Clc11G14000 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G14000
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	G-patch domain-containing protein
Location	ClcChr11: 24904461 .. 24909996 (+)
RNA-Seq Expression	Clc11G14000
Synteny	Clc11G14000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGGTAAGAAAATACTTTTTTCTTTTCTTTTTTTCTTTTTTTGGGCGAAGGACGAAAATACCTTTGTTCTATAAATAAATACATTTTTTTTGTAAAATTAAATTAAATCAATAAAATAAATATACATTTGTAGCATTTTTATTACGTTCAATTTATTTGAAGACAAATATTTTTATGTAGGTTGCACCTTTTTTTTTTCATGTATAACACTTTTTTTAATAATATTTTTTAATATTTATTTCTATTGTCTAATTGGAATGAACTTTATTTACAAAAAAAAAAAAAAAAAAAAAAGAGTGTAGTGTATGATGCACCAAATATAGTTTTTATCTAAGTTATACTTTTTAATTTGGTTAACACCACGTTTTCTTGGACTTAATATTTATTGTTTATTTGAACTACGATGCTAGAAAAAAGTATGGTATATGGATATTATAAACATCATATAATCTTTGGTCAAGTGGAGGAAGTGTGCAATAGTTGCTAAACTAGTTTGATAAAATTTGTTTAAAAGAATGTGCCTAAAATAACTTTTATTACTTACATACCGTTGAATTCATTGGTTATGTTTGTTTAGTTGTTGACTATGACACATCGATTATATCAAATGTGTCAAAGCAAACTAAACTCAATTGACACATGTTATAAGTTAGCAACTAAGATGTAGTGGTGCGAATCTCACACCCTTGATTATCATCATATTTTATGCTAAGAAATTATTTTATTTAACAAGTTTACCGCAACATGGTTGTGCCCGATAAACATCATATGCAATTTAAAAGCTCTATAGGCTATTCAAATACATGTTATAAATAAAATTCTAAATTACCTCTCACACATCTAATGACAAATCATATATAAACTACACTATGGCGATTTTATATATATACAACTGCGTGTATAAGTGAAATACATATCGTTGATGCAATCAAACAATTCATCTTATTCACATGCAATAACTTTCAAAAGAACTTGACGAGCAAAATAACAAAATACGTACTCATTTAGTAATTGTTACACCAACTCTGATACCTAAGTCTAATACCTAATATACGTATTCCATCGACGACATTAAATTTTCATTCCATCAACATAGCAACAATTTCATTGATATTTTCACAATTTCAAGAGTTGAATATTTATACCAAGGGTAAGTTAATATTTTTATTACATGTTGAGAAATTTATAAAATAACACAAAGTAATACAATAATAAAATAAAAGGTCGCCGATGTAAAATATTTTATTATTGATTAATTATAACTTTTCTTGAATTTTTTGATTTTATAATTTTCCAAAAAATATCCATCCCATAATTGTCATGTCACACCAAGTCGCATGCAATAGCTAATCGAATTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGGTTAGGCGAAAGTGCGAAATTTCTACAAGTTTCGAATTGAGTTAGGGTTTGGCAACATTCAGTCTTCTAAGAATTCACCCTCTGATCTCCATTGGACCTCAAGTTTATCCAGAAGTCCTTTCTCAGGTACGCCTCTTCACCAATTCGTTCTTTCGGTTCTTCAAGAATTACAGGGTATAAATGCATTCGTTGGAGAGGAATATGAGTTAAATCGTATGTGGGAGTTAGGTTCAGTTAGGTGTGTTGTCACTTGTTATAGGTTCAATCTATTCTTAATTTTGTATTTTAGTTATCATACTCCAGCTGAAGCGTTTGTTTGTTTTTGCTGTTTAGTAATTTATACTTGAGCGTAATCATTCGAGATGCATACATTTGTACTGCATTGATTGATTACAAAGTATGGTTATGGTAGTTATTATAAGGGTACATAAGTGTTTGGTGTGTAAAGTATGGCGAAAGAACAGGAGTTTTGTATCAATAGACTCATCGGGAGCTATTCAATTTCCAAATAGACATTATAAAGATGTGATATATTCGTATTATCTCATCGAGATGGCACTTTATGTTGGGGAAGACATTCTAATCGGACGCATAATCAATAGTTGAAAGATCACACGCTTTCAACTTCTCTTATTTTTTGGGACCTGTTACATTGAGAATGTAACATTACACGTGGGCGTCGCGGGGAGTGGAACTTTGTAGGGAGAAAATTGCTAAAGCTGCTCTTAGTTTAAGATTAACATTGCAACTCAAACTCATGTTTGAGGTGCAGTGGGATGACATTGAAAGTTTAGGGCGAAAATTGATACAACTTGAATGTTTAGGGGTAAATTTGATTTTCTCCCCCTAATAATACTCATTTTTTATTAGGAAGATTGTAAATATTTATGTGTTATCTTTTTTACTTTGGGAAGATGATGTCTTTGGTCACAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGGTTCTCTCTCTTTCACCCACTATCGTCTATATGAAGTCTTAAGTCATGTATAGACTCTTCAAATTTTCGAGCTTTATTTTGTATACTGATTTTCTTTTTTTTTCTTTTTGGGTTGTTGTCTTCTTGAAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGTTATTAACTAATAGATTTCATGCTTTATCATTTACTCTAAACAAGATTAGTCATTCTTCAATAATTTAAAAATTAGTTAGGTGGTTAGCGAAACAGCAAAATCTAGAACCTTTGATATCTTGTTACTACACAGTTATATACAACTAACAAGAATTTAGTGTGTAAACATGAGCATCATCAGAGTTAGTAATGAGGATTCTTTATGGGGATAGAAGTGAAGGAAGAAGGTATTGAATTCTAAAACAAGGATAAAGGCACAAGGAACCGTGTAACATGAAAATCTCATGTACTCAAAGGTTGTGGCAAGCAAATTTTCTTTTGATTGCAGGTGATGATGTTGGGGCAGTGGCCACCTCTTCTCCACTTTTGCTATTTATAGAAGTCCTCACAAAGCTATCCTAAGTCTTAAGAGCCCAGTTAAAGAAGGGGGGTAGTCTTTGTGTTGGGTGGTCGTAGATTCCAATCAGGGACCCTCACTGTATCTATCTGCTAGGAATGGAAAGACTACTAGCAGGGGCTGCCCGGGGTGGGAAATCCCTGATTTGACTAGGATATGATGGAGCACTGAGTTTTTTTTGGAAATTCTCGAACCTGGCAGTTTCTTTAGGGAAAAAAGAAGTGTACATAAATCTATCTGTTAATATTTATCTATGTCTATATCTATCTATAGATATATTGCTGGTCATGAAATAATTAAATTTGAAAAGCTACTAGATAATTTTAATGGCAGAAAAATATTTTCCCCACGTGGGAATTCCATGAACCCTCCTCCATTTCTCAAAATGGGAAAAAGGGTGGGAATGAAACTTAAGATTTTCTAGAGAGTTGGTAAGAGGAGAGCATCTTCTACTTGCTCGAGTGTAGTATTTTGATTCCTACTATCTCCTAGTTGGCTTGTCTTATGGTGGAGCAGGGAAGAAGCAGCTGATTTTTGTTGGCTTTGTTTCCTTTTTCAATTTAGAAGTGTTGAAGAATTTGTTTAGCATATTTTCTTTGCTTTTGGAGGGCGAAATATTTTATTGATAAACTTTTCACCCTTCCTTAGGGAAGAGCTAAATACAATTAGGGCATCATAGGAATTATGACTCGAAAGAATATATGAACTTTCCTAGAGAGTAGCATTAGATGAATGTTATAAAACTTATTATTACTAAGCTTATTATTATTTTTTATTTTTGAATTTGGAACTTTGTATCCATAGCATTAGTCTCTTTTCATTATATCAATGAAAAGTTTGTTTCTGTTTCAAAAAAAAAAAAAGGATGTTATAAAGGAGAATAGTGTGTTTTGCCTCATCCTTTTGGAGTACATTTCCACACTGTATTTTTCCCCCCAAAAAGCAAGTTGAGAGGACTCTTGTCACTCCAATTTATTACTTGTTCCTCAATTTTTATCATCCCAAGCCCAACAATGAATTTTTTTGTTTTATTGTTGTTCTTTTTAAAAAGGAAAACGCATGGGGGTTCTTGTTTCTTCTTATGATGCATATAACTAGGTCATTGTAGTGCAGTGCTCTCTTGTTTTGTTGTTATCCGCCGATGTCTACACTTGGAAACTGACTATTTGACCTCTCATGCAAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGTTTAGATTGGAAAAGGTCTGGAAACTACAGGAGCTTAGAAAAACCCTTTCAAATTGTAATTAATTTCAAAAAGAGTATAATTACGAAAAGAATTATGTAGGAAACACTAGGAAGAAGAAGAACAATTGCACTCAGCCATCTCAACAATTCATTCATTTTTCAAATAACTTTTTTATTAATTTCTCTCCGATCAAGTTCCCTAAGCCGAAATGTCACTGCAATTATAGGTAGTGTTTTCGCCTTCTCTAAACCCTGACCACATAACTGCTTAGAATACTGTGTTTTGCTGGATTGTTTGATAGTCCAAGAGACTTGCATCAGTCGCTTGCTCACAATGTGTTATCACAAGCCAGCAAATAGGTCAATGATGCCAACATTTGATTAGATTCGAACGTGCTTGATGTGCGAGTTTCAACTATTGTCTTCATAAGCTGGCATCATGACAGCAAATATTTTGACATGGTCGTCTTCAAAAGTTTCACATACATAACTTTTTCGCAAAGGTAAAGAAAAGTTGCACATTTTGATGTATCATGGGCCTTGAGGTACATGGTCCCAAAAAAGATGATTCGGGTGGGGGAATTGAACTTCTAGCCTCTTTGTTGAGCGTATATGCGCTAACAAGTTGAGCTATGTTCAAGTTAACAAATAGATGTTTTTATTTAGAATAAAAATTATGTTTTCAATTCCATGAAAACGGGAATGCAGCAAGCATGAAGACTCGAAGTCAGGTGGATAGAGAGTGCACGCGGTCACTGTGGCACAATGACATTTTTCTTTTTGAGTTCACAATGAATGAGGGTGTAGGGAGATTCAAACTTTTGATTTCTTAGTCGATACATAGCTCGATTTATATAATTTGTTCACTCTGTGCGTACCAAATAATAACTGACATGTACCTAACTGAGTAATACTAATATTATCGATCTTCAGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA

mRNA sequence

ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGCTAATCGAATTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGTTTATCCAGAAGTCCTTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA

Coding sequence (CDS)

ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGCTAATCGAATTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGTTTATCCAGAAGTCCTTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA

Protein sequence

MEGVISRLKLKFQWNEPTLTKQIYPTLRPPFVNFANRILRVCICTAASVLQNQEQGTRLKTRHARFIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFREFWPENV

Homology

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BLAST of Clc11G14000 vs. NCBI nr
Match: XP_016900186.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 8.0e-55
Identity = 117/129 (90.70%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 76  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKR 135
           GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKR
Sbjct: 8   GGIMDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKR 67

Query: 136 GLGADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAF 195
           GLGADKVKKK+KET D  ASD+KNNQERPPPKK +GLSKR RKM+EEERLFQEKEFERAF
Sbjct: 68  GLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEKEFERAF 127

Query: 196 FREFWPENV 205
           FREFWPENV
Sbjct: 128 FREFWPENV 136

[Close]

BLAST of Clc11G14000 vs. NCBI nr
Match: XP_008445906.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 6.8e-54
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKK+KET D  ASD+KNNQERPPPKK +GLSKR RKM+EEERLFQEKEFERAFFRE
Sbjct: 61  ADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEKEFERAFFRE 120

Query: 199 FWPENV 205
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Clc11G14000 vs. NCBI nr
Match: XP_004147099.1 (G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus] >KGN51573.1 hypothetical protein Csa_008303 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 2.6e-53
Identity = 113/126 (89.68%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKK+KETTD   SD+KNNQERPPPKKA+GL+KR RKM+EEERLFQEKEFE+AFFRE
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120

Query: 199 FWPENV 205
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Clc11G14000 vs. NCBI nr
Match: XP_038891672.1 (protein PXR1 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 8.3e-52
Identity = 115/131 (87.79%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 74  STGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNN 133
           +TGGRMDLE GSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQAS+KNN
Sbjct: 45  ATGGRMDLEYGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASIKNN 104

Query: 134 KRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFER 193
           KRGLGADKVKKKLKETTD  ASD+KNNQ      KA+GLSKR RKM+EEERLFQEKEFER
Sbjct: 105 KRGLGADKVKKKLKETTDIAASDRKNNQ------KAKGLSKRMRKMQEEERLFQEKEFER 164

Query: 194 AFFREFWPENV 205
           AFFREFWPENV
Sbjct: 165 AFFREFWPENV 169

[Close]

BLAST of Clc11G14000 vs. NCBI nr
Match: KAG6573761.1 (hypothetical protein SDJN03_27648, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 75  TGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNK 134
           TGGRMDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNK
Sbjct: 83  TGGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNK 142

Query: 135 RGLGADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERA 194
           RGLGADKVKKKL+ETTD  ASD K NQERPP KKA+ +SK+ RKM EEERLF+EKEFERA
Sbjct: 143 RGLGADKVKKKLEETTDIAASDTK-NQERPPSKKAKAMSKKMRKMLEEERLFREKEFERA 202

Query: 195 FFREFWPENV 205
           FFREFWP+NV
Sbjct: 203 FFREFWPDNV 211

[Close]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot
Match: Q6C233 (Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SQS1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 49  VLQNQEQGTR---LKTRHARFIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLK 108
           V++N +  T     +T+H +  ++S +     R+    G      A AID SNIG  LL+
Sbjct: 724 VIRNAKYSTEQYLYETKHQKGSKRSAV-----RVHNREGEIVGHEAPAIDDSNIGRLLLQ 783

Query: 109 KHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 140
           K GW  G GLG   +G  EP+ A VK +KRG+GA
Sbjct: 784 KMGWTTGEGLGAQSRGISEPIIAKVKISKRGIGA 812

[Close]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot
Match: Q9UKJ3 (G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 9.3e-06
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 94  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 139
           I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Sbjct: 38  IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

[Close]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot
Match: A2A6A1 (G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.3e-06
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 94  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 139
           I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Sbjct: 38  IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

[Close]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot
Match: A0JMV4 (RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 94  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 140
           ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Sbjct: 759 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGA 804

[Close]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot
Match: Q6DDU9 (RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 94  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 140
           ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Sbjct: 675 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGA 720

[Close]

BLAST of Clc11G14000 vs. ExPASy TrEMBL
Match: A0A1S4DW19 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.9e-55
Identity = 117/129 (90.70%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 76  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKR 135
           GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKR
Sbjct: 8   GGIMDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKR 67

Query: 136 GLGADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAF 195
           GLGADKVKKK+KET D  ASD+KNNQERPPPKK +GLSKR RKM+EEERLFQEKEFERAF
Sbjct: 68  GLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEKEFERAF 127

Query: 196 FREFWPENV 205
           FREFWPENV
Sbjct: 128 FREFWPENV 136

[Close]

BLAST of Clc11G14000 vs. ExPASy TrEMBL
Match: A0A1S3BEH2 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.3e-54
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKK+KET D  ASD+KNNQERPPPKK +GLSKR RKM+EEERLFQEKEFERAFFRE
Sbjct: 61  ADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEKEFERAFFRE 120

Query: 199 FWPENV 205
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Clc11G14000 vs. ExPASy TrEMBL
Match: A0A0A0KPR8 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G579590 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53
Identity = 113/126 (89.68%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKK+KETTD   SD+KNNQERPPPKKA+GL+KR RKM+EEERLFQEKEFE+AFFRE
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120

Query: 199 FWPENV 205
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Clc11G14000 vs. ExPASy TrEMBL
Match: A0A6J1G054 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449480 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.1e-49
Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLG
Sbjct: 1   MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKKLKETTD  ASD K NQERPP KKA+ +SK+ RKM EEERLF+EKEFERAFFRE
Sbjct: 61  ADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKKMRKMLEEERLFREKEFERAFFRE 120

Query: 199 FWPENV 205
           FWP+NV
Sbjct: 121 FWPDNV 125

[Close]

BLAST of Clc11G14000 vs. ExPASy TrEMBL
Match: A0A6J1HTU1 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466528 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 108/126 (85.71%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 79  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 138
           MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLG
Sbjct: 1   MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLG 60

Query: 139 ADKVKKKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFRE 198
           ADKVKKKLKE+TD  ASD K NQERP  KKA+ +SK+TRKM EEERLF+EKEFERAFFRE
Sbjct: 61  ADKVKKKLKESTDIAASDTK-NQERPSSKKAKAMSKKTRKMLEEERLFREKEFERAFFRE 120

Query: 199 FWPENV 205
           FWP+NV
Sbjct: 121 FWPDNV 125

[Close]

BLAST of Clc11G14000 vs. TAIR 10
Match: AT5G08535.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-28
Identity = 71/120 (59.17%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 85  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKK 144
           SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K
Sbjct: 5   SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAK 64

Query: 145 KLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFREFWPENV 204
             ++    +A D++ +      K+++ LSK+ RKM E E+  QEKEFERAFFREFWP+NV
Sbjct: 65  --RKVAQPQAKDEEVS------KQSKKLSKKMRKMMEHEKHLQEKEFERAFFREFWPDNV 116

[Close]

BLAST of Clc11G14000 vs. TAIR 10
Match: AT5G08535.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-28
Identity = 71/120 (59.17%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 85  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKK 144
           SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K
Sbjct: 30  SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAK 89

Query: 145 KLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFREFWPENV 204
             ++    +A D++ +      K+++ LSK+ RKM E E+  QEKEFERAFFREFWP+NV
Sbjct: 90  --RKVAQPQAKDEEVS------KQSKKLSKKMRKMMEHEKHLQEKEFERAFFREFWPDNV 141

[Close]

BLAST of Clc11G14000 vs. TAIR 10
Match: AT3G52350.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.8e-24
Identity = 66/121 (54.55%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 85  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VK 144
           S  S  + AI SSNIGFQLLKKHGW+EGTGLG+ EQG L P+QA  K+NK+GLGA+K  K
Sbjct: 68  SESSNPSTAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQAEPKHNKQGLGAEKPAK 127

Query: 145 KKLKETTDTKASDKKNNQERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFREFWPEN 204
           +K  +  DT   +          KK++ LSK+  KM E E+   E EFERAF REFWP+N
Sbjct: 128 RKPAQPQDTAFEEVS--------KKSKKLSKKLVKMIEHEKRLAENEFERAFRREFWPDN 180

[Close]

BLAST of Clc11G14000 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 93  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK 144
           AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Sbjct: 925 AIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKK 975

[Close]

BLAST of Clc11G14000 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 93  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK 144
           AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Sbjct: 926 AIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKK 976

The following BLAST results are available for this feature:

BLAST of Clc11G14000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900186.1	8.0e-55	90.70	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isofor...	[more]
XP_008445906.1	6.8e-54	91.27	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isofor...	[more]
XP_004147099.1	2.6e-53	89.68	G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]...	[more]
XP_038891672.1	8.3e-52	87.79	protein PXR1 [Benincasa hispida]	[more]
KAG6573761.1	1.2e-50	86.15	hypothetical protein SDJN03_27648, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc11G14000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6C233	1.1e-06	38.30	Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SQS1 ...	[more]
Q9UKJ3	9.3e-06	51.11	G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2	[more]
A2A6A1	9.3e-06	51.11	G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=...	[more]
A0JMV4	1.2e-05	52.17	RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1	[more]
Q6DDU9	1.2e-05	52.17	RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1	[more]

BLAST of Clc11G14000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DW19	3.9e-55	90.70	G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 OS=Cuc...	[more]
A0A1S3BEH2	3.3e-54	91.27	G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 OS=Cuc...	[more]
A0A0A0KPR8	1.2e-53	89.68	G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G579590 PE=...	[more]
A0A6J1G054	4.1e-49	86.51	G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita mosc...	[more]
A0A6J1HTU1	2.1e-48	85.71	G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita maxi...	[more]

BLAST of Clc11G14000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08535.2	2.3e-28	59.17	D111/G-patch domain-containing protein	[more]
AT5G08535.1	2.3e-28	59.17	D111/G-patch domain-containing protein	[more]
AT3G52350.1	7.8e-24	54.55	D111/G-patch domain-containing protein	[more]
AT3G54230.1	1.5e-06	47.06	suppressor of abi3-5	[more]
AT3G54230.2	1.5e-06	47.06	suppressor of abi3-5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 94..140 e-value: 8.2E-18 score: 75.2
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 97..139 e-value: 2.4E-17 score: 62.5
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 96..142 score: 16.835974
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..184
IPR039146	G patch domain and ankyrin repeat-containing protein 1	PANTHER	PTHR20923	BAT4 PROTEIN-RELATED	coord: 86..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G14000.1	Clc11G14000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding