CmUC03G064670 (gene) Watermelon (USVL531) v1

Overview
NameCmUC03G064670
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr03: 28667802 .. 28668041 (-)
RNA-Seq ExpressionCmUC03G064670
SyntenyCmUC03G064670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGCAAATTCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGGCCATCGGCCCACATGATATTAAATTCATTTTTCTAGGGGGAGGGTCTATCACAAATAGCTTGCTATTGGGGCTCTCGAGGGTCGCCCATTCGTTGCTCTGCTGCATGGGCTTGGCGCACCCCTCCAAATGCGAAGTTCAAATACTTTCATAG

mRNA sequence

ATGGCTTGCAAATTCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGGCCATCGGCCCACATGATATTAAATTCATTTTTCTAGGGGGAGGGTCTATCACAAATAGCTTGCTATTGGGGCTCTCGAGGGTCGCCCATTCGTTGCTCTGCTGCATGGGCTTGGCGCACCCCTCCAAATGCGAAGTTCAAATACTTTCATAG

Coding sequence (CDS)

ATGGCTTGCAAATTCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGGCCATCGGCCCACATGATATTAAATTCATTTTTCTAGGGGGAGGGTCTATCACAAATAGCTTGCTATTGGGGCTCTCGAGGGTCGCCCATTCGTTGCTCTGCTGCATGGGCTTGGCGCACCCCTCCAAATGCGAAGTTCAAATACTTTCATAG

Protein sequence

MACKFIPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCMGLAHPSKCEVQILS
Homology
BLAST of CmUC03G064670 vs. NCBI nr
Match: KAF9688217.1 (hypothetical protein SADUNF_Sadunf02G0174300 [Salix dunnii])

HSP 1 Score: 83.6 bits (205), Expect = 8.5e-13
Identity = 46/69 (66.67%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 6   IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
           IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIF GG  IT             + CC 
Sbjct: 67  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFQGGRPIT-------------VACCR 122

Query: 66  GL-AHPSKC 74
           GL A P +C
Sbjct: 127 GLQASPERC 122

BLAST of CmUC03G064670 vs. NCBI nr
Match: PNT36088.1 (hypothetical protein POPTR_005G107100 [Populus trichocarpa])

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12
Identity = 48/63 (76.19%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVSVLISLISDTWA G HDIKFIFLGGGSIT +   G SR A  L C +
Sbjct: 19 IPFSAFWLRSSVVSVLISLISDTWANGSHDIKFIFLGGGSITVACYWG-SR-ASPLRCTI 78

Query: 66 GLA 69
           LA
Sbjct: 79 ALA 79

BLAST of CmUC03G064670 vs. NCBI nr
Match: PNT36085.1 (hypothetical protein POPTR_005G106800, partial [Populus trichocarpa])

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12
Identity = 48/63 (76.19%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVSVLISLISDTWA G HDIKFIFLGGGSIT +   G SR A  L C +
Sbjct: 8  IPFSAFWLRSSVVSVLISLISDTWANGSHDIKFIFLGGGSITVACYWG-SR-ASPLRCTI 67

Query: 66 GLA 69
           LA
Sbjct: 68 ALA 68

BLAST of CmUC03G064670 vs. NCBI nr
Match: RDX80788.1 (hypothetical protein CR513_38618, partial [Mucuna pruriens])

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVS+LISLISD W  GPHDIK IFL       SLLLG S +A  L  C 
Sbjct: 6  IPFSAFWLRSSVVSILISLISDMWINGPHDIKLIFLRERVHCRSLLLGFSCIALVLHYCK 65

Query: 66 GLAHPSK 73
          GL HP++
Sbjct: 66 GLLHPTQ 72

BLAST of CmUC03G064670 vs. NCBI nr
Match: KAG6732239.1 (hypothetical protein I3842_01G167100 [Carya illinoinensis])

HSP 1 Score: 82.0 bits (201), Expect = 2.5e-12
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0

Query: 4  KFIPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLC 63
          K IPFSAFWLRSSVVSVLISLISDTW+IGPHDIKFIF+ G SIT             + C
Sbjct: 2  KLIPFSAFWLRSSVVSVLISLISDTWSIGPHDIKFIFVRGESIT-------------VAC 59

Query: 64 CMGL-AHPSKC 74
          C G  A P +C
Sbjct: 62 CWGFRASPLRC 59

BLAST of CmUC03G064670 vs. ExPASy TrEMBL
Match: A0A2C9VN34 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G006900 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.6e-19
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVSVLISLISDTWAIGPHDIK IF  G    +SLLLGLSRVAH+L  C 
Sbjct: 29 IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKLIFFMGRVHHSSLLLGLSRVAHALHYCK 88

Query: 66 GLAHP 71
          GLAHP
Sbjct: 89 GLAHP 93

BLAST of CmUC03G064670 vs. ExPASy TrEMBL
Match: A0A371FR58 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_38618 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVS+LISLISD W  GPHDIK IFL       SLLLG S +A  L  C 
Sbjct: 6  IPFSAFWLRSSVVSILISLISDMWINGPHDIKLIFLRERVHCRSLLLGFSCIALVLHYCK 65

Query: 66 GLAHPSK 73
          GL HP++
Sbjct: 66 GLLHPTQ 72

BLAST of CmUC03G064670 vs. ExPASy TrEMBL
Match: A0A2K2AEX8 (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_005G106800 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 48/63 (76.19%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVSVLISLISDTWA G HDIKFIFLGGGSIT +   G SR A  L C +
Sbjct: 8  IPFSAFWLRSSVVSVLISLISDTWANGSHDIKFIFLGGGSITVACYWG-SR-ASPLRCTI 67

Query: 66 GLA 69
           LA
Sbjct: 68 ALA 68

BLAST of CmUC03G064670 vs. ExPASy TrEMBL
Match: B9MX99 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G107100 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 48/63 (76.19%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 6  IPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSITNSLLLGLSRVAHSLLCCM 65
          IPFSAFWLRSSVVSVLISLISDTWA G HDIKFIFLGGGSIT +   G SR A  L C +
Sbjct: 19 IPFSAFWLRSSVVSVLISLISDTWANGSHDIKFIFLGGGSITVACYWG-SR-ASPLRCTI 78

Query: 66 GLA 69
           LA
Sbjct: 79 ALA 79

BLAST of CmUC03G064670 vs. ExPASy TrEMBL
Match: A0A2C9U0P8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G062700 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 4  KFIPFSAFWLRSSVVSVLISLISDTWAIGPHDIKFIFLGGGSIT 48
          K IPFSAFWLRSSVVSVLISLISDTWAIGPHDIK +FL GGSIT
Sbjct: 7  KLIPFSAFWLRSSVVSVLISLISDTWAIGPHDIKLLFLWGGSIT 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF9688217.18.5e-1366.67hypothetical protein SADUNF_Sadunf02G0174300 [Salix dunnii][more]
PNT36088.11.5e-1276.19hypothetical protein POPTR_005G107100 [Populus trichocarpa][more]
PNT36085.11.5e-1276.19hypothetical protein POPTR_005G106800, partial [Populus trichocarpa][more]
RDX80788.11.5e-1265.67hypothetical protein CR513_38618, partial [Mucuna pruriens][more]
KAG6732239.12.5e-1263.38hypothetical protein I3842_01G167100 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2C9VN348.6e-1981.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G006900 PE=4 SV=... [more]
A0A371FR587.0e-1365.67Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_38618 P... [more]
A0A2K2AEX87.0e-1376.19Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_005G1... [more]
B9MX997.0e-1376.19Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G107100 PE=4 ... [more]
A0A2C9U0P87.0e-1390.91Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G062700 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35631OS08G0114150 PROTEINcoord: 4..55
NoneNo IPR availablePANTHERPTHR35631:SF3OS08G0114150 PROTEINcoord: 4..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC03G064670.1CmUC03G064670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane