Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGGTTGGCATGTGGCTTCTTCCTGCTAGCCTTCATTATATCATTCAAGTGAATTTGACAGAATGTGTATCCCAATTGTCCAAGTGTACAGAGGATGCACTTCTGTAGAATCCATGCCCATGTGTTTTGATCTCTTTTACCGTCTCTGATTCTTGACCTGGTGTGGTTCATCACCAAGACAACATCAGCTCCAATTTACCTGAAAAATCATGTTATTCTACAACTTAAAATGACATGATAACTCTGCCTGTGTCATGCATTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGCTCTCTCATTGGTGCAGACTGAGACAGAGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTGTCGAAGAAAAAAAAAAGGTTTACATATGTTTGAGTTGTGCAATTAATAGTGGAATGGGCATGTTATGTTGTAATATTGTTAGAAAAAATATCTATAAACTATGCTGTTATTCATACAACCTGGGTGACGCACAAACATAAGAACTACAACAAAGACAATAATAAATCAAGGTTTACAAGAACACCCGTCCATAACAAGAAAGAAACTCTCAGAGGTTGCAAAGAGAAGAAGTGTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCAAATAAAAGGAGAATTTCATTATTTCCTCACCAGTTCTACCTCAGCCATTTCATGCAAATAACAGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGGTCTGAGATACAAGTTCCCTGCAGACCATGAATTTTAGTGCTACCGGTATTGCTTGCTTACTTTCCCTAAATTATTTGAAAAGATCCAAATGGATAGTCGTCAACTTACCCAATCAAGCTATATATAATAAAAATATAAAGAAAGAAACAGGTAATTCGAAAGACAAGAAAAATGGATATGATAATTTCACCTCCAAACTGAAACACCAATAATATATATAATATGATGGAAAACAGCAAAACAGCAAAGCAATCAGAGAACTTTGAAGACCATAATGATATAAGTTCCACATCAGTTTCAGATAACAAAGTTTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG
mRNA sequence
ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG
Coding sequence (CDS)
ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG
Protein sequence
MAANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAAIEATKKRKGKTLISHNARMTASEKTDWPSFSYNKLTNSIQNATPIIEQTLLSRFKSYLHRFTYPQRIPKPHFPFNSNSGDIATKCNVKKHQANSNQRTLKALHNMS
Homology
BLAST of CmUC01G007350 vs. NCBI nr
Match:
KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 159.5 bits (402), Expect = 3.6e-35
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
MA PHE SLDMNELYSFITA+T RNPGISSCTWG ASDCLPIYIKMQRP SPVNS
Sbjct: 1 MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRP--SPVNS- 60
Query: 61 PQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIAL 120
PQ G F+S FQAIL LF +L S PP + L G VML F SF GVLLQ FPKIA
Sbjct: 61 PQFGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAH 120
Query: 121 LLEKLGALFAAI 131
LL+ GAL AAI
Sbjct: 121 LLQMFGALLAAI 128
BLAST of CmUC01G007350 vs. NCBI nr
Match:
KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])
HSP 1 Score: 158.3 bits (399), Expect = 8.1e-35
Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0
Query: 1 MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
MA PHE SLDMN+L S I A+T RNPGISSCTWG ASDCLPIYIKMQRP SPVNS
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRP--SPVNS- 60
Query: 61 PQLGKIFLSLTFQAILALFFSLS-SSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 120
PQ G FLSLTFQAI+ LF SL+ SSS P P+ LF AVML F S+ GV+LQ FPK A
Sbjct: 61 PQFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120
Query: 121 LLLEKLGALFAAI 131
LL+ GALFAAI
Sbjct: 121 QLLQTFGALFAAI 130
BLAST of CmUC01G007350 vs. NCBI nr
Match:
XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])
HSP 1 Score: 143.7 bits (361), Expect = 2.1e-30
Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
Query: 3 ANTPHETSLDMNELYSFITAITKRNPGISSCTWGA-----SDCLPIYIKMQRPSSSPVNS 62
A+TP +TS+DMN L SFITAI +RN GISS TWG SDCLPI I+MQRP P S
Sbjct: 2 ASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRP--PPAKS 61
Query: 63 PPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 122
LGK L LTFQA+LALF SL SS P PT+LFGA +LI FAVSFAG+ LQ A+P++A
Sbjct: 62 SQSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMA 121
BLAST of CmUC01G007350 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 122.9 bits (307), Expect = 3.8e-24
Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0
Query: 13 MNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPP---QLGKIFLSLT 72
MNELYSFITAI +RNP I+S LPI I MQRP SP NS +GK L LT
Sbjct: 1 MNELYSFITAINERNPEINS--------LPICITMQRP--SPANSSKTENNVGKTILGLT 60
Query: 73 FQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAA 131
FQA+LALF + +SSPP T LF A +LI FAVSFAG+ LQN FP+IALL EK+GAL AA
Sbjct: 61 FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 111
BLAST of CmUC01G007350 vs. NCBI nr
Match:
KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])
HSP 1 Score: 116.7 bits (291), Expect = 2.7e-22
Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0
Query: 3 ANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLG 62
A+T H+TSLDM+ SFI I++RN G+ C S+CLP++I+MQ+ + +S +LG
Sbjct: 2 ASTSHQTSLDMSAFSSFIRTISQRNYGLGCCC-TPSNCLPVFIRMQQSPQATADSSQKLG 61
Query: 63 KIFLSLTFQAILALFFSLSSSSPPFPTVL--FGAVMLIGFAVSFAGVLLQNAFPKIALLL 122
KI LSL+FQA+LALF S +SPP P ++ F A + I FAVSFA + L N+FP+ A L
Sbjct: 62 KIILSLSFQAVLALFISSPPTSPP-PLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 121
Query: 123 EKLGALFAA 130
EK+GALF+A
Sbjct: 122 EKVGALFSA 128
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match:
A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
MA PHE SLDMNELYSFITA+T RNPGISSCTWG ASDCLPIYIKMQRP SPVNS
Sbjct: 1 MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRP--SPVNS- 60
Query: 61 PQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIAL 120
PQ G F+S FQAIL LF +L S PP + L G VML F SF GVLLQ FPKIA
Sbjct: 61 PQFGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAH 120
Query: 121 LLEKLGALFAAI 131
LL+ GAL AAI
Sbjct: 121 LLQMFGALLAAI 128
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35
Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0
Query: 1 MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
MA PHE SLDMN+L S I A+T RNPGISSCTWG ASDCLPIYIKMQRP SPVNS
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRP--SPVNS- 60
Query: 61 PQLGKIFLSLTFQAILALFFSLS-SSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 120
PQ G FLSLTFQAI+ LF SL+ SSS P P+ LF AVML F S+ GV+LQ FPK A
Sbjct: 61 PQFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120
Query: 121 LLLEKLGALFAAI 131
LL+ GALFAAI
Sbjct: 121 QLLQTFGALFAAI 130
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match:
A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
Query: 3 ANTPHETSLDMNELYSFITAITKRNPGISSCTWGA-----SDCLPIYIKMQRPSSSPVNS 62
A+TP +TS+DMN L SFITAI +RN GISS TWG SDCLPI I+MQRP P S
Sbjct: 2 ASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRP--PPAKS 61
Query: 63 PPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 122
LGK L LTFQA+LALF SL SS P PT+LFGA +LI FAVSFAG+ LQ A+P++A
Sbjct: 62 SQSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMA 121
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24
Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0
Query: 13 MNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPP---QLGKIFLSLT 72
MNELYSFITAI +RNP I+S LPI I MQRP SP NS +GK L LT
Sbjct: 1 MNELYSFITAINERNPEINS--------LPICITMQRP--SPANSSKTENNVGKTILGLT 60
Query: 73 FQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAA 131
FQA+LALF + +SSPP T LF A +LI FAVSFAG+ LQN FP+IALL EK+GAL AA
Sbjct: 61 FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 111
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0
Query: 3 ANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLG 62
A+T H+TSLDM+ SFI I++RN G+ C S+CLP++I+MQ+ + +S +LG
Sbjct: 2 ASTSHQTSLDMSAFSSFIRTISQRNYGLGCCC-TPSNCLPVFIRMQQSPQATADSSQKLG 61
Query: 63 KIFLSLTFQAILALFFSLSSSSPPFPTVL--FGAVMLIGFAVSFAGVLLQNAFPKIALLL 122
KI LSL+FQA+LALF S +SPP P ++ F A + I FAVSFA + L N+FP+ A L
Sbjct: 62 KIILSLSFQAVLALFISSPPTSPP-PLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 121
Query: 123 EKLGALFAA 130
EK+GALF+A
Sbjct: 122 EKVGALFSA 128
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0050244.1 | 3.6e-35 | 68.94 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
KGN49806.1 | 8.1e-35 | 68.42 | hypothetical protein Csa_004683 [Cucumis sativus] | [more] |
XP_022146444.1 | 2.1e-30 | 63.20 | uncharacterized protein LOC111015658 [Momordica charantia] | [more] |
KAA0050246.1 | 3.8e-24 | 61.16 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
KGN49808.1 | 2.7e-22 | 50.39 | hypothetical protein Csa_004650 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BEH8 | 1.8e-35 | 68.94 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KQ03 | 3.9e-35 | 68.42 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
A0A6J1CY58 | 1.0e-30 | 63.20 | uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A5A7U7U1 | 1.8e-24 | 61.16 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KJP2 | 1.3e-22 | 50.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |