Clc11G08230 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G08230
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ABC transporter-like protein
Location	ClcChr11: 8027716 .. 8033210 (+)
RNA-Seq Expression	Clc11G08230
Synteny	Clc11G08230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACGTCATTAAGCTTCAGTCCATTAGCCTGGTTCGTCGTCTCCGCTGAACAGATGCCATGGCGAGCTTTGTTTCTGTTTCTAAGTTGTTCATTGGCCTGAACCCAACCCCACAATCAAATCTAGCTGCACCCCACTCCTTCAGGTATTCAAATAACCCCAGCTTTCCTTTCATTTCCTTTCTCTTATTTTGTGAATCCAAACCTTTGTTTCATTCCCATCACTTTTATTTTGGCGTTTGTAGTTCCAATTCCAGAAGAACCAATGCTCTCACTGTGAAATCCGATTACTCTTGCTTCGAAGTGAGTTACAATCTCTCAACTCGATTTATTACCATTTAGCGTCTATATATCTCGTTGTTCTTTAAATTTAGTTTGATGTTCCTTGCATAGGGTTTTCTTCTTCCTTGTTGCCCTAATTGAGATTGACCCAGTTCGTTTCGTTACAATTTCTGCAATTTGGGGGATTGTGGTTGTTATTGGTAAACTTGATTCGACTATTGAGTCTATTTTTTATTCTTAAGGTCAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGCTAATTTTTCCCTTCGAGAGAAAAGGTTCAATTTGCTGCTCTGCTGCCTCAATGTATATTTGTGTAATATATCGTGACGAGGGGTTCGCACTTCTGCTTGTTAATAGCTTGGTTTTTAGTGACTTGCTTGACTAAAACTAATAAAAAATATTTCTCAAATTTACCATGATGTTTGACTGTATGACTAAAACTTCTTTTGGAAATTCGATGAACACTAAATCAGCACTCTACTTAAAAGTTATCTCATAACCTCTGATGACGAGCACGTATAGGAAAATGGTTTTAAAAGTTGATGATTGAATTCTTTCTGAAGCCTAAAATTTTCTTGAGTTCTAATAACTATATAAAGCAGTTCAGCCTGGCTATCCTGAATCAACTATTCAAGGCAGTACTTGTGAAAGACTTGTCTGTTCTCCCTTATAGTAATAAAGGATGTTTCATCACATATTTCTAATTTGGACTTCTTCCCTAAGATTGCTTTCTCAGTCTAATTAATGCACACATATGCCTCATTATCCTTCCCACATTACTTTCCTGTCTGTTGATTTATGCAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTGTTGCAGGTTAAGCTATTTTCTTTGAATTTTAAATGTATTAGGCTTTCCCTTACTTATCTCATGGTCTTTTTTATGTACTTGTTTGTTGATTTATTGTTTATAAGTAAGTTAATCTTTCTTCCTGTTCTCATTTAGCTTCTTGCAGGTTTGAGCAAACCAACTTCAGGTTCCATTTATGTTCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCCCAGCCATTAACCCCAGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTAGCGTACATTTTGGTTAGCATGATAGGACTAATATTTTGAAACTAGTTTAGAAAACAGTTTAAATATGATTATAAGAAGCATTGCAACCACTAGGCTGCTTTAACCTCATAGAGTTGTGTGGTCTTTCTTTTCATACATGTCACCTCATTTGCCTGCTATATATCTTCATTTCTTTGGACGGGAAACACTTGTATTAATGAGCAAAGTATGTAAGAAGGACTATATTTCCAACCGATAGATGGGGACTAAGGAGCTTATTGAAAAATTCTTCAATTGGTGAGAAGAAACTAGAGGGAAAAAAATACAGCACTTGTTTAGGAGGAAGTCATCTAGACACATTAACCCAATCCTTGTTCTGCTCCTTACATTTCTCTCAATAAACCTTTCTTTTCTGTTCCCTTACTAATTTTTCAAGAAAAGCAAACACTGCTAAAATGGAATTGGACTGAAGGATTCTTATTTTAGGATTAAATACTGGACTTATAGTAAATAATAGAGATGGATGTAATCCTATTTCAAGCATAAAGCTCCTATAACTTCGAATTTTCTTTGGAACTTCTCCCATAAGTTTCTTTCAAGCTTGCATATGCAAGTGATCATTTCTTCTGAAGCCTTCTCACACAAAATACCTTAAGTGGATTAAAAGTCATATTTGGGTTGGTTTTGGTTTTGTTAACCTTCTTAAGACCTGGTGGCCAGATGAACAGTAGGGTCATATATGATTTTTGGTTTTGCAAATCAGCTGATGTTTTTCCCCTGATAAGTATACAATCTTTCTTGAGCAAAGAACTAAAGAAGAATTTTCCTAGAAGGCAAGCATATTGTGGAGGTTCATGAATCAAGGATTTATCAATCAACTTCATAATTCTTTAATCTTTAATTTGCTAAGGATGAACGTGTACTTAATGGGCAACAAAATTAGCATCATCTCCATTGACAGTCCTGTGTGTTAGAATAATACTTCTTAATTTCTTCAATATTTTATATATACACCAACTGACTATTGAAATTGTCAGATTCTGAAATTTTTTAGTTTGTGCTTATGTTGTGATGAAACCCAAATAACTACAATAAAACTAGAAGGTGAAAGGATAAAGGAATACAATAACTCTCCAAGTATTTGAGATACTTAGAAATTAGAACTTCTCTCTCAAGCGAGAATACTCTGCCTAAACCCACTTAACAGTTGCCTATTTTCATCTCCTCTTACTTCCTCTATTTTATTCAACTCCTTGACCAATGACTAATATAGTCTTAATTCATAACTACTTCAATGCTATTCCTACGGGCTTGTTGCCAGTATCTTCAATTTTCCATATGATTGAAAGGCACTATTCTGCCCTCATTTTCAAACTTCTACATTTTTTATTGCTTGTACTATGATACTTGATAAGTAGCTGAAAATATTCTTTTGCTGAAGGTAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACAGAAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGCGTTGAGACTCCAAAGAGCAATTAATTGGGTATTTTTTTATCTTTCCTCACCAACAGTTGTTTACATGTTTTTGTTGCTTTGTTTTAATTATTATTACCACGATGGATTTCTTTATTCCTTTCTGTCGATGACTGTAGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTAAGCCTAAATAACAAAATTAACTCATGCGAGCACCTTCAATTTGTTAAGAAAAGGTAGACATACTTGAATGAACTTGGGGCATTTATCGATCGGGAAATGGAATAGAACTTGGAGTACTAACATTAACTGCCTTTGTGCCTTTTATTTTTGGTCTAACCTAGCAACATTTTAAAGTGAGATAAATGGAATAATTAATTATTGATGAAAAATACTGTCCACTGCACAATATTAGGGGTAGTTGGGGTGCTACTATGACGTGGAGAAAAAAATAATGCTATTCCTCTTTCATCTGATTCTAATTCCAAAATATTTAGTTAAAACATAATTCATTTTTTTATTTGTACCTTTCAAAATGCTTGTGTACTTGCATTCTTATACATTGAATAAGTCACATTTTTTGCAGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGGTATGAAGATCAATTTTGCGATCCATAATCATAATAATATTGTCTACAAACTAAAGAAGTTGAATAAATCACAAACTCGGGGATTTAATGAAATTGGAAATTCAATTAAGGAAATTGTGGATCATTTAATTCACGTATTTCTGTTGACTTGATGGAACTTTTATCTTTGAAACTGCAGAAATTTAAGGTCCTGACCTTAGTGTGTCATTGATTAAATCAGAAGGCTAGAATGAATAGCTTCCACTTCCAGTTGTTTTTAGTTATTCTAAACTTGGGTTCTCATTTGTCCTTGACTTTACATTATTTTAACTATAATATCGCAGAACAAATGGTTTTTTGGAAGAATTTTTCTATTGTTTTTATAAGGACTGGTTCATATTGCTTGGTATCTTAGTATATGGTGCTTTTTGAAACGTAGGATGTAATTTGGGCCTATGCTTTTGTTTTATGCCCTTTCATTCTTATATGATAGATTGGAAGGCTCGTACTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAAGTTAGTCTGCTTTTTCACTCCTTCCAGCTTTGTTTGAGCTATTAGTTCTATCAGTTGGATTTCTTGTCGCAAAAGGAAAAATCAATTCTTTAATTACAGGATCAGTTTAAGGATTTGGTAGAGAGAAAAAACATGATAATTTCATCCTCTGATGATATACTGATGTTGGTTTGGAATCATGTATTTAAAATTCTATAAATGGATAGAGCTCTTAATTGAACTTGGCCATAGATTTGTCATCTTTCTGTTATTTATAGTAATGAAAAGCTGATAAGCCGTTTTTTTGTTAAATTTTTATGATAATGATGTTGATGAAGCTTAAAAAAATGATCTAGAAATTATTCCAAATGGTTGCGAGTAATTCTGAAATTTGAAATTTGTCAAGAATCGAGTTTATTGCACCGAACCTAATGCAACTACAGTCCATTGCTTCTACCAAACCAACATCTGGTAAAAGACAATTAATACCGTCATTCTTTTGCTTTTTAGTTTAATCCATTCTGATTTCATTTGATAGAGGTTTTCATGCTCAGTGTTCACTCCTGTAATTCTGTGTGCCTTTTAGAGAGTTCGCTGGCTTAGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAACCTCTGCCGATTTAATTTGCAACTTCTAACCATGCGTTAATGCTGTGAGTATTATTTCCTGCTTGCTACTCCTACTTTGTTCTTTCATCTTTATGCTTCCATTTTTGTTCAACAAAACATGACACAATCTGTAAAACCGAAGTTGTGTTGGTATGAATTCTTCTCGTTTTGATGAAATCTTTTGTTTGCCTTAAATTTTCAGCATGGCATCCAGTATACATCAACTCAAGGACCAAAACTGGTTGGAGACTCACAAGCTTATGGTAACCAACCCATTTTTGAATTTTTTAATCTGTGTAAATTATTCAATAATAGTATAAAAAAAATTTTAAAAAAATTTGCAGAAACAATTTTGGACTTCAGACCCTTTCCAAATCTTCAAATAACTAAACATTGTCATTATGTTTCTGTAACCTCTTCAAACGAGTTGTAATTAGAGAAGCTCGAGTTTGTTGATCTTGATTTCGTTCGAGATCGGCATTCGTTATTATAACCCTTAACATCTCAGACACAAATTAAAAGGTGTTTAGCTGTTTTCTCAGTTAGTGGCAACAGTTTTGGAAGCTTTGGGATTTTGGCTTGACATGTTTTCTGGAAATCGTTTGCAGATGATGGAACTTGAAGGCGTCATCCCACTAAATAAATTGGCTTATTTTAGAATGATTTAG

mRNA sequence

GAAAACGTCATTAAGCTTCAGTCCATTAGCCTGGTTCGTCGTCTCCGCTGAACAGATGCCATGGCGAGCTTTGTTTCTGTTTCTAAGTTGTTCATTGGCCTGAACCCAACCCCACAATCAAATCTAGCTGCACCCCACTCCTTCAGTTCCAATTCCAGAAGAACCAATGCTCTCACTGTGAAATCCGATTACTCTTGCTTCGAAGTCAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGCTAATTTTTCCCTTCGAGAGAAAAGGTTCAATTTGCTGCTCTGCTGCCTCAATTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTGTTGCAGGTTTGAGCAAACCAACTTCAGGTTCCATTTATGTTCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCCCAGCCATTAACCCCAGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACAGAAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGCGTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGGTATGAAGATCAATTTTGCGATCCATAATCATAATAATATTGTCTACAAACTAAAGAAGTTGAATAAATCACAAACTCGGGGATTTAATGAAATTGGAAATTCAATTAAGGAAATTGTGGATCATTTAATTCACGCTCGTACTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAACATGGCATCCAGTATACATCAACTCAAGGACCAAAACTGGTTGGAGACTCACAAGCTTATGTTAGTGGCAACAGTTTTGGAAGCTTTGGGATTTTGGCTTGACATGTTTTCTGGAAATCGTTTGCAGATGATGGAACTTGAAGGCGTCATCCCACTAAATAAATTGGCTTATTTTAGAATGATTTAG

Coding sequence (CDS)

ATGGCGAGCTTTGTTTCTGTTTCTAAGTTGTTCATTGGCCTGAACCCAACCCCACAATCAAATCTAGCTGCACCCCACTCCTTCAGTTCCAATTCCAGAAGAACCAATGCTCTCACTGTGAAATCCGATTACTCTTGCTTCGAAGTCAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGCTAATTTTTCCCTTCGAGAGAAAAGGTTCAATTTGCTGCTCTGCTGCCTCAATTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTGTTGCAGGTTTGAGCAAACCAACTTCAGGTTCCATTTATGTTCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCCCAGCCATTAACCCCAGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACAGAAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGCGTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGGTATGAAGATCAATTTTGCGATCCATAATCATAATAATATTGTCTACAAACTAAAGAAGTTGAATAAATCACAAACTCGGGGATTTAATGAAATTGGAAATTCAATTAAGGAAATTGTGGATCATTTAATTCACGCTCGTACTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAACATGGCATCCAGTATACATCAACTCAAGGACCAAAACTGGTTGGAGACTCACAAGCTTATGTTAGTGGCAACAGTTTTGGAAGCTTTGGGATTTTGGCTTGACATGTTTTCTGGAAATCGTTTGCAGATGATGGAACTTGAAGGCGTCATCCCACTAAATAAATTGGCTTATTTTAGAATGATTTAG

Protein sequence

MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTEHSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNIVYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMASSIHQLKDQNWLETHKLMLVATVLEALGFWLDMFSGNRLQMMELEGVIPLNKLAYFRMI

Homology

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BLAST of Clc11G08230 vs. NCBI nr
Match: XP_038886122.1 (ABC transporter I family member 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 2.6e-109
Identity = 221/310 (71.29%), Postives = 232/310 (74.84%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVSVSKLFIG N TPQSNLAAPHSFSSN RRTNALTVKSDYSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSVSKLFIGRNSTPQSNLAAPHSFSSNLRRTNALTVKSDYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGL+KPTSGSIYVQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLNKPTSGSIYVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWP+K+SDFRLKENL+LRLQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRKKSDFRLKENLSLRLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDP+SLSGGYKRRLALAIQLV+IPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPYSLSGGYKRRLALAIQLVEIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKKDLTVLVVSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKDLTVLVVSHDLKEFA 259

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDYSW 259

[Close]

BLAST of Clc11G08230 vs. NCBI nr
Match: XP_004138625.1 (ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis sativus] >KGN63155.1 hypothetical protein Csa_021846 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-103
Identity = 213/310 (68.71%), Postives = 225/310 (72.58%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVSVS  FI  NP PQS L APHSFSSNSRRTNALT+KS+YSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSVSNFFITRNPIPQSYLPAPHSFSSNSRRTNALTLKSNYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGLSKPTSGSI VQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSICVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWP++RSD  LKENLALRLQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALRLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKK+LTVL+VSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKELTVLIVSHDLKEFA 259

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDNSW 259

[Close]

BLAST of Clc11G08230 vs. NCBI nr
Match: XP_008441309.1 (PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >XP_008441310.1 PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >TYK02723.1 ABC transporter I family member 11 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-100
Identity = 209/310 (67.42%), Postives = 221/310 (71.29%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVS S  F   NP P S L A HSFSSNSRRTNAL +KSDYSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSFSNFFATRNPIPLSYLPASHSFSSNSRRTNAL-LKSDYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGLSKPTSGSI VQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQ------LLAGLSKPTSGSICVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWP++RSDF LKENLA++LQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMKLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKKDLTVL+VSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKDLTVLIVSHDLKEFA 258

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDNSW 258

[Close]

BLAST of Clc11G08230 vs. NCBI nr
Match: XP_022992841.1 (ABC transporter I family member 11, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-96
Identity = 198/303 (65.35%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSF-SSNSRRTNALTVKSDYSCFEVRDLSYRPPGT 60
           MASFVSVSKLF+G  PTP SNL A  SF SSNS RTNAL+VKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKD 120
           EHSLL+  NFSLREK F L+            +       +AGLSKPTSGS+YVQKY KD
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSVYVQKYGKD 120

Query: 121 GKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAI 180
            KPCQSSQPLT +RVGIVFQFPERYF+ D+VLDEVTFGWP+++SD  LK++LALRLQRAI
Sbjct: 121 DKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAI 180

Query: 181 NWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNN 240
           NWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGL  K          
Sbjct: 181 NWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK---------- 240

Query: 241 IVYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMA 300
                                           AR DVVKLLKNLKKDLTVLVVSHDL + 
Sbjct: 241 --------------------------------ARADVVKLLKNLKKDLTVLVVSHDLKLV 255

Query: 301 SSI 303
           S++
Sbjct: 301 SAL 255

[Close]

BLAST of Clc11G08230 vs. NCBI nr
Match: XP_022992839.1 (ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima] >XP_022992840.1 ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 9.6e-96
Identity = 200/311 (64.31%), Postives = 218/311 (70.10%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSF-SSNSRRTNALTVKSDYSCFEVRDLSYRPPGT 60
           MASFVSVSKLF+G  PTP SNL A  SF SSNS RTNAL+VKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKD 120
           EHSLL+  NFSLREK F L+            +       +AGLSKPTSGS+YVQKY KD
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSVYVQKYGKD 120

Query: 121 GKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAI 180
            KPCQSSQPLT +RVGIVFQFPERYF+ D+VLDEVTFGWP+++SD  LK++LALRLQRAI
Sbjct: 121 DKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAI 180

Query: 181 NWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNN 240
           NWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGL  K          
Sbjct: 181 NWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK---------- 240

Query: 241 IVYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMA 300
                                           AR DVVKLLKNLKKDLTVLVVSHDL   
Sbjct: 241 --------------------------------ARADVVKLLKNLKKDLTVLVVSHDLKEF 260

Query: 301 SSIHQLKDQNW 311
           +    L D +W
Sbjct: 301 AG---LVDYSW 260

[Close]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot
Match: Q8LEF6 (ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI11 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.2e-66
Identity = 151/307 (49.19%), Postives = 179/307 (58.31%), Query Frame = 0


Query: 15  NPTPQSNLA-APHSFSSNS---------RRTNALTVKS-DYSCFEVRDLSYRPPGTEHSL 74
           +PTP   +A  P SFSS +         RRT    V S DYSC EVRD+ YRPPGT+ ++
Sbjct: 8   SPTPVFGIAEPPASFSSTAIGWKQPLRFRRTKKPRVISCDYSCIEVRDVCYRPPGTQLNI 67

Query: 75  LNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDGKPC 134
           LN  NFSLREK F L+            +       +AGL+KPTSGSI +Q Y  DG+P 
Sbjct: 68  LNGVNFSLREKSFGLIFGKSGSGKTTLLQ------LLAGLNKPTSGSICIQGYGDDGQPK 127

Query: 135 QSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAINWVG 194
                L  E+VGIVFQFPER+F+ D+VLDE+TFGWP+++   +LKE L   LQRA NWVG
Sbjct: 128 ADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFNWVG 187

Query: 195 LNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNIVYK 254
           L+ I LDKDP  LSGGYKRRLALAIQLVQ PDLLILDEPLAGL  K              
Sbjct: 188 LDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWK-------------- 247

Query: 255 LKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMASSIH 311
                                       AR DV KLLK+LKK+LT+LVVSHDL     + 
Sbjct: 248 ----------------------------ARADVAKLLKHLKKELTLLVVSHDLR---ELA 263

[Close]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot
Match: A3DJK5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.4e-19
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 102 GLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQK 161
           GL KPTSGS+Y+   +  G+  +  +    ++VGIVFQ+PE     ++V  ++ FG  ++
Sbjct: 55  GLLKPTSGSVYINGEELTGQRAKELK----KQVGIVFQYPEHQLFEETVYKDIAFGLVRR 114

Query: 162 RSDFRLKENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDE 221
             +   K+ +  ++++ I  VGL+   LDK P  LSGG KRR+A+A  LV  P +L+LDE
Sbjct: 115 GEE---KDEIYRKVRKTIRLVGLSEDILDKSPFELSGGQKRRVAMAGILVLEPSILVLDE 174

Query: 222 PLAGLGMKINFAIHNHNNIVYKLKKLNK 250
           P AGL  K    I     +V  L K NK
Sbjct: 175 PAAGLDPKGREEIF---ELVSNLHKNNK 192

[Close]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot
Match: Q97EK9 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18
Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 100 VAGLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWP 159
           + GL KPTSGSI++   D   K  + +     ++VG+VFQ+PE     +++  ++ FG  
Sbjct: 53  INGLLKPTSGSIFIDDVDITDKSVKLND--IRKKVGLVFQYPEYQLFEETIEKDIAFG-- 112

Query: 160 QKRSDFRLKENLALRLQRAINWVGLN-GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLI 219
             R+    +E ++ R+++A+  VGL      DK P  LSGG KRR+A+A  +   P +LI
Sbjct: 113 -PRNMGLSEEEVSTRVKKAMKMVGLEYNDFKDKSPFELSGGQKRRVAIAGVVAMEPKVLI 172

Query: 220 LDEPLAGLGMKINFAIHNHNNIVYKLKKLNKSQTRGFNEIGNSIKEI 266
           LDEP AGL  K        ++I+Y++KKL K        + +S++++
Sbjct: 173 LDEPTAGLDPK------GRDDILYEIKKLQKEYKMTIILVSHSMEDV 208

[Close]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot
Match: Q890R3 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.5e-16
Identity = 56/167 (33.53%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 100 VAGLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWP 159
           + GL KP SG I +   D   K  + S+    ++VG+VFQ+PE     +++  ++ FG P
Sbjct: 53  INGLLKPHSGRIIIDDIDITKKEVKMSE--IRKKVGLVFQYPEYQLFEETIEKDIAFG-P 112

Query: 160 QKRSDFRLKENLALRLQRAINWVGLNGIAL-DKDPHSLSGGYKRRLALAIQLVQIPDLLI 219
           +  +    +E +  R++RA+N VGL+     DK P  LSGG KRR+A+A  +   P++LI
Sbjct: 113 KNLN--LSEEEINKRIKRAMNIVGLDYEKYRDKSPFELSGGQKRRVAIAGVVAMEPEVLI 172

Query: 220 LDEPLAGLGMKINFAIHNHNNIVYKLKKLNKSQTRGFNEIGNSIKEI 266
           LDEP AGL  K        + I+ ++K L+K        + +S++++
Sbjct: 173 LDEPTAGLDPK------GRDEILGEIKDLHKEYNMTIILVSHSMEDV 208

[Close]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot
Match: Q5LXJ4 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus thermophilus (strain CNRZ 1066) OX=299768 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.0e-15
Identity = 53/133 (39.85%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 102 GLSKPTSGSIYV-------QKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEV 161
           GL  PTSG + V       Q  +K+ KP +       ++VG+VFQFPE     ++VL+++
Sbjct: 55  GLYLPTSGQVKVDDTIINSQSKNKEIKPIR-------KKVGLVFQFPESQLFAETVLEDI 114

Query: 162 TFGWPQKRSDFRL-KENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQI 221
            FG PQ   +F + KE    R   ++  VGL+    D++P  LSGG  RR+A+A  L   
Sbjct: 115 AFG-PQ---NFGVSKEEAEQRALESLRLVGLSDELRDQNPFDLSGGQMRRVAIAGILAMQ 174

Query: 222 PDLLILDEPLAGL 227
           PD+L+LDEP AGL
Sbjct: 175 PDILVLDEPTAGL 176

[Close]

BLAST of Clc11G08230 vs. ExPASy TrEMBL
Match: A0A0A0LMK4 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G405060 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 6.1e-104
Identity = 213/310 (68.71%), Postives = 225/310 (72.58%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVSVS  FI  NP PQS L APHSFSSNSRRTNALT+KS+YSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSVSNFFITRNPIPQSYLPAPHSFSSNSRRTNALTLKSNYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGLSKPTSGSI VQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSICVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWP++RSD  LKENLALRLQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALRLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKK+LTVL+VSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKELTVLIVSHDLKEFA 259

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDNSW 259

[Close]

BLAST of Clc11G08230 vs. ExPASy TrEMBL
Match: A0A1S3B2P1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485466 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 209/310 (67.42%), Postives = 221/310 (71.29%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVS S  F   NP P S L A HSFSSNSRRTNAL +KSDYSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSFSNFFATRNPIPLSYLPASHSFSSNSRRTNAL-LKSDYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGLSKPTSGSI VQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQ------LLAGLSKPTSGSICVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWP++RSDF LKENLA++LQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMKLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKKDLTVL+VSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKDLTVLIVSHDLKEFA 258

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDNSW 258

[Close]

BLAST of Clc11G08230 vs. ExPASy TrEMBL
Match: A0A5D3BSR8 (ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00210 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 209/310 (67.42%), Postives = 221/310 (71.29%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSFSSNSRRTNALTVKSDYSCFEVRDLSYRPPGTE 60
           MASFVS S  F   NP P S L A HSFSSNSRRTNAL +KSDYSCFEVRDLSYRPPGTE
Sbjct: 1   MASFVSFSNFFATRNPIPLSYLPASHSFSSNSRRTNAL-LKSDYSCFEVRDLSYRPPGTE 60

Query: 61  HSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDG 120
           HSLLNA NFSLREK F L+            +       +AGLSKPTSGSI VQKYDKDG
Sbjct: 61  HSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQ------LLAGLSKPTSGSICVQKYDKDG 120

Query: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAIN 180
           KPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWP++RSDF LKENLA++LQRAIN
Sbjct: 121 KPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMKLQRAIN 180

Query: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNI 240
           WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGL  K           
Sbjct: 181 WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWK----------- 240

Query: 241 VYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMAS 300
                                          ARTDVVKLLKNLKKDLTVL+VSHDL   +
Sbjct: 241 -------------------------------ARTDVVKLLKNLKKDLTVLIVSHDLKEFA 258

Query: 301 SIHQLKDQNW 311
               L D +W
Sbjct: 301 G---LVDNSW 258

[Close]

BLAST of Clc11G08230 vs. ExPASy TrEMBL
Match: A0A6J1JUM5 (ABC transporter I family member 11, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489049 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 9.4e-97
Identity = 198/303 (65.35%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSF-SSNSRRTNALTVKSDYSCFEVRDLSYRPPGT 60
           MASFVSVSKLF+G  PTP SNL A  SF SSNS RTNAL+VKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKD 120
           EHSLL+  NFSLREK F L+            +       +AGLSKPTSGS+YVQKY KD
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSVYVQKYGKD 120

Query: 121 GKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAI 180
            KPCQSSQPLT +RVGIVFQFPERYF+ D+VLDEVTFGWP+++SD  LK++LALRLQRAI
Sbjct: 121 DKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAI 180

Query: 181 NWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNN 240
           NWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGL  K          
Sbjct: 181 NWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK---------- 240

Query: 241 IVYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMA 300
                                           AR DVVKLLKNLKKDLTVLVVSHDL + 
Sbjct: 241 --------------------------------ARADVVKLLKNLKKDLTVLVVSHDLKLV 255

Query: 301 SSI 303
           S++
Sbjct: 301 SAL 255

[Close]

BLAST of Clc11G08230 vs. ExPASy TrEMBL
Match: A0A6J1JWU1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489049 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.7e-96
Identity = 200/311 (64.31%), Postives = 218/311 (70.10%), Query Frame = 0


Query: 1   MASFVSVSKLFIGLNPTPQSNLAAPHSF-SSNSRRTNALTVKSDYSCFEVRDLSYRPPGT 60
           MASFVSVSKLF+G  PTP SNL A  SF SSNS RTNAL+VKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKD 120
           EHSLL+  NFSLREK F L+            +       +AGLSKPTSGS+YVQKY KD
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQ------LLAGLSKPTSGSVYVQKYGKD 120

Query: 121 GKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAI 180
            KPCQSSQPLT +RVGIVFQFPERYF+ D+VLDEVTFGWP+++SD  LK++LALRLQRAI
Sbjct: 121 DKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAI 180

Query: 181 NWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNN 240
           NWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGL  K          
Sbjct: 181 NWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK---------- 240

Query: 241 IVYKLKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMA 300
                                           AR DVVKLLKNLKKDLTVLVVSHDL   
Sbjct: 241 --------------------------------ARADVVKLLKNLKKDLTVLVVSHDLKEF 260

Query: 301 SSIHQLKDQNW 311
           +    L D +W
Sbjct: 301 AG---LVDYSW 260

[Close]

BLAST of Clc11G08230 vs. TAIR 10
Match: AT5G14100.1 (non-intrinsic ABC protein 14 )

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-67
Identity = 151/307 (49.19%), Postives = 179/307 (58.31%), Query Frame = 0


Query: 15  NPTPQSNLA-APHSFSSNS---------RRTNALTVKS-DYSCFEVRDLSYRPPGTEHSL 74
           +PTP   +A  P SFSS +         RRT    V S DYSC EVRD+ YRPPGT+ ++
Sbjct: 8   SPTPVFGIAEPPASFSSTAIGWKQPLRFRRTKKPRVISCDYSCIEVRDVCYRPPGTQLNI 67

Query: 75  LNAANFSLREKRFNLLLCCLNFWVNFWTEWKWENYFVAGLSKPTSGSIYVQKYDKDGKPC 134
           LN  NFSLREK F L+            +       +AGL+KPTSGSI +Q Y  DG+P 
Sbjct: 68  LNGVNFSLREKSFGLIFGKSGSGKTTLLQ------LLAGLNKPTSGSICIQGYGDDGQPK 127

Query: 135 QSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAINWVG 194
                L  E+VGIVFQFPER+F+ D+VLDE+TFGWP+++   +LKE L   LQRA NWVG
Sbjct: 128 ADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFNWVG 187

Query: 195 LNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNIVYK 254
           L+ I LDKDP  LSGGYKRRLALAIQLVQ PDLLILDEPLAGL  K              
Sbjct: 188 LDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWK-------------- 247

Query: 255 LKKLNKSQTRGFNEIGNSIKEIVDHLIHARTDVVKLLKNLKKDLTVLVVSHDLNMASSIH 311
                                       AR DV KLLK+LKK+LT+LVVSHDL     + 
Sbjct: 248 ----------------------------ARADVAKLLKHLKKELTLLVVSHDLR---ELA 263

[Close]

BLAST of Clc11G08230 vs. TAIR 10
Match: AT3G47740.1 (ABC2 homolog 2 )

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06
Identity = 42/134 (31.34%), Postives = 61/134 (45.52%), Query Frame = 0


Query: 100 VAGLSKPTSGSIYVQKYD--KDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFG 159
           + GL KPTSG+ +VQ  D  KD     +S  + P+                 +L E   G
Sbjct: 661 MTGLVKPTSGAAFVQGLDICKDMDRVYTSMGVCPQH---------------DLLWETLTG 720

Query: 160 WPQKRSDFRLKE----NLALRLQRAINWVGL-NGIALDKDPHSLSGGYKRRLALAIQLVQ 219
                   RLK     +L   ++ ++  V L +G   DK     SGG KRRL++AI L+ 
Sbjct: 721 REHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIG 779

Query: 220 IPDLLILDEPLAGL 227
            P ++ +DEP  GL
Sbjct: 781 NPKVVYMDEPSTGL 779

[Close]

BLAST of Clc11G08230 vs. TAIR 10
Match: AT4G33460.1 (ABC transporter family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06
Identity = 36/122 (29.51%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 100 VAGLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWP 159
           +AG+  P+SG+++V+K               P+    VFQ P+   +  +V  +V FG  
Sbjct: 90  LAGVVNPSSGTVFVEK---------------PK--NFVFQNPDHQVVMPTVEADVAFGL- 149

Query: 160 QKRSDFRLKENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLIL 219
            K  D   +E +  R+ +A+  VG+    + +   +LSGG K+R+A+A  L +   +L+L
Sbjct: 150 GKYHDMN-QEEVKSRVIKALEAVGMRDY-MQRPIQTLSGGQKQRIAIAGALAEACKVLLL 191

Query: 220 DE 222
           DE
Sbjct: 210 DE 191

[Close]

BLAST of Clc11G08230 vs. TAIR 10
Match: AT1G67940.1 (non-intrinsic ABC protein 3 )

HSP 1 Score: 49.3 bits (116), Expect = 7.5e-06
Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 133 RVGIVFQFPERYFITDSVLDEVTFGWPQKRSDFRLKENLALRLQRAINWVGLNGIALDKD 192
           RVG++FQ P       +V D V +G P  R + +L +    +L   ++   L+     K 
Sbjct: 104 RVGMLFQLP--VLFQGTVADNVRYG-PNLRGE-KLSDEEVYKL---LSLADLDASFAKKT 163

Query: 193 PHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLGMKINFAIHNHNNIVYKLKKLNKSQT 252
              LS G  +R+ALA  L   P++L+LDEP + L      +  N  +++ KLKK      
Sbjct: 164 GAELSVGQAQRVALARTLANEPEVLLLDEPTSALD---PISTENIEDVIVKLKK-----Q 223

Query: 253 RGFNE--IGNSIKEI 266
           RG     + +SIK+I
Sbjct: 224 RGITTVIVSHSIKQI 223

[Close]

BLAST of Clc11G08230 vs. TAIR 10
Match: AT5G13580.1 (ABC-2 type transporter family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05
Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 163 SDFRLKENL-----ALRLQRAINWVGL----NGIALDKDPHSLSGGYKRRLALAIQLVQI 222
           ++FRL  +L     +LR+Q  I+ +GL    N +  D+    +SGG +RR+++ I ++  
Sbjct: 191 AEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHD 250

Query: 223 PDLLILDEPLAGL 227
           P LL LDEP +GL
Sbjct: 251 PILLFLDEPTSGL 263

The following BLAST results are available for this feature:

BLAST of Clc11G08230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886122.1	2.6e-109	71.29	ABC transporter I family member 11, chloroplastic [Benincasa hispida]	[more]
XP_004138625.1	1.3e-103	68.71	ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis sativus] >...	[more]
XP_008441309.1	2.2e-100	67.42	PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis...	[more]
XP_022992841.1	1.9e-96	65.35	ABC transporter I family member 11, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_022992839.1	9.6e-96	64.31	ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima] ...	[more]

BLAST of Clc11G08230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEF6	8.2e-66	49.19	ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
A3DJK5	4.4e-19	38.51	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostrid...	[more]
Q97EK9	1.7e-18	34.13	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acet...	[more]
Q890R3	3.5e-16	33.53	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium teta...	[more]
Q5LXJ4	3.0e-15	39.85	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus th...	[more]

BLAST of Clc11G08230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK4	6.1e-104	68.71	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G40...	[more]
A0A1S3B2P1	1.1e-100	67.42	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=...	[more]
A0A5D3BSR8	1.1e-100	67.42	ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1JUM5	9.4e-97	65.35	ABC transporter I family member 11, chloroplastic isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1JWU1	4.7e-96	64.31	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima...	[more]

BLAST of Clc11G08230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14100.1	5.9e-67	49.19	non-intrinsic ABC protein 14	[more]
AT3G47740.1	2.0e-06	31.34	ABC2 homolog 2	[more]
AT4G33460.1	4.4e-06	29.51	ABC transporter family protein	[more]
AT1G67940.1	7.5e-06	31.11	non-intrinsic ABC protein 3	[more]
AT5G13580.1	1.3e-05	36.99	ABC-2 type transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 100..223 e-value: 1.5E-11 score: 44.9
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 47..299 score: 12.418461
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 99..321 e-value: 1.3E-27 score: 98.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 100..233
None	No IPR available	PANTHER	PTHR43553	HEAVY METAL TRANSPORTER	coord: 100..302
None	No IPR available	PANTHER	PTHR43553	HEAVY METAL TRANSPORTER	coord: 22..79
None	No IPR available	PANTHER	PTHR43553:SF1	ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC	coord: 100..302
None	No IPR available	PANTHER	PTHR43553:SF1	ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC	coord: 22..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G08230.2	Clc11G08230.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0055076	transition metal ion homeostasis
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009706	chloroplast inner membrane
molecular_function	GO:0042626	ATPase-coupled transmembrane transporter activity
molecular_function	GO:0005524	ATP binding