Clc11G19940 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G19940
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr11: 30398074 .. 30398979 (+)
RNA-Seq ExpressionClc11G19940
SyntenyClc11G19940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCCGGTGGCCCTGTCAGAACGGTACGATGTAAGGACGCTTCAGACGAGCATGTTTTGCCATTCATCACGGTGGAGGATCACCGTGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCGGTGGCGGTGCTTTGTCACGGGCGCTTAAGGCCGTCTTATTTGGAACTTCATTGGTTTGTCCGCCGATCTAAAACGCGTTTTGATATCGTAGCAATTTCGTTCTCTGTTTTTCTTTTTCTGCGATTGATTTACTTCGATCATTCGATTGATGTCTTTGGGTGTTGCAGGCGAAGAAGATCAGAAAAAGGAAAGCAAAAGAAAAACAAAATTCGAAGGAGAATCAAAGGCATCAAACTCCGTTCTCAATTAGCAACAGCAGATCAAGAATTGCTTCAGATCTAAATTACCACAACTCTTCTACCTGTTCTTCGCGTACTTCGGCGCTATTTTCATCCTCCTCCTTCTGCAGTTCGTCTCCTGCCTCCTCGGAAATGAGCGACATATCGTTTCGATTTTATCCAACTGCACCGAATCGATTGTTCAGACAAATTAATTTCAGGAAAATCTTCAGTGGTTGGTTTGTGTTACTGGTATGTCTTCTAAGCTTGGTCTTATGGGGAAAAATCGGAGCTATTATCTGCACTTCGGTTTGGATCCTCTGTTTATACCGGCGGAGGATCGGATTCAGGTCACCGGACAACAAGTCCAGTGCGGCGGCGATAAGTTACGGGGAATACAATAAGAGAAGAACCGTCATGGAAGGATTTCTGAAGAGAGACCGTTCACGTGCTCAGAATTCAATCTTCCGCATTGATTGA

mRNA sequence

ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCCGGTGGCCCTGTCAGAACGGTACGATGTAAGGACGCTTCAGACGAGCATGTTTTGCCATTCATCACGGTGGAGGATCACCGTGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCGGTGGCGGTGCTTTGTCACGGGCGCTTAAGGCCGTCTTATTTGGAACTTCATTGGTTTTGTTGCAGGCGAAGAAGATCAGAAAAAGGAAAGCAAAAGAAAAACAAAATTCGAAGGAGAATCAAAGGCATCAAACTCCGTTCTCAATTAGCAACAGCAGATCAAGAATTGCTTCAGATCTAAATTACCACAACTCTTCTACCTGTTCTTCGCGTACTTCGGCGCTATTTTCATCCTCCTCCTTCTGCAGTTCGTCTCCTGCCTCCTCGGAAATGAGCGACATATCGTTTCGATTTTATCCAACTGCACCGAATCGATTGTTCAGACAAATTAATTTCAGGAAAATCTTCAGTGGTTGGTTTGTGTTACTGGTATGTCTTCTAAGCTTGGTCTTATGGGGAAAAATCGGAGCTATTATCTGCACTTCGGTTTGGATCCTCTGTTTATACCGGCGGAGGATCGGATTCAGGTCACCGGACAACAAGTCCAGTGCGGCGGCGATAAGTTACGGGGAATACAATAAGAGAAGAACCGTCATGGAAGGATTTCTGAAGAGAGACCGTTCACGTGCTCAGAATTCAATCTTCCGCATTGATTGA

Coding sequence (CDS)

ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCCGGTGGCCCTGTCAGAACGGTACGATGTAAGGACGCTTCAGACGAGCATGTTTTGCCATTCATCACGGTGGAGGATCACCGTGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCGGTGGCGGTGCTTTGTCACGGGCGCTTAAGGCCGTCTTATTTGGAACTTCATTGGTTTTGTTGCAGGCGAAGAAGATCAGAAAAAGGAAAGCAAAAGAAAAACAAAATTCGAAGGAGAATCAAAGGCATCAAACTCCGTTCTCAATTAGCAACAGCAGATCAAGAATTGCTTCAGATCTAAATTACCACAACTCTTCTACCTGTTCTTCGCGTACTTCGGCGCTATTTTCATCCTCCTCCTTCTGCAGTTCGTCTCCTGCCTCCTCGGAAATGAGCGACATATCGTTTCGATTTTATCCAACTGCACCGAATCGATTGTTCAGACAAATTAATTTCAGGAAAATCTTCAGTGGTTGGTTTGTGTTACTGGTATGTCTTCTAAGCTTGGTCTTATGGGGAAAAATCGGAGCTATTATCTGCACTTCGGTTTGGATCCTCTGTTTATACCGGCGGAGGATCGGATTCAGGTCACCGGACAACAAGTCCAGTGCGGCGGCGATAAGTTACGGGGAATACAATAAGAGAAGAACCGTCATGGAAGGATTTCTGAAGAGAGACCGTTCACGTGCTCAGAATTCAATCTTCCGCATTGATTGA

Protein sequence

MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVEDHRVRPLDGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSKENQRHQTPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID
Homology
BLAST of Clc11G19940 vs. NCBI nr
Match: XP_038900051.1 (uncharacterized protein LOC120087211 [Benincasa hispida])

HSP 1 Score: 415.2 bits (1066), Expect = 4.2e-112
Identity = 229/268 (85.45%), Postives = 238/268 (88.81%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCK-DASDEHVLPFITVEDHRVRPLDGGD 60
           MDSI A KSKKKNKLFPCFRAAASGGPV T RCK DASDEH+ PFITV+D  VR  DGGD
Sbjct: 1   MDSITAIKSKKKNKLFPCFRAAASGGPVGTARCKEDASDEHIFPFITVDD-GVRSFDGGD 60

Query: 61  GDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSK-ENQRHQTPFSI 120
           GDSGHRKKK GGGALSRA+KAVLFGTSL    AKKIRKRKAKEKQNSK ENQRHQ PFSI
Sbjct: 61  GDSGHRKKKNGGGALSRAVKAVLFGTSL----AKKIRKRKAKEKQNSKTENQRHQAPFSI 120

Query: 121 SNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLFRQ 180
           SN+RSRIASDLNYHNSSTCSSRTSA FSSSSFCSSSP+SSEMSDISFRFYPTA NRLFRQ
Sbjct: 121 SNNRSRIASDLNYHNSSTCSSRTSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQ 180

Query: 181 INFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAISY 240
           INF KIFSGWF+LLVCLLSLVLWGKIGAIICTSVWILCLYRRRIG +S D+K SA A+S 
Sbjct: 181 INFGKIFSGWFLLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGLKSSDDKVSAGAMSS 240

Query: 241 GEYNKRRTVMEGFLKRDRSRAQNSIFRI 267
           GEY KRR VMEGFLKRD S AQNSI RI
Sbjct: 241 GEYYKRRVVMEGFLKRDHSGAQNSILRI 263

BLAST of Clc11G19940 vs. NCBI nr
Match: XP_011652374.1 (uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetical protein Csa_001877 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 1.7e-89
Identity = 202/271 (74.54%), Postives = 216/271 (79.70%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVEDHRVRPLDGGDG 60
           MD+IA  K KKKNKLFPCFR+AASGG    VR KD S E V PFITV D  VRPL GGDG
Sbjct: 1   MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGS-EDVFPFITV-DENVRPLYGGDG 60

Query: 61  DSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSKE--NQRHQTPFSI 120
           DSGHRKKKG  GA SRALKAVLFGTSL    AKKIRKRK KE QNSK+  NQRHQ P SI
Sbjct: 61  DSGHRKKKGSAGAFSRALKAVLFGTSL----AKKIRKRKEKENQNSKKEINQRHQAPSSI 120

Query: 121 SNSRSRIASD-LN-YHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLF 180
            N+RSR ASD LN Y NSST SSRTSA FSSSSFCSSSPASSEMS+ISFRFYP   NRL 
Sbjct: 121 GNNRSRTASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLL 180

Query: 181 RQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAI 240
           RQIN +KIFSGWFVL+VCLL+LVLWGK+GAI+CTSVWILCLYRRR+G +    K SA   
Sbjct: 181 RQINLKKIFSGWFVLVVCLLNLVLWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVGT 240

Query: 241 SYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
           S GEY+KRR  MEGFLKRDRS AQNS+ RID
Sbjct: 241 SSGEYSKRRIGMEGFLKRDRSSAQNSMLRID 261

BLAST of Clc11G19940 vs. NCBI nr
Match: KAA0036754.1 (uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95821.1 uncharacterized protein E5676_scaffold110G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 326.2 bits (835), Expect = 2.6e-85
Identity = 198/271 (73.06%), Postives = 210/271 (77.49%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVEDHRVRPLDGGDG 60
           MDSIA  KSKKKNKLFPCFRAAASG     VR KD S E V PFITV D  VRPL G DG
Sbjct: 1   MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDS-EDVFPFITV-DENVRPLCGCDG 60

Query: 61  DSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSKE--NQRHQTPFSI 120
           DSGHRKKKG  GALSRA KAVLFGTSL    AKKIRKRKAKEK+NSK   NQ HQ   SI
Sbjct: 61  DSGHRKKKGSAGALSRAFKAVLFGTSL----AKKIRKRKAKEKENSKNEINQMHQALSSI 120

Query: 121 SNSRSRIASDLN-YHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLFR 180
            N     + +LN YHNSST SSRTSA FSSSSFCSSSPASSEMS+ISFRFYP   NRL R
Sbjct: 121 GNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLR 180

Query: 181 QINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAIS 240
           QIN RKI SGWFVLLVCLL+L+LWGK+GAI+CTSVWILCLYRRR+G +    K SA A+S
Sbjct: 181 QINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMS 240

Query: 241 YGEYNKRRTVMEGFLKRDR-SRAQNSIFRID 268
            GEY KRR  MEGFLKR+R S AQNSI RID
Sbjct: 241 SGEYYKRRIGMEGFLKRERSSSAQNSILRID 261

BLAST of Clc11G19940 vs. NCBI nr
Match: XP_022981581.1 (uncharacterized protein LOC111480657 isoform X1 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 6.1e-79
Identity = 186/276 (67.39%), Postives = 209/276 (75.72%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVED------HRVRP 60
           MDS AATKSKK  K FPCFR+ AS  PVRTVR  DA+DE V PF+ VE+      H V+P
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSSPVRTVRGMDAADEQVFPFMAVEERNGMMLHNVQP 60

Query: 61  LDGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNS-KENQRHQ 120
            DG    SG +KK GGGGALSRALKAVLFGTSL    AKKIRKRK K+K+NS +ENQR Q
Sbjct: 61  FDGCGDVSGRQKKGGGGGALSRALKAVLFGTSL----AKKIRKRKRKQKENSNEENQRRQ 120

Query: 121 TPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPN 180
              SIS SRS   SD N+ NSSTCSSR SA FSS+SFCSSSP SSE+++ISFRF+PTA N
Sbjct: 121 LLSSIS-SRS---SDPNFRNSSTCSSRISAPFSSTSFCSSSPTSSEINEISFRFHPTASN 180

Query: 181 RLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILC--LYRRRIGFRSPDNKS 240
           RLFRQIN R     WFVLLVCLLSLVLW KIGA +CTS+WILC   YRR IGFRSPD+K+
Sbjct: 181 RLFRQINLRNTSRCWFVLLVCLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKA 240

Query: 241 SAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
           SAAA+S  EY K RT++EGFL RDRS  +NSI  ID
Sbjct: 241 SAAAMSSDEYRK-RTILEGFLNRDRSAVRNSITHID 265

BLAST of Clc11G19940 vs. NCBI nr
Match: XP_022941268.1 (uncharacterized protein LOC111446618 isoform X1 [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 8.8e-78
Identity = 184/276 (66.67%), Postives = 210/276 (76.09%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVED------HRVRP 60
           MDS AATKSKK  K FPCFR+ AS GPVRTVR  +A+DE V PF+ VE+      H V+P
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60

Query: 61  LDGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNS-KENQRHQ 120
            DG    SG +KK GGGGALSRALKAVLFGTSL    AKKIRK+K K+K+NS +ENQR +
Sbjct: 61  FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSL----AKKIRKKKRKQKENSNEENQRRR 120

Query: 121 TPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPN 180
              SIS SRS   SD N+ NSSTCSSRTSA FSS+SFCSSSP S E+ +ISFRF+PTA N
Sbjct: 121 LLSSIS-SRS---SDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASN 180

Query: 181 RLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILC--LYRRRIGFRSPDNKS 240
           RLFRQIN RK    WFVLLV LLSLVLW KIGA +CTS+WILC   YRR IGFRSPD+K+
Sbjct: 181 RLFRQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKA 240

Query: 241 SAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
           SAAA+S  EY K+RT++EGFL RDRS  +NSI  ID
Sbjct: 241 SAAAMSSDEY-KKRTILEGFLNRDRSAVRNSITHID 265

BLAST of Clc11G19940 vs. ExPASy TrEMBL
Match: A0A5A7SZR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001060 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.2e-85
Identity = 198/271 (73.06%), Postives = 210/271 (77.49%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVEDHRVRPLDGGDG 60
           MDSIA  KSKKKNKLFPCFRAAASG     VR KD S E V PFITV D  VRPL G DG
Sbjct: 1   MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDS-EDVFPFITV-DENVRPLCGCDG 60

Query: 61  DSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSKE--NQRHQTPFSI 120
           DSGHRKKKG  GALSRA KAVLFGTSL    AKKIRKRKAKEK+NSK   NQ HQ   SI
Sbjct: 61  DSGHRKKKGSAGALSRAFKAVLFGTSL----AKKIRKRKAKEKENSKNEINQMHQALSSI 120

Query: 121 SNSRSRIASDLN-YHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLFR 180
            N     + +LN YHNSST SSRTSA FSSSSFCSSSPASSEMS+ISFRFYP   NRL R
Sbjct: 121 GNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLR 180

Query: 181 QINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAIS 240
           QIN RKI SGWFVLLVCLL+L+LWGK+GAI+CTSVWILCLYRRR+G +    K SA A+S
Sbjct: 181 QINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMS 240

Query: 241 YGEYNKRRTVMEGFLKRDR-SRAQNSIFRID 268
            GEY KRR  MEGFLKR+R S AQNSI RID
Sbjct: 241 SGEYYKRRIGMEGFLKRERSSSAQNSILRID 261

BLAST of Clc11G19940 vs. ExPASy TrEMBL
Match: A0A6J1IWY5 (uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480657 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.9e-79
Identity = 186/276 (67.39%), Postives = 209/276 (75.72%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVED------HRVRP 60
           MDS AATKSKK  K FPCFR+ AS  PVRTVR  DA+DE V PF+ VE+      H V+P
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSSPVRTVRGMDAADEQVFPFMAVEERNGMMLHNVQP 60

Query: 61  LDGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNS-KENQRHQ 120
            DG    SG +KK GGGGALSRALKAVLFGTSL    AKKIRKRK K+K+NS +ENQR Q
Sbjct: 61  FDGCGDVSGRQKKGGGGGALSRALKAVLFGTSL----AKKIRKRKRKQKENSNEENQRRQ 120

Query: 121 TPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPN 180
              SIS SRS   SD N+ NSSTCSSR SA FSS+SFCSSSP SSE+++ISFRF+PTA N
Sbjct: 121 LLSSIS-SRS---SDPNFRNSSTCSSRISAPFSSTSFCSSSPTSSEINEISFRFHPTASN 180

Query: 181 RLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILC--LYRRRIGFRSPDNKS 240
           RLFRQIN R     WFVLLVCLLSLVLW KIGA +CTS+WILC   YRR IGFRSPD+K+
Sbjct: 181 RLFRQINLRNTSRCWFVLLVCLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKA 240

Query: 241 SAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
           SAAA+S  EY K RT++EGFL RDRS  +NSI  ID
Sbjct: 241 SAAAMSSDEYRK-RTILEGFLNRDRSAVRNSITHID 265

BLAST of Clc11G19940 vs. ExPASy TrEMBL
Match: A0A6J1FRN0 (uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446618 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 4.3e-78
Identity = 184/276 (66.67%), Postives = 210/276 (76.09%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVED------HRVRP 60
           MDS AATKSKK  K FPCFR+ AS GPVRTVR  +A+DE V PF+ VE+      H V+P
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60

Query: 61  LDGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNS-KENQRHQ 120
            DG    SG +KK GGGGALSRALKAVLFGTSL    AKKIRK+K K+K+NS +ENQR +
Sbjct: 61  FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSL----AKKIRKKKRKQKENSNEENQRRR 120

Query: 121 TPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPN 180
              SIS SRS   SD N+ NSSTCSSRTSA FSS+SFCSSSP S E+ +ISFRF+PTA N
Sbjct: 121 LLSSIS-SRS---SDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASN 180

Query: 181 RLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILC--LYRRRIGFRSPDNKS 240
           RLFRQIN RK    WFVLLV LLSLVLW KIGA +CTS+WILC   YRR IGFRSPD+K+
Sbjct: 181 RLFRQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKA 240

Query: 241 SAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
           SAAA+S  EY K+RT++EGFL RDRS  +NSI  ID
Sbjct: 241 SAAAMSSDEY-KKRTILEGFLNRDRSAVRNSITHID 265

BLAST of Clc11G19940 vs. ExPASy TrEMBL
Match: A0A6J1F8B9 (uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC111443063 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 8.0e-77
Identity = 179/267 (67.04%), Postives = 200/267 (74.91%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVEDHRVRPLDGGDG 60
           M+SI  TKSKK+NKLFPCFRAAASG PV       A +E V PF+TV D+ V P+D GD 
Sbjct: 1   MESIVVTKSKKRNKLFPCFRAAASGSPVG----HGAPEEQVFPFMTVRDN-VLPVDRGDE 60

Query: 61  DSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNSKENQRHQTPFSISN 120
           DS   KKKGG GA SRA++AV+FGTSL    AKKI KRKAK  QNSKE+QRH  P S  +
Sbjct: 61  DSSRWKKKGGRGAWSRAIRAVIFGTSL----AKKIAKRKAKHYQNSKESQRHLAP-SWFS 120

Query: 121 SRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFYPTAPNRLFRQIN 180
           SRSR  SDLNY N ST   R+S  FSS SF SSSP+S+E SD SFR YPTA NRL+ QIN
Sbjct: 121 SRSRSGSDLNYRNYST---RSSEPFSSPSFYSSSPSSTEKSDSSFRLYPTASNRLYTQIN 180

Query: 181 FRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPDNKSSAAAISYGE 240
           FRKIFSGWFVLLVCLLSLVLWGK GAIICTSVW+LCLYR R  FRSPD+K+S  A+S GE
Sbjct: 181 FRKIFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCLYRWRFRFRSPDDKASTVAMSSGE 240

Query: 241 YNKRRTVMEGFLKRDRSRAQNSIFRID 268
           YN    +ME FLKRDR  A+NS  RID
Sbjct: 241 YNDIE-IMEEFLKRDRLAARNSTLRID 253

BLAST of Clc11G19940 vs. ExPASy TrEMBL
Match: A0A6J1CDH5 (uncharacterized protein LOC111010543 OS=Momordica charantia OX=3673 GN=LOC111010543 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.3e-74
Identity = 180/279 (64.52%), Postives = 207/279 (74.19%), Query Frame = 0

Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDASDEHVLPFITVED------HRVRP 60
           MDS AA KS+KK KLFPCFR+ AS   VRT RCKD  DE V P + VE+      H VR 
Sbjct: 1   MDSDAA-KSRKKTKLFPCFRSPASDCYVRTERCKDVPDEKVFPLMAVEEMDGTMFHSVRS 60

Query: 61  L----DGGDGDSGHRKKKGGGGALSRALKAVLFGTSLVLLQAKKIRKRKAKEKQNS-KEN 120
           +    D  D DSG RK+KG GGALSRA+KAVLFGT+L    AKK+RK+KAK+KQNS KEN
Sbjct: 61  VASSKDADDEDSGCRKRKGSGGALSRAIKAVLFGTAL----AKKMRKKKAKQKQNSKKEN 120

Query: 121 Q-RHQTPFSISNSRSRIASDLNYHNSSTCSSRTSALFSSSSFCSSSPASSEMSDISFRFY 180
           Q RH +  SIS+ RSRIASD  YHN S  SSRTS  FSSSSFCSSSP+SS++S+ SF  Y
Sbjct: 121 QIRHHSVSSISD-RSRIASD-PYHNYSNFSSRTSMPFSSSSFCSSSPSSSDISERSFAIY 180

Query: 181 PTAPNRLFRQINFRKIFSGWFVLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGFRSPD 240
           PTAP RLF QIN R+I SGW + LVC+LSL+LWGKI AI+CTSVWILC   RR GF+SP+
Sbjct: 181 PTAPKRLFSQINLRRICSGWLMFLVCILSLILWGKICAIVCTSVWILCFSSRRFGFKSPE 240

Query: 241 NKSSAAAISYGEYNKRRTVMEGFLKRDRSRAQNSIFRID 268
            K+SAAAI  GE+NK R V+EG L RDRS AQNS  RID
Sbjct: 241 IKASAAAIDSGEHNK-RIVIEGLLARDRSAAQNSSLRID 271

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900051.14.2e-11285.45uncharacterized protein LOC120087211 [Benincasa hispida][more]
XP_011652374.11.7e-8974.54uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetica... [more]
KAA0036754.12.6e-8573.06uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95... [more]
XP_022981581.16.1e-7967.39uncharacterized protein LOC111480657 isoform X1 [Cucurbita maxima][more]
XP_022941268.18.8e-7866.67uncharacterized protein LOC111446618 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SZR01.2e-8573.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1IWY52.9e-7967.39uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FRN04.3e-7866.67uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1F8B98.0e-7767.04uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC1114430... [more]
A0A6J1CDH58.3e-7464.52uncharacterized protein LOC111010543 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..68
NoneNo IPR availablePANTHERPTHR34379:SF6PROTEIN, PUTATIVE-RELATEDcoord: 2..257
IPR040411Uncharacterized protein At5g23160-likePANTHERPTHR34379OS07G0553800 PROTEINcoord: 2..257

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G19940.2Clc11G19940.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane