTCTTCAAAACTATCATCAATACAAATTTCATCACTACTATTCATCTCATTGCTATGTCTACTACAATCTTTACAGCTTTCTACCAGTTCTTCTATCCCTTCTCCTTTGCTCAATAACCGCTTAAACTTCTCGCTGAACAGGATGAAAATGATGGCATTAGATGCAAGGAATACCGATGCACGACTCGATTTCACCACCCGAATGATTTCGACCAATTGAAGGACGATGTTTCGGTGCTTGGAACTCACCAAGGGGGGCAAGAAACAGGAGAAGAAGAAGAAGGAAAGGAAGAAACTGGATGCAATGATGATGCAAAGAAAAAATGCTTGAAGTTTCTTCATGCCCCTTCAATCTAAACAACAACCAATTATATTATATCTTTAATTCT

Coding sequence (CDS)

ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAG

Protein sequence

MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFVMDDLERRNFGEELG

Homology

[Close]

BLAST of CmUC06G108480 vs. NCBI nr
Match: XP_008460129.1 (PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]

BLAST of CmUC06G108480 vs. NCBI nr
Match: XP_008460127.1 (PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]

BLAST of CmUC06G108480 vs. NCBI nr
Match: XP_022152825.1 (protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831.1 protein cornichon homolog 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 6.1e-35
Identity = 86/126 (68.25%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQRF+KM
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKM 119

[Close]

BLAST of CmUC06G108480 vs. NCBI nr
Match: XP_022152838.1 (protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841.1 protein cornichon homolog 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 116
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQR +  
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRMISS 114

[Close]

BLAST of CmUC06G108480 vs. NCBI nr
Match: XP_008375821.1 (protein cornichon homolog 4-like [Malus domestica] >TQE03377.1 hypothetical protein C1H46_011028 [Malus baccata])

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-20
Identity = 61/121 (50.41%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 4   LFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVH 63
           L+ WL + F ++ L+ ILGYQ++CLVDLE DYIN +DS+SR+N VI+ EFI Q V  F+ 
Sbjct: 4   LWTWLLSFFFILALLCILGYQLVCLVDLEYDYINPYDSSSRINNVILPEFIIQGVLCFIL 63

Query: 64  LPAPIG-SCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFV 123
           L A      F    H Y +++   Y+ + HL DVTEIYNQ+  EKKQRFLK+ Y L+LF+
Sbjct: 64  LIARHWFMLFMALPHLYYNVN--LYMTRRHLVDVTEIYNQLSWEKKQRFLKIGYLLVLFI 122

[Close]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-18
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGD++ WL + F LI L+ I+ YQ++CL DLE DYIN +DS SR+N V++ EFI Q V  
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         ++HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLLT--GHWFMTLLCLPYLYYNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRL 118

[Close]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.1e-14
Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 3   DLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQA----- 62
           DLF W+ + F+ + L+A + YQ+ICL DLE+DY+N F++++R+NR+++ EFI Q      
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  -------VFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQR 122
                  VF  V +P  +       +HA        Y  + +L DVTE++  I  EKK R
Sbjct: 64  FLLTWHWVFFLVAVPVTV-------YHA------MLYKERRYLIDVTEVFRGISFEKKLR 123

Query: 123 FLKMIYFLILFVM 124
           + K+ +++ LF+M
Sbjct: 124 YTKLGFYVFLFIM 123

[Close]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MG+++ W+ +  +LI L+ ++ YQ+I L DLE DYIN +DS SR+N V++ E I Q    
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         K+HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLVT--GHWFMALLCVPYLYYNFHLYSR--------KQHLIDVTEIFNLLDWEKKKRL 118

[Close]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 9.9e-12
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 23  YQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCF---------W 82
           + ++CL DLE DYIN +DS SR+N V++ EFI Q V    +L    G  F         +
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT--GHWFMTLLCLPYLY 74

Query: 83  CHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLI 120
            +FH YS         ++HL DVTEI+N +  EKK+R  K+ Y ++
Sbjct: 75  YNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 110

[Close]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-11
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDL  W+ +   L  LI I+ YQ+ CL DLE D IN +D +SR+NR+++ EF  Q +  
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDCR-YIWKEHLADVTEIYNQIGCEKKQRFLKM 115
             ++    G  F           + R Y+ +EHLADVTE+YN    E+K+R  K+
Sbjct: 61  LYYILT--GHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

[Close]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL
Match: A0A1S3CD35 (protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.4e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL
Match: A0A1S3CBU0 (protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.4e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL
Match: A0A6J1DF23 (protein cornichon homolog 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020444 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35
Identity = 86/126 (68.25%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQRF+KM
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKM 119

[Close]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL
Match: A0A6J1DFZ1 (protein cornichon homolog 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020444 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 7.6e-31
Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 116
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQR +  
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRMISS 114

[Close]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL
Match: A0A540MX74 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_011028 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.5e-20
Identity = 61/121 (50.41%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 4   LFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVH 63
           L+ WL + F ++ L+ ILGYQ++CLVDLE DYIN +DS+SR+N VI+ EFI Q V  F+ 
Sbjct: 4   LWTWLLSFFFILALLCILGYQLVCLVDLEYDYINPYDSSSRINNVILPEFIIQGVLCFIL 63

Query: 64  LPAPIG-SCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFV 123
           L A      F    H Y +++   Y+ + HL DVTEIYNQ+  EKKQRFLK+ Y L+LF+
Sbjct: 64  LIARHWFMLFMALPHLYYNVN--LYMTRRHLVDVTEIYNQLSWEKKQRFLKIGYLLVLFI 122

[Close]

BLAST of CmUC06G108480 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 91.3 bits (225), Expect = 6.6e-19
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGD++ WL + F LI L+ I+ YQ++CL DLE DYIN +DS SR+N V++ EFI Q V  
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         ++HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLLT--GHWFMTLLCLPYLYYNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRL 118

[Close]

BLAST of CmUC06G108480 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 78.2 bits (191), Expect = 5.7e-15
Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 3   DLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQA----- 62
           DLF W+ + F+ + L+A + YQ+ICL DLE+DY+N F++++R+NR+++ EFI Q      
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  -------VFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQR 122
                  VF  V +P  +       +HA        Y  + +L DVTE++  I  EKK R
Sbjct: 64  FLLTWHWVFFLVAVPVTV-------YHA------MLYKERRYLIDVTEVFRGISFEKKLR 123

Query: 123 FLKMIYFLILFVM 124
           + K+ +++ LF+M
Sbjct: 124 YTKLGFYVFLFIM 123

[Close]

BLAST of CmUC06G108480 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MG+++ W+ +  +LI L+ ++ YQ+I L DLE DYIN +DS SR+N V++ E I Q    
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         K+HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLVT--GHWFMALLCVPYLYYNFHLYSR--------KQHLIDVTEIFNLLDWEKKKRL 118

[Close]

BLAST of CmUC06G108480 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 71.2 bits (173), Expect = 7.0e-13
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 23  YQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCF---------W 82
           + ++CL DLE DYIN +DS SR+N V++ EFI Q V    +L    G  F         +
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT--GHWFMTLLCLPYLY 74

Query: 83  CHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLI 120
            +FH YS         ++HL DVTEI+N +  EKK+R  K+ Y ++
Sbjct: 75  YNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 110

[Close]

BLAST of CmUC06G108480 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDL  W+ +   L  LI I+ YQ+ CL DLE D IN +D +SR+NR+++ EF  Q +  
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDCR-YIWKEHLADVTEIYNQIGCEKKQRFLKM 115
             ++    G  F           + R Y+ +EHLADVTE+YN    E+K+R  K+
Sbjct: 61  LYYILT--GHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

The following BLAST results are available for this feature:

BLAST of CmUC06G108480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460129.1	1.1e-36	72.22	PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo]	[more]
XP_008460127.1	1.1e-36	72.22	PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo]	[more]
XP_022152825.1	6.1e-35	68.25	protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831....	[more]
XP_022152838.1	1.6e-30	65.29	protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841....	[more]
XP_008375821.1	7.3e-20	50.41	protein cornichon homolog 4-like [Malus domestica] >TQE03377.1 hypothetical prot...	[more]

BLAST of CmUC06G108480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	9.2e-18	41.41	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q9C7D7	8.1e-14	35.34	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]
Q8GWT5	1.8e-13	37.50	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	9.9e-12	38.68	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	4.9e-11	39.13	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]

BLAST of CmUC06G108480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CD35	5.4e-37	72.22	protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A1S3CBU0	5.4e-37	72.22	protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A6J1DF23	3.0e-35	68.25	protein cornichon homolog 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DFZ1	7.6e-31	65.29	protein cornichon homolog 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A540MX74	3.5e-20	50.41	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_011028 PE=3 SV=1	[more]

BLAST of CmUC06G108480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	6.6e-19	41.41	Cornichon family protein	[more]
AT3G12180.1	5.7e-15	35.34	Cornichon family protein	[more]
AT1G62880.1	1.3e-14	37.50	Cornichon family protein	[more]
AT1G12340.1	7.0e-13	38.68	Cornichon family protein	[more]
AT4G12090.1	3.5e-12	39.13	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..126 e-value: 6.5E-21 score: 85.5
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..123 e-value: 2.2E-22 score: 79.6
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 3..123
None	No IPR available	PANTHER	PTHR12290:SF26	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 3..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G108480.1	CmUC06G108480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane