Clc11G01220 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G01220
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description40S ribosomal protein S5-like
LocationClcChr11: 1310816 .. 1313670 (-)
RNA-Seq ExpressionClc11G01220
SyntenyClc11G01220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAAGTGTGTTGTGAGAGAAGATTCATTCTTGAAAAAGGAGAGTCAACCTAGGAAAGCACTACCAATCTCGAGGCATTTTGAGTTGTATTTCCAACGTCATTTAATTGATTTATTTCCTTCTAGAACGTTATTTTGTAGCTATGATTTCTGATTGAATGGAGTTCATTTTTTATCATTGGTAATGAGTTAAATCCTCCTGGGGGTTCGACAATGTGGATGCCCTAGGCTTGTTATGGCTTAAGTAATGTTTACAAATATAGCAAAATTTTACTGTGTATTTTGCTATTAGTCGTAAATATTTTCAGCAGTTTTGTCATTTAAGATAATTTTTCATATGTTAACTTGTTTCAAAATCATTAAAGATTTATTTACTAATTTAAATTTAATTTTTTTAATTTTTTTTATAAATTTTTTCAAAACTATCCATCAAAATCTACATTGTAGGACATCAAATTTTTTATTTTTTATTTTTATTTTTATTATTATTATTATTATTTTAAATTAAGACTTCTATTTTAAGTCGACATCAATATTTTAAACTTGGATGATAGTATATATATAATATTTGATTTTAGGGTTTTTTCCTTCCCCGTTTCCCTCCCACTATTTCAGCCGCCTCCTTCCCCATTTTTTTTCTAGGGCTAAATACAAACACATTCCTCCGCTTGCAGCCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGTAACACCCTCCCCTTCATACTTTTGATTCTGTTAAGCCTCTGGTTGTTGCTCTTATTGTTATTGTTTTTCTATGGAGTTCTTCAGTATTATAGGTAAATTTTACTTTTTTTGCGAGTAACTGCGGGTTTTTCGAGTTTTTTTGTTTCTGATATTTGCAGGAATTGGTCGAAGTATATATATATTCTCCGTTCCTTGGATTGAAATACTAGATCTATTATGTTTCTATCACTCTTGTTCATATTAGTTTTACCTCTCCTGCACTGGTATGAATAAAATGGATCTGATCTTTTAAGACCCATCTCTTCTGGGGAAGTTTGAACTCTTGCTGATAACTCCTTTCTCACTCAAGCTGTAAAGAAATGATGTTGGGATTAAGATAAGCCATGGACGAAAGTTCTGGAATATAATGTTATGTTCTAATTATTTCAGTTATATGCATTTGTATCCAATTTACTCCCTGGTTGTGAGTATGCCTACTATTGACCATAGTGTTTTCTCCAGTTTGTAGTGCACTTAACTTGTACAACTTTATATTAGCACACTTAACATGTTGTTTATAGAGAGTATACTGAGCACTTAGGGATGCCCTATTGAGTCATGGGGAGTTTTCGTTTTACAGACAGACAGATACTAAGATTTTTGGCCGAGCTTGACCCCTGTTTTATTCTTTTTTCTTTTTTCTTTATTTTTATAGGAAGCTCTGGCTGTCAAAATTATATTATGTGATCATTGACATATTAATCTATCATTAGGGAATTGAATAATACGAAGTAAAGTCTTATTTATCTAATTTTTTTAGTTTGGATTTATTACTTTTGTTGAAAAGCATGATTGTTAATGAAATCCATAGACATTTGTGGAAATTTGTCTCAGGTGTTTCTCTCTCTGTGCTTTTTCTTCTCACTATATTTTCCATTCGGAATGGGGGTATTTGCTTCTTGGAGAATGTGTGGATTGGTGATAGTCGTCTTTTTCATTTTCATTGCCTTTATAATTTCTCTCTGGAAAAATGTATTTGGCTTCTCTTTGCAACTTTTGTGCTGCAACTGTGTTTTATGACGCCAATTTGAGGAGAAATTTGAACAATAGAGTCCCTGATCCCTCCTATCATCTGGTTTTTTGGGAGGTCTCTCTCTGGCCTAGTGTGGGAGATGGGAGAATGAGGAACCCTTTATTAGAAATGGTCCTATTCTTATGGTGCTTCTCATTTATCACCTTTACAGTTGAACCTTATTAGGTTTTTGAATTCGTGATATTGCCTGCATTTTTTGGGGTGAAAATTGTGGCCTTTTATAAGTTAAGGCTAGAGACAGGATGTTCTGGAGTAACATTTGAGTGTTGAGAAGTTTATGACCATCTAATTTGCACAAGGGAGAATGAAAATGATTAGGTATCTGGATACACATTACATGATTTATCCATCTAGTGCTCACCTTTTCTTTGTTCTGATATTCTTCAGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

mRNA sequence

ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAACCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

Coding sequence (CDS)

ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAACCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

Protein sequence

MCGERISSHLIKPITIRLPHPSTFLLCSAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Homology
[Close]
BLAST of Clc11G01220 vs. NCBI nr
Match: XP_038888890.1 (40S ribosomal protein S5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.4e-111
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 32  YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG 91
           YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG
Sbjct: 12  YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG 71

Query: 92  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD 151
           RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD
Sbjct: 72  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD 131

Query: 152 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 211
           AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA
Sbjct: 132 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 191

Query: 212 DELINAAKGSSNSYAIKKKDEIERVAKANR 242
           DELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 192 DELINAAKGSSNSYAIKKKDEIERVAKANR 221

[Close]
BLAST of Clc11G01220 vs. NCBI nr
Match: XP_008447164.1 (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0 

Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S ++ GIMAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 66

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 126

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]
BLAST of Clc11G01220 vs. NCBI nr
Match: XP_008456864.1 (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0 

Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S+ + G MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 40  SSTFSGTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 99

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 100 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 159

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 160 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 219

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 220 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]
BLAST of Clc11G01220 vs. NCBI nr
Match: KAE8652818.1 (hypothetical protein Csa_022860 [Cucumis sativus])

HSP 1 Score: 407.9 bits (1047), Expect = 6.0e-110
Identity = 208/216 (96.30%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 26  LCSAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATY 85
           LCS   +GIMAVEVDV +QELTQ HHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATY
Sbjct: 264 LCSYQQFGIMAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATY 323

Query: 86  VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP 145
           VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP
Sbjct: 324 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP 383

Query: 146 IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT 205
           IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT
Sbjct: 384 IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT 443

Query: 206 IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 444 IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 479

[Close]
BLAST of Clc11G01220 vs. NCBI nr
Match: XP_038888891.1 (40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888893.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038893011.1 40S ribosomal protein S5-like [Benincasa hispida] >XP_038893013.1 40S ribosomal protein S5-like [Benincasa hispida] >KAA0032160.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa] >TYK14405.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 5.1e-109
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.2e-97
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.7e-97
Identity = 180/190 (94.74%), Postives = 188/190 (98.95%), Query Frame = 0 

Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           +VKLFNRW+FDDVQ++D+SL+DYIGV P+KHATYVPHTAGRYSVKRFRKAQCPIVERLTN
Sbjct: 8   EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVV
Sbjct: 68  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187

Query: 232 EIERVAKANR 242
           EIERVAKANR
Sbjct: 188 EIERVAKANR 197

[Close]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.4e-96
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0 

Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 232 EIERVAKANR 242
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0 

Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 232 EIERVAKANR 242
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3BGS9 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.9e-111
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0 

Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S ++ GIMAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 66

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 126

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3C3S7 (40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0 

Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S+ + G MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 40  SSTFSGTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 99

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 100 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 159

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 160 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 219

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 220 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A5A7SN17 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00550 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.5e-109
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A5D3D3Q1 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00570 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3BGS8 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 357.5 bits (916), Expect = 8.7e-99
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 357.5 bits (916), Expect = 8.7e-99
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 354.0 bits (907), Expect = 9.6e-98
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 354.0 bits (907), Expect = 9.6e-98
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0 

Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Clc11G01220 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-08
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0 

Query: 108 RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 167
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 168 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 227
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 228 AIKKKDEIERVAKANR 242
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:
BLAST of Clc11G01220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888890.15.4e-111100.0040S ribosomal protein S5-like isoform X1 [Benincasa hispida][more]
XP_008447164.11.2e-11097.66PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo][more]
XP_008456864.12.7e-11097.66PREDICTED: 40S ribosomal protein S5-like [Cucumis melo][more]
KAE8652818.16.0e-11096.30hypothetical protein Csa_022860 [Cucumis sativus][more]
XP_038888891.15.1e-109100.0040S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S... [more]
BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUT91.2e-9788.4140S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1[more]
O657312.7e-9794.7440S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1[more]
P514271.4e-9688.4140S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2[more]
Q5E9882.9e-8381.0540S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3[more]
P467822.9e-8381.0540S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4[more]
BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BGS95.9e-11197.6640S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682... [more]
A0A1S3C3S71.3e-11097.6640S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1[more]
A0A5A7SN172.5e-109100.0040S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3D3Q13.2e-10999.5240S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3BGS83.2e-10999.5240S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682... [more]
BLAST of Clc11G01220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37270.18.7e-9988.41ribosomal protein 5B [more]
AT2G37270.28.7e-9988.41ribosomal protein 5B [more]
AT3G11940.19.6e-9888.41ribosomal protein 5A [more]
AT3G11940.29.6e-9888.41ribosomal protein 5A [more]
ATCG00900.15.4e-0835.29Ribosomal protein S7p/S5e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 34..241
e-value: 1.5E-96
score: 323.8
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 54..241
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 25..241
e-value: 5.0E-40
score: 135.5
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 35..241
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 95..241
e-value: 9.3E-37
score: 126.0
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 53..241
e-value: 7.1E-90
score: 297.6
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 54..241
e-value: 3.12363E-138
score: 383.828
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 35..241
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 107..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G01220.2Clc11G01220.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding