Homology
BLAST of CmUC02G040630 vs. NCBI nr
Match:
XP_004144814.3 (RNA pseudouridine synthase 1 [Cucumis sativus] >KGN60992.1 hypothetical protein Csa_021313 [Cucumis sativus])
HSP 1 Score: 627.9 bits (1618), Expect = 6.4e-176
Identity = 328/416 (78.85%), Postives = 338/416 (81.25%), Query Frame = 0
Query: 1 MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNCPSTGENYPVP 60
MALF +L P FSIS KT T+FP K FCFHRFKSVSNSM DSSE V NCPST ENYPVP
Sbjct: 1 MALFISLHPNFSISPKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVP 60
Query: 61 LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
LSPPL AISKNLELARAM ASSKSSL+ALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVP
Sbjct: 61 LSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVP 120
Query: 121 RLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSDSLYAG 180
RLLGDSA AG
Sbjct: 121 RLLGDSA--------------------------------------------------NAG 180
Query: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKK 240
IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKK
Sbjct: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKK 240
Query: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKH 300
INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN ME QKFR+
Sbjct: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRG 300
Query: 301 EEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 360
EEETIVV TKSLV+ID KDEILIRARP SGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN
Sbjct: 301 EEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 360
Query: 361 GKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ-EVSSPTSFKPMP 416
K+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EV+SP SFK MP
Sbjct: 361 EKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQHEVNSPQSFKTMP 366
BLAST of CmUC02G040630 vs. NCBI nr
Match:
XP_038889468.1 (RNA pseudouridine synthase 1 [Benincasa hispida])
HSP 1 Score: 612.5 bits (1578), Expect = 2.8e-171
Identity = 322/409 (78.73%), Postives = 334/409 (81.66%), Query Frame = 0
Query: 1 MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNCPSTGENYPVP 60
MAL +LQPTFS HKT T+F PKPFC RFKS+S SMADSSE V NCPST ENYPVP
Sbjct: 1 MALLISLQPTFSTPHKTFTEF--PKPFCSGRFKSISKSMADSSEPVTGNCPSTRENYPVP 60
Query: 61 LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
LSPPL AISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP
Sbjct: 61 LSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
Query: 121 RLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSDSLYAG 180
RLL DSAM AG
Sbjct: 121 RLLSDSAM--------------------------------------------------AG 180
Query: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKK 240
IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGS PKWKK
Sbjct: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKK 240
Query: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKH 300
IN+KSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLS+NG+N ME FQKF K
Sbjct: 241 INIKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSINGQNAMEEFQKFGK- 300
Query: 301 EEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 360
+EET+VVQTKSLV+IDGQKDEILIRARP SGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN
Sbjct: 301 DEETVVVQTKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 356
Query: 361 GKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQP-QQEVSSP 409
GK+YD HELHAESLYFVHP+TGIPLKLQAPLPSWASQA QP QQEV+SP
Sbjct: 361 GKIYDCHELHAESLYFVHPITGIPLKLQAPLPSWASQAWQPQQQEVNSP 356
BLAST of CmUC02G040630 vs. NCBI nr
Match:
XP_008453651.1 (PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo] >KAA0048062.1 RNA pseudouridine synthase 1 [Cucumis melo var. makuwa] >TYJ96474.1 RNA pseudouridine synthase 1 [Cucumis melo var. makuwa])
HSP 1 Score: 576.2 bits (1484), Expect = 2.2e-160
Identity = 300/378 (79.37%), Postives = 310/378 (82.01%), Query Frame = 0
Query: 39 MADSSEKVARNCPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
M DSSE V NCPSTGENYPVPLSPPL AISKNLELARAMAASSKSSLFALSANDVIYED
Sbjct: 1 MTDSSEPVTGNCPSTGENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYED 60
Query: 99 EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWA 158
EWLIAVNKPQGIYCE+VLAAVPRLL DSA
Sbjct: 61 EWLIAVNKPQGIYCENVLAAVPRLLCDSA------------------------------- 120
Query: 159 CSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 218
AGIKT+LPELHLANRLDRDTSGVMVITKSHKVASKLVKAF
Sbjct: 121 -------------------NAGIKTNLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 180
Query: 219 TDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 278
TDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGS+VRDMET
Sbjct: 181 TDHTVSKSYIAFCVGTSPKWKKIHVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMET 240
Query: 279 YFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRL 338
YFEVLSVNGKN ME QKFRK EEETIVV TKSLV+ID QKDE+LIRARP SGRTHQIRL
Sbjct: 241 YFEVLSVNGKNTMEELQKFRKEEEETIVVHTKSLVDIDSQKDEVLIRARPRSGRTHQIRL 300
Query: 339 HCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQA 398
HCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQAPLPSWASQA
Sbjct: 301 HCQYLGIPIRGDVKYEGVTEWNGKTYDSHELHAESLYFVHPITGIPLKLQAPLPSWASQA 328
Query: 399 LQP-QQEVSSPTSFKPMP 416
LQP QQEV+SP SFK MP
Sbjct: 361 LQPQQQEVNSPQSFKTMP 328
BLAST of CmUC02G040630 vs. NCBI nr
Match:
KAG7021056.1 (RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 565.8 bits (1457), Expect = 3.0e-157
Identity = 306/420 (72.86%), Postives = 324/420 (77.14%), Query Frame = 0
Query: 1 MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNCPSTGENYPVP 60
MAL +QP FSI HK+ KF PKPF FHRF+ V+NSMADSS+ P TGENYPVP
Sbjct: 6 MALVVTIQPPFSIPHKSFAKF--PKPFRFHRFRPVTNSMADSSK------PVTGENYPVP 65
Query: 61 LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
LSPPL AISKNLELARAMAA SKSSLF+LSA DVIYEDEWLIAVNKPQG+YCESVLA+VP
Sbjct: 66 LSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVP 125
Query: 121 RLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSDSLYAG 180
R LGDSAMAG +
Sbjct: 126 RFLGDSAMAG---------------------------------------------AQSGE 185
Query: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKK 240
IK SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGS PKWKK
Sbjct: 186 IKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKK 245
Query: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRK- 300
I VKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET FEVLSVNG+N E + RK
Sbjct: 246 IIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKD 305
Query: 301 ---HEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGV 360
EEETIV Q+KSL++ID +KDEILIRARP SGRTHQIRLH QYLGIPI GDVKYEGV
Sbjct: 306 EEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKYEGV 365
Query: 361 TEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQP-QQEVSSPTSFKPMP 416
TEWNGK+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWA+QALQP QQEV+S S KPMP
Sbjct: 366 TEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVNSAASLKPMP 372
BLAST of CmUC02G040630 vs. NCBI nr
Match:
KAG6586224.1 (RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 558.9 bits (1439), Expect = 3.6e-155
Identity = 306/422 (72.51%), Postives = 324/422 (76.78%), Query Frame = 0
Query: 1 MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNCPSTGENYPVP 60
MAL LQ FSI +K+ KF PKPF FHRF+ V+NSMADSS+ P TGENYPVP
Sbjct: 1 MALVVTLQAPFSIPNKSFAKF--PKPFRFHRFRPVTNSMADSSK------PVTGENYPVP 60
Query: 61 LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
LSPPL AISKNLELARAMAA SKSSLF+LSA DV+YEDEWLIAVNKPQG+YCESVLA+VP
Sbjct: 61 LSPPLPAISKNLELARAMAACSKSSLFSLSACDVVYEDEWLIAVNKPQGVYCESVLASVP 120
Query: 121 RLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSDSLYAG 180
LGDSAMAG E SG
Sbjct: 121 CFLGDSAMAG------------------EQSG---------------------------E 180
Query: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKK 240
IK SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGS PKWKK
Sbjct: 181 IKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKK 240
Query: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRK- 300
I VKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET FEVLSVNG+N E + RK
Sbjct: 241 IIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKD 300
Query: 301 -----HEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYE 360
EEETIV Q+KSL++ID +KDEILIRARP SGRTHQIRLH QYLGIPI GDVKYE
Sbjct: 301 EEEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKYE 360
Query: 361 GVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQP-QQEVSSPTSFKP 416
GVTEWNGK+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWA+QALQP QQEV+S S KP
Sbjct: 361 GVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVNSAASLKP 369
BLAST of CmUC02G040630 vs. ExPASy Swiss-Prot
Match:
Q2QNM3 (RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0560500 PE=2 SV=1)
HSP 1 Score: 341.7 bits (875), Expect = 1.2e-92
Identity = 183/350 (52.29%), Postives = 224/350 (64.00%), Query Frame = 0
Query: 52 STGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIY 111
+TGE YPVP+SPP A SK++EL RAM AS++S+ A S+ V++EDEWL V+KP G+Y
Sbjct: 47 ATGE-YPVPVSPPYPAASKDVELRRAMTASARSA--AYSSAPVVFEDEWLAVVDKPAGVY 106
Query: 112 CESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHV 171
C+++L+A+P CS +
Sbjct: 107 CDALLSALP--------------------------------------CSAATL------- 166
Query: 172 LFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFC 231
G + + P LHLANRLDRDTSG+MVITK +KVA KLVKAFT+H V K+Y+A C
Sbjct: 167 --------GDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYLALC 226
Query: 232 VGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVM 291
+G P W+KI + SGHGRSK G WRVYA +DVGRSLPGGSVVRDM T FEVL +NGK
Sbjct: 227 IGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGINGKGQF 286
Query: 292 EGFQKFRKHEEETIVVQTKSLVEIDGQKDE----ILIRARPCSGRTHQIRLHCQYLGIPI 351
F E E+I VQ K+ ++ DE IL+RA P SGRTHQIRLHCQYLG PI
Sbjct: 287 REPSNFEVDETESITVQEKA-ADLTSDGDEKNSIILVRAYPQSGRTHQIRLHCQYLGFPI 339
Query: 352 RGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQ 398
RGDVKY GV EWNG YD H LHAESL FVHPVTG+P+ ++PLPSWA++
Sbjct: 347 RGDVKYSGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWANE 339
BLAST of CmUC02G040630 vs. ExPASy Swiss-Prot
Match:
Q7XA65 (RNA pseudouridine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g56345 PE=2 SV=1)
HSP 1 Score: 333.2 bits (853), Expect = 4.3e-90
Identity = 175/343 (51.02%), Postives = 219/343 (63.85%), Query Frame = 0
Query: 56 NYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESV 115
NYP P+S P ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+V
Sbjct: 39 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 116 LAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSD 175
L + P+++ DS+
Sbjct: 99 LRSAPQIVLDSS------------------------------------------------ 158
Query: 176 SLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGST 235
E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+H + KSYIA C+GS+
Sbjct: 159 ----------SEYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSS 218
Query: 236 PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQ 295
P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+SVN ++
Sbjct: 219 PNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNS---VKNES 278
Query: 296 KFRKHEEETIVVQTKSLVEIDGQKDE--ILIRARPCSGRTHQIRLHCQYLGIPIRGDVKY 355
+ IV + + + G D+ +++RA P SGRTHQIRLHCQYLGIPIRGDVKY
Sbjct: 279 CELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKY 320
Query: 356 EGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS 397
GV EWNG+ ++ HELHAE L HPVTG + ++APLP WA+
Sbjct: 339 HGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWAA 320
BLAST of CmUC02G040630 vs. ExPASy Swiss-Prot
Match:
Q8PHN2 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rluD PE=3 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 69/238 (28.99%), Postives = 104/238 (43.70%), Query Frame = 0
Query: 167 IVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKS 226
+V +LF D A S+P + +RLD+DTSGVMV+ ++ + + LV+ + V +
Sbjct: 121 LVNALLFRDPALA----SVPRAGVVHRLDKDTSGVMVVARTVQAQTALVEQLSAREVHRQ 180
Query: 227 YIAFCVGSTPKWKKINVK-SGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSV 286
Y+A VG+ N H R + + A D G RD T++ +
Sbjct: 181 YLAVVVGALVSGGTANAPIDRHPRDRLKM----AVRDDG---------RDAVTHYRLR-- 240
Query: 287 NGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGI 346
++FR H + R +GRTHQIR+H +L
Sbjct: 241 ---------ERFRAH---------------------TALECRLETGRTHQIRVHMAHLKS 300
Query: 347 PIRGDVKYEGVTEWNGKVYDS--HE--------LHAESLYFVHPVTGIPLKLQAPLPS 394
PI GD Y G + D HE LHAE+L F+HPV+G P++ AP+P+
Sbjct: 301 PIVGDPLYGGALKLPKGATDELVHELRTFKRQALHAETLEFLHPVSGEPVRASAPVPA 309
BLAST of CmUC02G040630 vs. ExPASy Swiss-Prot
Match:
Q8FIP7 (Ribosomal large subunit pseudouridine synthase C OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rluC PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 1.9e-13
Identity = 62/230 (26.96%), Postives = 101/230 (43.91%), Query Frame = 0
Query: 180 GIKTSLPE---LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTP 239
G++ PE L L +RLDRDTSGV+++ K L + + + K Y+A G
Sbjct: 126 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQ-- 185
Query: 240 KWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQK 299
W+ Y + L KN+++ ++
Sbjct: 186 ------------------WQSYVKSVQAPLL--------------------KNILQSGER 245
Query: 300 FRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGV 359
+ +E +T+ VE + L+R P +GRTHQIR+H QY G PI D +Y G
Sbjct: 246 IVRVSQEGKPSETRFKVE-ERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRY-GD 305
Query: 360 TEWNGKVYDSHE------LHAESLYFVHPVTGIPLKLQAPLPSWASQALQ 401
E++ ++ ++ LHA +L F HP TG ++++AP+ + LQ
Sbjct: 306 REFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQ 313
BLAST of CmUC02G040630 vs. ExPASy Swiss-Prot
Match:
Q68XB2 (Ribosomal large subunit pseudouridine synthase C OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=rluC PE=3 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 2.5e-13
Identity = 64/215 (29.77%), Postives = 99/215 (46.05%), Query Frame = 0
Query: 187 ELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSG 246
+ L +RLD++TSG+++I K++ + KL AF + V K Y A G K I VKS
Sbjct: 132 DFKLVHRLDKETSGLLLIAKNYLSSVKLHDAFKEKLVIKKYFAITYGRPVKNVGI-VKSN 191
Query: 247 HGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIV 306
G+SK R++ D+ G + TY+++L N+
Sbjct: 192 IGKSK---GRMFKITDIDSD--NGKLA---ITYYKLLKSLNNNL---------------- 251
Query: 307 VQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKY--EGVTEWNGKVY 366
LI P +GR HQ+RLH Q LG PI GD KY + V ++ ++
Sbjct: 252 ---------------FLIEFMPVTGRMHQLRLHAQLLGCPILGDDKYGNKEVMPYSKYMF 302
Query: 367 DSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL 400
LHA ++Y + G +KL+A LP + ++ L
Sbjct: 312 ----LHANNIYLSESIVGKEIKLEAKLPFYFTRRL 302
BLAST of CmUC02G040630 vs. ExPASy TrEMBL
Match:
A0A0A0LJY6 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033960 PE=4 SV=1)
HSP 1 Score: 627.9 bits (1618), Expect = 3.1e-176
Identity = 328/416 (78.85%), Postives = 338/416 (81.25%), Query Frame = 0
Query: 1 MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNCPSTGENYPVP 60
MALF +L P FSIS KT T+FP K FCFHRFKSVSNSM DSSE V NCPST ENYPVP
Sbjct: 1 MALFISLHPNFSISPKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVP 60
Query: 61 LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
LSPPL AISKNLELARAM ASSKSSL+ALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVP
Sbjct: 61 LSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVP 120
Query: 121 RLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSDSLYAG 180
RLLGDSA AG
Sbjct: 121 RLLGDSA--------------------------------------------------NAG 180
Query: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKK 240
IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKK
Sbjct: 181 IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKK 240
Query: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKH 300
INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN ME QKFR+
Sbjct: 241 INVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRG 300
Query: 301 EEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 360
EEETIVV TKSLV+ID KDEILIRARP SGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN
Sbjct: 301 EEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN 360
Query: 361 GKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ-EVSSPTSFKPMP 416
K+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EV+SP SFK MP
Sbjct: 361 EKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQHEVNSPQSFKTMP 366
BLAST of CmUC02G040630 vs. ExPASy TrEMBL
Match:
A0A5A7TX25 (RNA pseudouridine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001190 PE=4 SV=1)
HSP 1 Score: 576.2 bits (1484), Expect = 1.1e-160
Identity = 300/378 (79.37%), Postives = 310/378 (82.01%), Query Frame = 0
Query: 39 MADSSEKVARNCPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
M DSSE V NCPSTGENYPVPLSPPL AISKNLELARAMAASSKSSLFALSANDVIYED
Sbjct: 1 MTDSSEPVTGNCPSTGENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYED 60
Query: 99 EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWA 158
EWLIAVNKPQGIYCE+VLAAVPRLL DSA
Sbjct: 61 EWLIAVNKPQGIYCENVLAAVPRLLCDSA------------------------------- 120
Query: 159 CSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 218
AGIKT+LPELHLANRLDRDTSGVMVITKSHKVASKLVKAF
Sbjct: 121 -------------------NAGIKTNLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 180
Query: 219 TDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 278
TDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGS+VRDMET
Sbjct: 181 TDHTVSKSYIAFCVGTSPKWKKIHVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMET 240
Query: 279 YFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRL 338
YFEVLSVNGKN ME QKFRK EEETIVV TKSLV+ID QKDE+LIRARP SGRTHQIRL
Sbjct: 241 YFEVLSVNGKNTMEELQKFRKEEEETIVVHTKSLVDIDSQKDEVLIRARPRSGRTHQIRL 300
Query: 339 HCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQA 398
HCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQAPLPSWASQA
Sbjct: 301 HCQYLGIPIRGDVKYEGVTEWNGKTYDSHELHAESLYFVHPITGIPLKLQAPLPSWASQA 328
Query: 399 LQP-QQEVSSPTSFKPMP 416
LQP QQEV+SP SFK MP
Sbjct: 361 LQPQQQEVNSPQSFKTMP 328
BLAST of CmUC02G040630 vs. ExPASy TrEMBL
Match:
A0A1S3BW87 (RNA pseudouridine synthase 1 OS=Cucumis melo OX=3656 GN=LOC103494301 PE=4 SV=1)
HSP 1 Score: 576.2 bits (1484), Expect = 1.1e-160
Identity = 300/378 (79.37%), Postives = 310/378 (82.01%), Query Frame = 0
Query: 39 MADSSEKVARNCPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
M DSSE V NCPSTGENYPVPLSPPL AISKNLELARAMAASSKSSLFALSANDVIYED
Sbjct: 1 MTDSSEPVTGNCPSTGENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYED 60
Query: 99 EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWA 158
EWLIAVNKPQGIYCE+VLAAVPRLL DSA
Sbjct: 61 EWLIAVNKPQGIYCENVLAAVPRLLCDSA------------------------------- 120
Query: 159 CSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 218
AGIKT+LPELHLANRLDRDTSGVMVITKSHKVASKLVKAF
Sbjct: 121 -------------------NAGIKTNLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 180
Query: 219 TDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 278
TDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGS+VRDMET
Sbjct: 181 TDHTVSKSYIAFCVGTSPKWKKIHVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMET 240
Query: 279 YFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRL 338
YFEVLSVNGKN ME QKFRK EEETIVV TKSLV+ID QKDE+LIRARP SGRTHQIRL
Sbjct: 241 YFEVLSVNGKNTMEELQKFRKEEEETIVVHTKSLVDIDSQKDEVLIRARPRSGRTHQIRL 300
Query: 339 HCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQA 398
HCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQAPLPSWASQA
Sbjct: 301 HCQYLGIPIRGDVKYEGVTEWNGKTYDSHELHAESLYFVHPITGIPLKLQAPLPSWASQA 328
Query: 399 LQP-QQEVSSPTSFKPMP 416
LQP QQEV+SP SFK MP
Sbjct: 361 LQPQQQEVNSPQSFKTMP 328
BLAST of CmUC02G040630 vs. ExPASy TrEMBL
Match:
A0A6J1DT56 (RNA pseudouridine synthase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023261 PE=4 SV=1)
HSP 1 Score: 545.4 bits (1404), Expect = 2.0e-151
Identity = 287/375 (76.53%), Postives = 307/375 (81.87%), Query Frame = 0
Query: 39 MADSSEKVARNCPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
MAD S V N P+TG+NYP+PLSPPL AISKNLELARAMAASSKSSLFALSA DVI+ED
Sbjct: 1 MADPSIPVTGNSPATGQNYPIPLSPPLPAISKNLELARAMAASSKSSLFALSATDVIFED 60
Query: 99 EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWA 158
EWLIAVNKPQG+YCESVLA+VPRLLGDSAMAG E SG
Sbjct: 61 EWLIAVNKPQGVYCESVLASVPRLLGDSAMAG------------------EQSG-----G 120
Query: 159 CSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 218
+ L + L A I+ SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF
Sbjct: 121 TTTLCLCL------------ARIQISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 180
Query: 219 TDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 278
TDH VSKSYIAFCVGS PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET
Sbjct: 181 TDHNVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 240
Query: 279 YFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRL 338
YFEVLSVNG++ M+ + RK EEETIVVQ+KSL++ID KDEILIRARP SGRTHQIRL
Sbjct: 241 YFEVLSVNGQSTMDELPEVRKDEEETIVVQSKSLIDIDAHKDEILIRARPRSGRTHQIRL 300
Query: 339 HCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQA 398
HCQYLGIPIRGDVKYEGV EWNG +YDSHELHAESL+FVHPVTGIPLKLQAPLPSWASQA
Sbjct: 301 HCQYLGIPIRGDVKYEGVIEWNGNIYDSHELHAESLFFVHPVTGIPLKLQAPLPSWASQA 340
Query: 399 -LQPQQEVSSPTSFK 413
L QQEVSSP++ K
Sbjct: 361 LLSQQQEVSSPSTLK 340
BLAST of CmUC02G040630 vs. ExPASy TrEMBL
Match:
A0A6J1DQ12 (RNA pseudouridine synthase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023261 PE=4 SV=1)
HSP 1 Score: 544.3 bits (1401), Expect = 4.5e-151
Identity = 285/375 (76.00%), Postives = 303/375 (80.80%), Query Frame = 0
Query: 39 MADSSEKVARNCPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
MAD S V N P+TG+NYP+PLSPPL AISKNLELARAMAASSKSSLFALSA DVI+ED
Sbjct: 1 MADPSIPVTGNSPATGQNYPIPLSPPLPAISKNLELARAMAASSKSSLFALSATDVIFED 60
Query: 99 EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWA 158
EWLIAVNKPQG+YCESVLA+VPRLLGDSAMAG E SG
Sbjct: 61 EWLIAVNKPQGVYCESVLASVPRLLGDSAMAG------------------EQSG------ 120
Query: 159 CSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 218
GI+ SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF
Sbjct: 121 ---------------------GIQISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAF 180
Query: 219 TDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 278
TDH VSKSYIAFCVGS PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET
Sbjct: 181 TDHNVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET 240
Query: 279 YFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRL 338
YFEVLSVNG++ M+ + RK EEETIVVQ+KSL++ID KDEILIRARP SGRTHQIRL
Sbjct: 241 YFEVLSVNGQSTMDELPEVRKDEEETIVVQSKSLIDIDAHKDEILIRARPRSGRTHQIRL 300
Query: 339 HCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQA 398
HCQYLGIPIRGDVKYEGV EWNG +YDSHELHAESL+FVHPVTGIPLKLQAPLPSWASQA
Sbjct: 301 HCQYLGIPIRGDVKYEGVIEWNGNIYDSHELHAESLFFVHPVTGIPLKLQAPLPSWASQA 330
Query: 399 -LQPQQEVSSPTSFK 413
L QQEVSSP++ K
Sbjct: 361 LLSQQQEVSSPSTLK 330
BLAST of CmUC02G040630 vs. TAIR 10
Match:
AT1G56345.1 (Pseudouridine synthase family protein )
HSP 1 Score: 333.2 bits (853), Expect = 3.0e-91
Identity = 175/343 (51.02%), Postives = 219/343 (63.85%), Query Frame = 0
Query: 56 NYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESV 115
NYP P+S P ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+V
Sbjct: 39 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 116 LAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISGYHDRWACSELAMLLIVRHVLFSD 175
L + P+++ DS+
Sbjct: 99 LRSAPQIVLDSS------------------------------------------------ 158
Query: 176 SLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGST 235
E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+H + KSYIA C+GS+
Sbjct: 159 ----------SEYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSS 218
Query: 236 PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQ 295
P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+SVN ++
Sbjct: 219 PNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNS---VKNES 278
Query: 296 KFRKHEEETIVVQTKSLVEIDGQKDE--ILIRARPCSGRTHQIRLHCQYLGIPIRGDVKY 355
+ IV + + + G D+ +++RA P SGRTHQIRLHCQYLGIPIRGDVKY
Sbjct: 279 CELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKY 320
Query: 356 EGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS 397
GV EWNG+ ++ HELHAE L HPVTG + ++APLP WA+
Sbjct: 339 HGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWAA 320
BLAST of CmUC02G040630 vs. TAIR 10
Match:
AT1G76050.2 (Pseudouridine synthase family protein )
HSP 1 Score: 75.5 bits (184), Expect = 1.1e-13
Identity = 80/321 (24.92%), Postives = 125/321 (38.94%), Query Frame = 0
Query: 93 DVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGLWILLYNRVFSMDYKISSEISG 152
D++YED+ ++ VNKP V+ P + + G IL + + +DY S E
Sbjct: 149 DIVYEDKHVLVVNKP----AHMVVHPAPGNPTGTLVNG--ILHHCSLPCVDYSNSEEDDD 208
Query: 153 YHDRWACSELAMLLIVRHVLFSDSLYAGIKTSLPELHLANRLDRDTSGVMVITKSHKVAS 212
+ + M S S YA + + +RLD+ T+G++V+ K +
Sbjct: 209 SDEETFSDDEEMTT-------SPSSYA----ASVRPGIVHRLDKGTTGLLVVAKDEHSHA 268
Query: 213 KLVKAFTDHTVSKSYIAFCVG-STPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGS 272
L + F HT+ + Y++ G +P +I + G S R+ AA +PGG
Sbjct: 269 HLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSN----RIRMAA-----IPGG- 328
Query: 273 VVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSG 332
V G +++ ++E L+ R +G
Sbjct: 329 -------------VRGGRARHAASRYK-------------VIETFAGGGSALVEWRLETG 388
Query: 333 RTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVY-------DSHE------------LHAE 392
RTHQIR H +Y+G+P+ GD Y G + D E LHA
Sbjct: 389 RTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMDRPCLHAI 416
Query: 393 SLYFVHPVTGIPLKLQAPLPS 394
L F HP TG +K P PS
Sbjct: 449 VLGFTHPCTGEIVKFSCPPPS 416
BLAST of CmUC02G040630 vs. TAIR 10
Match:
AT3G19440.1 (Pseudouridine synthase family protein )
HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 58/197 (29.44%), Postives = 82/197 (41.62%), Query Frame = 0
Query: 179 AGIKTSLPEL-------------HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSK 238
+GIKTS+ EL L +RLDRD SG++V+ ++ A+ L F + T
Sbjct: 207 SGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKT--- 266
Query: 239 SYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVG--------RSLPGGSVVRDME 298
G++ K NVKS + R Y A +G S P VV D +
Sbjct: 267 ------TGASAYGVKKNVKS--------LKRKYMALVIGCPPRQRGQISAPLRKVVVD-D 326
Query: 299 TYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIR 354
E ++VN + Q T+ V + RP +GR HQ+R
Sbjct: 327 GKSERITVNDNGELVSTQH----------AITEYRVIESSPHGYTWLELRPLTGRKHQLR 375
BLAST of CmUC02G040630 vs. TAIR 10
Match:
AT5G51140.1 (Pseudouridine synthase family protein )
HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 50/188 (26.60%), Postives = 70/188 (37.23%), Query Frame = 0
Query: 192 NRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSK 251
+RLDR SG+++I ++ A + V K YIA +G P+ + I
Sbjct: 184 HRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMI---------- 243
Query: 252 FGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKS 311
V A + S G S D + + V GK F +
Sbjct: 244 -----VDANINYNGS-EGRSTAEDANSSGDDKKVKGKPACTKFTR--------------- 303
Query: 312 LVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHA 371
ID L+ P +GRTHQIR+H QY G PI D Y N + Y + + A
Sbjct: 304 ---IDTNGTHSLVSCEPVTGRTHQIRVHLQYTGHPIANDPLYLNQHIDNLETYIAKRIDA 337
Query: 372 ESLYFVHP 380
V P
Sbjct: 364 GERKIVSP 337
BLAST of CmUC02G040630 vs. TAIR 10
Match:
AT5G51140.2 (Pseudouridine synthase family protein )
HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 50/188 (26.60%), Postives = 70/188 (37.23%), Query Frame = 0
Query: 192 NRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSK 251
+RLDR SG+++I ++ A + V K YIA +G P+ + I
Sbjct: 184 HRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMI---------- 243
Query: 252 FGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKS 311
V A + S G S D + + V GK F +
Sbjct: 244 -----VDANINYNGS-EGRSTAEDANSSGDDKKVKGKPACTKFTR--------------- 303
Query: 312 LVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHA 371
ID L+ P +GRTHQIR+H QY G PI D Y N + Y + + A
Sbjct: 304 ---IDTNGTHSLVSCEPVTGRTHQIRVHLQYTGHPIANDPLYLNQHIDNLETYIAKRIDA 337
Query: 372 ESLYFVHP 380
V P
Sbjct: 364 GERKIVSP 337
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004144814.3 | 6.4e-176 | 78.85 | RNA pseudouridine synthase 1 [Cucumis sativus] >KGN60992.1 hypothetical protein ... | [more] |
XP_038889468.1 | 2.8e-171 | 78.73 | RNA pseudouridine synthase 1 [Benincasa hispida] | [more] |
XP_008453651.1 | 2.2e-160 | 79.37 | PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo] >KAA0048062.1 RNA pseudou... | [more] |
KAG7021056.1 | 3.0e-157 | 72.86 | RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. argyrosperm... | [more] |
KAG6586224.1 | 3.6e-155 | 72.51 | RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q2QNM3 | 1.2e-92 | 52.29 | RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g05... | [more] |
Q7XA65 | 4.3e-90 | 51.02 | RNA pseudouridine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g56345 PE=2 S... | [more] |
Q8PHN2 | 2.9e-14 | 28.99 | Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. c... | [more] |
Q8FIP7 | 1.9e-13 | 26.96 | Ribosomal large subunit pseudouridine synthase C OS=Escherichia coli O6:H1 (stra... | [more] |
Q68XB2 | 2.5e-13 | 29.77 | Ribosomal large subunit pseudouridine synthase C OS=Rickettsia typhi (strain ATC... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LJY6 | 3.1e-176 | 78.85 | PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G03... | [more] |
A0A5A7TX25 | 1.1e-160 | 79.37 | RNA pseudouridine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1S3BW87 | 1.1e-160 | 79.37 | RNA pseudouridine synthase 1 OS=Cucumis melo OX=3656 GN=LOC103494301 PE=4 SV=1 | [more] |
A0A6J1DT56 | 2.0e-151 | 76.53 | RNA pseudouridine synthase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A6J1DQ12 | 4.5e-151 | 76.00 | RNA pseudouridine synthase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |