CmUC01G007350 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G007350
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
LocationCmU531Chr01: 7906661 .. 7908604 (-)
RNA-Seq ExpressionCmUC01G007350
SyntenyCmUC01G007350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGGTTGGCATGTGGCTTCTTCCTGCTAGCCTTCATTATATCATTCAAGTGAATTTGACAGAATGTGTATCCCAATTGTCCAAGTGTACAGAGGATGCACTTCTGTAGAATCCATGCCCATGTGTTTTGATCTCTTTTACCGTCTCTGATTCTTGACCTGGTGTGGTTCATCACCAAGACAACATCAGCTCCAATTTACCTGAAAAATCATGTTATTCTACAACTTAAAATGACATGATAACTCTGCCTGTGTCATGCATTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGCTCTCTCATTGGTGCAGACTGAGACAGAGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTGTCGAAGAAAAAAAAAAGGTTTACATATGTTTGAGTTGTGCAATTAATAGTGGAATGGGCATGTTATGTTGTAATATTGTTAGAAAAAATATCTATAAACTATGCTGTTATTCATACAACCTGGGTGACGCACAAACATAAGAACTACAACAAAGACAATAATAAATCAAGGTTTACAAGAACACCCGTCCATAACAAGAAAGAAACTCTCAGAGGTTGCAAAGAGAAGAAGTGTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCAAATAAAAGGAGAATTTCATTATTTCCTCACCAGTTCTACCTCAGCCATTTCATGCAAATAACAGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGGTCTGAGATACAAGTTCCCTGCAGACCATGAATTTTAGTGCTACCGGTATTGCTTGCTTACTTTCCCTAAATTATTTGAAAAGATCCAAATGGATAGTCGTCAACTTACCCAATCAAGCTATATATAATAAAAATATAAAGAAAGAAACAGGTAATTCGAAAGACAAGAAAAATGGATATGATAATTTCACCTCCAAACTGAAACACCAATAATATATATAATATGATGGAAAACAGCAAAACAGCAAAGCAATCAGAGAACTTTGAAGACCATAATGATATAAGTTCCACATCAGTTTCAGATAACAAAGTTTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG

mRNA sequence

ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG

Coding sequence (CDS)

ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG

Protein sequence

MAANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAAIEATKKRKGKTLISHNARMTASEKTDWPSFSYNKLTNSIQNATPIIEQTLLSRFKSYLHRFTYPQRIPKPHFPFNSNSGDIATKCNVKKHQANSNQRTLKALHNMS
Homology
BLAST of CmUC01G007350 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-35
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0

Query: 1   MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
           MA   PHE SLDMNELYSFITA+T RNPGISSCTWG  ASDCLPIYIKMQRP  SPVNS 
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRP--SPVNS- 60

Query: 61  PQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIAL 120
           PQ G  F+S  FQAIL LF +L  S PP  + L G VML  F  SF GVLLQ  FPKIA 
Sbjct: 61  PQFGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAH 120

Query: 121 LLEKLGALFAAI 131
           LL+  GAL AAI
Sbjct: 121 LLQMFGALLAAI 128

BLAST of CmUC01G007350 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 8.1e-35
Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0

Query: 1   MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
           MA   PHE SLDMN+L S I A+T RNPGISSCTWG  ASDCLPIYIKMQRP  SPVNS 
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRP--SPVNS- 60

Query: 61  PQLGKIFLSLTFQAILALFFSLS-SSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 120
           PQ G  FLSLTFQAI+ LF SL+ SSS P P+ LF AVML  F  S+ GV+LQ  FPK A
Sbjct: 61  PQFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120

Query: 121 LLLEKLGALFAAI 131
            LL+  GALFAAI
Sbjct: 121 QLLQTFGALFAAI 130

BLAST of CmUC01G007350 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-30
Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0

Query: 3   ANTPHETSLDMNELYSFITAITKRNPGISSCTWGA-----SDCLPIYIKMQRPSSSPVNS 62
           A+TP +TS+DMN L SFITAI +RN GISS TWG      SDCLPI I+MQRP   P  S
Sbjct: 2   ASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRP--PPAKS 61

Query: 63  PPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 122
              LGK  L LTFQA+LALF SL SS P  PT+LFGA +LI FAVSFAG+ LQ A+P++A
Sbjct: 62  SQSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMA 121

BLAST of CmUC01G007350 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-24
Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0

Query: 13  MNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPP---QLGKIFLSLT 72
           MNELYSFITAI +RNP I+S        LPI I MQRP  SP NS      +GK  L LT
Sbjct: 1   MNELYSFITAINERNPEINS--------LPICITMQRP--SPANSSKTENNVGKTILGLT 60

Query: 73  FQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAA 131
           FQA+LALF +  +SSPP  T LF A +LI FAVSFAG+ LQN FP+IALL EK+GAL AA
Sbjct: 61  FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 111

BLAST of CmUC01G007350 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-22
Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0

Query: 3   ANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLG 62
           A+T H+TSLDM+   SFI  I++RN G+  C    S+CLP++I+MQ+   +  +S  +LG
Sbjct: 2   ASTSHQTSLDMSAFSSFIRTISQRNYGLGCCC-TPSNCLPVFIRMQQSPQATADSSQKLG 61

Query: 63  KIFLSLTFQAILALFFSLSSSSPPFPTVL--FGAVMLIGFAVSFAGVLLQNAFPKIALLL 122
           KI LSL+FQA+LALF S   +SPP P ++  F A + I FAVSFA + L N+FP+ A L 
Sbjct: 62  KIILSLSFQAVLALFISSPPTSPP-PLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 121

Query: 123 EKLGALFAA 130
           EK+GALF+A
Sbjct: 122 EKVGALFSA 128

BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0

Query: 1   MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
           MA   PHE SLDMNELYSFITA+T RNPGISSCTWG  ASDCLPIYIKMQRP  SPVNS 
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRP--SPVNS- 60

Query: 61  PQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIAL 120
           PQ G  F+S  FQAIL LF +L  S PP  + L G VML  F  SF GVLLQ  FPKIA 
Sbjct: 61  PQFGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAH 120

Query: 121 LLEKLGALFAAI 131
           LL+  GAL AAI
Sbjct: 121 LLQMFGALLAAI 128

BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35
Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0

Query: 1   MAANTPHETSLDMNELYSFITAITKRNPGISSCTWG--ASDCLPIYIKMQRPSSSPVNSP 60
           MA   PHE SLDMN+L S I A+T RNPGISSCTWG  ASDCLPIYIKMQRP  SPVNS 
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRP--SPVNS- 60

Query: 61  PQLGKIFLSLTFQAILALFFSLS-SSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 120
           PQ G  FLSLTFQAI+ LF SL+ SSS P P+ LF AVML  F  S+ GV+LQ  FPK A
Sbjct: 61  PQFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120

Query: 121 LLLEKLGALFAAI 131
            LL+  GALFAAI
Sbjct: 121 QLLQTFGALFAAI 130

BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0

Query: 3   ANTPHETSLDMNELYSFITAITKRNPGISSCTWGA-----SDCLPIYIKMQRPSSSPVNS 62
           A+TP +TS+DMN L SFITAI +RN GISS TWG      SDCLPI I+MQRP   P  S
Sbjct: 2   ASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRP--PPAKS 61

Query: 63  PPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIA 122
              LGK  L LTFQA+LALF SL SS P  PT+LFGA +LI FAVSFAG+ LQ A+P++A
Sbjct: 62  SQSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMA 121

BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24
Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0

Query: 13  MNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPP---QLGKIFLSLT 72
           MNELYSFITAI +RNP I+S        LPI I MQRP  SP NS      +GK  L LT
Sbjct: 1   MNELYSFITAINERNPEINS--------LPICITMQRP--SPANSSKTENNVGKTILGLT 60

Query: 73  FQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAA 131
           FQA+LALF +  +SSPP  T LF A +LI FAVSFAG+ LQN FP+IALL EK+GAL AA
Sbjct: 61  FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 111

BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0

Query: 3   ANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLG 62
           A+T H+TSLDM+   SFI  I++RN G+  C    S+CLP++I+MQ+   +  +S  +LG
Sbjct: 2   ASTSHQTSLDMSAFSSFIRTISQRNYGLGCCC-TPSNCLPVFIRMQQSPQATADSSQKLG 61

Query: 63  KIFLSLTFQAILALFFSLSSSSPPFPTVL--FGAVMLIGFAVSFAGVLLQNAFPKIALLL 122
           KI LSL+FQA+LALF S   +SPP P ++  F A + I FAVSFA + L N+FP+ A L 
Sbjct: 62  KIILSLSFQAVLALFISSPPTSPP-PLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 121

Query: 123 EKLGALFAA 130
           EK+GALF+A
Sbjct: 122 EKVGALFSA 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050244.13.6e-3568.94putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KGN49806.18.1e-3568.42hypothetical protein Csa_004683 [Cucumis sativus][more]
XP_022146444.12.1e-3063.20uncharacterized protein LOC111015658 [Momordica charantia][more]
KAA0050246.13.8e-2461.16putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KGN49808.12.7e-2250.39hypothetical protein Csa_004650 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BEH81.8e-3568.94Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KQ033.9e-3568.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1[more]
A0A6J1CY581.0e-3063.20uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5A7U7U11.8e-2461.16Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KJP21.3e-2250.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G007350.1CmUC01G007350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane