CmUC01G005630 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G005630
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr01: 5751049 .. 5751729 (-)
RNA-Seq Expression	CmUC01G005630
Synteny	CmUC01G005630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGCGTGTGGTTACAGAGATGGGAAGGCGCGTGAGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAAGGAAGAGGAGTGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTGACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGGGCGGAGAAGAGGAGGGAGAGGCGGTGGGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGTTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATTTTGGATTTGGAGACAATACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGAGGGAACAAATGTGA

mRNA sequence

ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGCGTGTGGTTACAGAGATGGGAAGGCGCGTGAGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAAGGAAGAGGAGTGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTGACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGGGCGGAGAAGAGGAGGGAGAGGCGGTGGGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGTTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATTTTGGATTTGGAGACAATACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGAGGGAACAAATGTGA

Coding sequence (CDS)

ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGCGTGTGGTTACAGAGATGGGAAGGCGCGTGAGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAAGGAAGAGGAGTGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTGACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGGGCGGAGAAGAGGAGGGAGAGGCGGTGGGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGTTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATTTTGGATTTGGAGACAATACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGAGGGAACAAATGTGA

Protein sequence

MDFGSRKRLQCGGFFGEEAGGEGAISVRVKVSAGGVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEGLGRGGEGVFMEEGELQIVGGGGIGIGELCEREEKKNEMEEGGNGERCWLHFGFGDNTEMRKTKKTRMRREQM

Homology

[Close]

BLAST of CmUC01G005630 vs. NCBI nr
Match: KAF7827865.1 (glycine-rich cell wall structural protein 1.0-like [Senna tora])

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-20
Identity = 78/144 (54.17%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 17  EEAGGEGAISVRVKVSAGGVEARVVTEM-GRRVREETAVRVVAVKRREGRGVAGEEGGGG 76
           EE  G+G + V + VS   V+  +VT + G RV +E A RVVA+   E  GVAGEEGG G
Sbjct: 121 EEPAGDGPVRVGILVSTRAVDPGMVTVVTGFRVGDEAAGRVVAMVGGECGGVAGEEGGSG 180

Query: 77  RVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRAR 136
             + AVAAGGA DP+E+AA + DEEEAL R A +E+DEVLAGAGGGAGDE GFE G    
Sbjct: 181 WAVGAVAAGGALDPDEIAAGVGDEEEALRRSADSEIDEVLAGAGGGAGDEGGFEGGAAVE 240

Query: 137 GEGEGGEEEGEAVGVGGEGLGRGG 160
           G        GE V VGGE +G  G
Sbjct: 241 G--------GETVEVGGEKVGGRG 256

[Close]

BLAST of CmUC01G005630 vs. NCBI nr
Match: KAB8681452.1 (hypothetical protein FH972_026331 [Carpinus fangiana])

HSP 1 Score: 78.6 bits (192), Expect = 7.8e-11
Identity = 62/124 (50.00%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 14  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGE 73
           F GEEA G+GA+SV V V+A GVE   A VV     RV +E A  V  +   EG G+AGE
Sbjct: 25  FLGEEATGKGAVSVGVLVTARGVEPEPAGVVVVGAWRVGDEPARGVEVMVGGEGGGMAGE 84

Query: 74  EGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERG 132
           EGG G +  + A    GGA DP+EV A + DEEE L RGA+ +  +VL GAGGG GD  G
Sbjct: 85  EGGYGDLGGSGAIGFIGGALDPDEVVAGVGDEEEGLRRGAQAQGHKVLVGAGGGPGDHWG 144

[Close]

BLAST of CmUC01G005630 vs. NCBI nr
Match: KDO70110.1 (hypothetical protein CISIN_1g029800mg [Citrus sinensis])

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-09
Identity = 69/142 (48.59%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 35  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAA 94
           GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA
Sbjct: 57  GVIARVVARVG---DEALTGGVEAVVGREGGGVAGEKGGTGGAEGAVAAGRAGDPDEVAA 116

Query: 95  SISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEG 154
            I +EEE L RGA+ E DEVLAGAGG AG +  FE         E GE + +        
Sbjct: 117 GIGNEEEVLRRGAEVEGDEVLAGAGGSAGSDGRFE-------VVEMGEIKRD-------- 176

Query: 155 LGRGGEGVFMEEGELQIVGGGG 177
            G GG   F+E+ E +I  GGG
Sbjct: 177 -GTGGMVSFVEKWEFEIFCGGG 179

[Close]

BLAST of CmUC01G005630 vs. NCBI nr
Match: GAY47055.1 (hypothetical protein CUMW_101650 [Citrus unshiu])

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-09
Identity = 69/142 (48.59%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 35  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAA 94
           GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA
Sbjct: 20  GVIARVVARVG---DEALTGGVEAVVGREGGGVAGEKGGTGGAEGAVAAGRAGDPDEVAA 79

Query: 95  SISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEG 154
            I +EEE L RGA+ E DEVLAGAGG AG +  FE         E GE + +        
Sbjct: 80  GIGNEEEVLRRGAEVEGDEVLAGAGGSAGSDGRFE-------VVEMGEIKRD-------- 139

Query: 155 LGRGGEGVFMEEGELQIVGGGG 177
            G GG   F+E+ E +I  GGG
Sbjct: 140 -GTGGMVSFVEKWEFEIFCGGG 142

[Close]

BLAST of CmUC01G005630 vs. NCBI nr
Match: XP_011468691.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-06
Identity = 49/90 (54.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 66  GVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDE 125
           GVAGE+GG G    A  AGGA +P+EV A + DEEE L RGA+ EVDEVLAGA GGA D+
Sbjct: 41  GVAGEKGGAGEAAGARFAGGAAEPDEVVACVGDEEEGLQRGAEAEVDEVLAGASGGARDD 100

Query: 126 RGFESGVRARGEGEGGEEEGEAVGVG-GEG 155
            G   G    G   GG      +GVG GEG
Sbjct: 101 GG---GGGGNGGQRGGGSRTRGLGVGVGEG 127

[Close]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL
Match: A0A5N6L4M9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_026331 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-11
Identity = 62/124 (50.00%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 14  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGE 73
           F GEEA G+GA+SV V V+A GVE   A VV     RV +E A  V  +   EG G+AGE
Sbjct: 25  FLGEEATGKGAVSVGVLVTARGVEPEPAGVVVVGAWRVGDEPARGVEVMVGGEGGGMAGE 84

Query: 74  EGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERG 132
           EGG G +  + A    GGA DP+EV A + DEEE L RGA+ +  +VL GAGGG GD  G
Sbjct: 85  EGGYGDLGGSGAIGFIGGALDPDEVVAGVGDEEEGLRRGAQAQGHKVLVGAGGGPGDHWG 144

[Close]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL
Match: A0A1D1YVI8 (Uncharacterized protein (Fragment) OS=Anthurium amnicola OX=1678845 GN=g.22794 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.2e-10
Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 9   LQCGGFFGEEAGGEGAISVRVKVSAGGVEARVVTEMGR---RVREETAVRVVAVKRREGR 68
           ++ GG  GEEAGG G + VRV V+AG V+A       R   RVR ETA+ VVAV+  EG 
Sbjct: 70  IEGGGLPGEEAGGRGVVGVRVAVAAGAVDAGAWAGRPRPRVRVRYETALPVVAVEWGEGG 129

Query: 69  GVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDE 100
           GVAGEEGG  RV  A AA GA  P+EVAA + DE
Sbjct: 130 GVAGEEGGARRVSGAFAARGAPHPDEVAAGVGDE 163

[Close]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL
Match: A0A067FVC2 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029800mg PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.6e-09
Identity = 69/142 (48.59%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 35  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAA 94
           GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA
Sbjct: 57  GVIARVVARVG---DEALTGGVEAVVGREGGGVAGEKGGTGGAEGAVAAGRAGDPDEVAA 116

Query: 95  SISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEG 154
            I +EEE L RGA+ E DEVLAGAGG AG +  FE         E GE + +        
Sbjct: 117 GIGNEEEVLRRGAEVEGDEVLAGAGGSAGSDGRFE-------VVEMGEIKRD-------- 176

Query: 155 LGRGGEGVFMEEGELQIVGGGG 177
            G GG   F+E+ E +I  GGG
Sbjct: 177 -GTGGMVSFVEKWEFEIFCGGG 179

[Close]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL
Match: A0A2H5P4P8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101650 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.6e-09
Identity = 69/142 (48.59%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 35  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAA 94
           GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA
Sbjct: 20  GVIARVVARVG---DEALTGGVEAVVGREGGGVAGEKGGTGGAEGAVAAGRAGDPDEVAA 79

Query: 95  SISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEG 154
            I +EEE L RGA+ E DEVLAGAGG AG +  FE         E GE + +        
Sbjct: 80  GIGNEEEVLRRGAEVEGDEVLAGAGGSAGSDGRFE-------VVEMGEIKRD-------- 139

Query: 155 LGRGGEGVFMEEGELQIVGGGG 177
            G GG   F+E+ E +I  GGG
Sbjct: 140 -GTGGMVSFVEKWEFEIFCGGG 142

[Close]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL
Match: A0A5N6R0R7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008121 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.1e-05
Identity = 50/101 (49.50%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 14  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGE 73
           F GEEA  +GAI V V V+A GVE   A VV     +V +E    V AV   EG GVAGE
Sbjct: 26  FLGEEATSKGAIGVGVLVAARGVELESAGVVVVGVWQVGDEPTRGVEAVVGGEGGGVAGE 85

Query: 74  EGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGAK 109
           EGG G V  + A    GGA DP+EV A +  EEE L  GA+
Sbjct: 86  EGGSGDVGGSEAIGFTGGALDPDEVVAGVGYEEEGLRLGAQ 126

The following BLAST results are available for this feature:

BLAST of CmUC01G005630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7827865.1	4.2e-20	54.17	glycine-rich cell wall structural protein 1.0-like [Senna tora]	[more]
KAB8681452.1	7.8e-11	50.00	hypothetical protein FH972_026331 [Carpinus fangiana]	[more]
KDO70110.1	9.6e-09	48.59	hypothetical protein CISIN_1g029800mg [Citrus sinensis]	[more]
GAY47055.1	9.6e-09	48.59	hypothetical protein CUMW_101650 [Citrus unshiu]	[more]
XP_011468691.1	1.5e-06	54.44	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Fragaria vesca su...	[more]

BLAST of CmUC01G005630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC01G005630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6L4M9	3.8e-11	50.00	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_026331 PE=4 SV=1	[more]
A0A1D1YVI8	4.2e-10	55.32	Uncharacterized protein (Fragment) OS=Anthurium amnicola OX=1678845 GN=g.22794 P...	[more]
A0A067FVC2	4.6e-09	48.59	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029800mg PE=4 SV=1	[more]
A0A2H5P4P8	4.6e-09	48.59	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101650 PE=4 SV=1	[more]
A0A5N6R0R7	9.1e-05	49.50	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008121 PE=4 SV=1	[more]

BLAST of CmUC01G005630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G005630.1	CmUC01G005630.1	mRNA