CmUC01G007350 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGGTTGGCATGTGGCTTCTTCCTGCTAGCCTTCATTATATCATTCAAGTGAATTTGACAGAATGTGTATCCCAATTGTCCAAGTGTACAGAGGATGCACTTCTGTAGAATCCATGCCCATGTGTTTTGATCTCTTTTACCGTCTCTGATTCTTGACCTGGTGTGGTTCATCACCAAGACAACATCAGCTCCAATTTACCTGAAAAATCATGTTATTCTACAACTTAAAATGACATGATAACTCTGCCTGTGTCATGCATTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGCTCTCTCATTGGTGCAGACTGAGACAGAGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTGTCGAAGAAAAAAAAAAGGTTTACATATGTTTGAGTTGTGCAATTAATAGTGGAATGGGCATGTTATGTTGTAATATTGTTAGAAAAAATATCTATAAACTATGCTGTTATTCATACAACCTGGGTGACGCACAAACATAAGAACTACAACAAAGACAATAATAAATCAAGGTTTACAAGAACACCCGTCCATAACAAGAAAGAAACTCTCAGAGGTTGCAAAGAGAAGAAGTGTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCAAATAAAAGGAGAATTTCATTATTTCCTCACCAGTTCTACCTCAGCCATTTCATGCAAATAACAGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGGTCTGAGATACAAGTTCCCTGCAGACCATGAATTTTAGTGCTACCGGTATTGCTTGCTTACTTTCCCTAAATTATTTGAAAAGATCCAAATGGATAGTCGTCAACTTACCCAATCAAGCTATATATAATAAAAATATAAAGAAAGAAACAGGTAATTCGAAAGACAAGAAAAATGGATATGATAATTTCACCTCCAAACTGAAACACCAATAATATATATAATATGATGGAAAACAGCAAAACAGCAAAGCAATCAGAGAACTTTGAAGACCATAATGATATAAGTTCCACATCAGTTTCAGATAACAAAGTTTTCACTTGAAACGTGCAGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCCTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGAGGCAACAAAGAAAAGGAAAGGAAAGACTTTAATATCGCACAATGCTCGTATGACTGCAAGTGAGAAAACAGATTGGCCTAGCTTCTCTTACAACAAGTTAACCAATTCAATACAAAATGCTACTCCTATTATAGAGCAGACCCTCTTGTCGAGGTTCAAATCATATCTGCATCGATTCACTTATCCCCAAAGAATACCAAAGCCACATTTTCCCTTCAATTCAAATTCAGGAGATATAGCAACAAAATGCAATGTCAAAAAACATCAGGCCAACAGCAATCAGAGAACTTTGAAGGCATTGCACAATATGAGTTAG MAANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAAIEATKKRKGKTLISHNARMTASEKTDWPSFSYNKLTNSIQNATPIIEQTLLSRFKSYLHRFTYPQRIPKPHFPFNSNSGDIATKCNVKKHQANSNQRTLKALHNMS Homology
BLAST of CmUC01G007350 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 159.5 bits (402), Expect = 3.6e-35 Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0
BLAST of CmUC01G007350 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 8.1e-35 Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of CmUC01G007350 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia]) HSP 1 Score: 143.7 bits (361), Expect = 2.1e-30 Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of CmUC01G007350 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 122.9 bits (307), Expect = 3.8e-24 Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of CmUC01G007350 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 2.7e-22 Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35 Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 0
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35 Identity = 91/133 (68.42%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30 Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24 Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of CmUC01G007350 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22 Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|