Clc08G03020 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCAATTTTAGATGATCAAGACAGAGATTCAAAGTTATTTAAAGAAAAAAAGAAAAAATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAGCGATAATGCCAAAGCTCGCCGTCGACGGCGGTCAGGGAATGTTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGGTCAGCTCGAAGGACCGGCGGCAGTCAAACCAACCGTGTCCCTCCGCCGAAGATGAGCTCTGGTGGCGGCGGTAAGACAAATTAGGATGAAAGTTGAAGGTTTTTAATTTTCCTTTACATTTTGGATTATTTATTTTTCTTGTAAGTGTGTAGTTATGTAGTTGGTGACACGTAGTTAGAACACGTTTAAATTTTGGTTGCATTGTTCTTTACTTGTGTATATCTTTTTGGGTTTAAATTTTGTTTGACTTTCATTTAATTTTCTTTGTCCTCTTTTTAAGTTTTTCAAACATATTGTAAGACATAATCATAATAACAATATTAACTAATAATTTAGAGATAAGGTTGAAAGTAGGATTGGCAAAAAAATCTATAGGTCGGGGAATCCTTGATTTAATTGGGGATGTTAGTCAAATCGGAGATCTTTTTAAGAACCTTGTTTGGGAATGGGGTGGGGACGGAGAGGGTATCCCTGCCCTGAGCCTGACCCGATTAAATAAAAAGTTAATAATATATATAAAAGATGTTGATTCTCGCTCTCGCATCCTTTCCTCACTCACTATCTCTCTCGCTTTCTCACACTCTTTCTCTCTCTCTTTCTCTCTCTTGCGTCGGAATGGGTCCTTGCGTGGACCCATTTCCCCAATGGGATAGGCAGGTCCCCCGCTCCGCCCCGGCCTGGCTCCGTTGCCAACCATAGTTAAAAGTTGGTATAAAACAAAATTACTTTTCCAAATTCAAATGAAGTTTTAGGTACCAACAAATTTCATCTCAATGTCAAAATCTTGACATGATATAGGTGTTGCCTCAAATCAAAATATGGGCACACTCCAAACATCTATCGAATCAAGTTGA CCAATTTTAGATGATCAAGACAGAGATTCAAAGTTATTTAAAGAAAAAAAGAAAAAATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAGCGATAATGCCAAAGCTCGCCGTCGACGGCGGTCAGGGAATGTTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGGTCAGCTCGAAGGACCGGCGGCAGTCAAACCAACCGTGTCCCTCCGCCGAAGATGAGCTCTGGTGGCGGCGGTGTTGCCTCAAATCAAAATATGGGCACACTCCAAACATCTATCGAATCAAGTTGA ATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAGCGATAATGCCAAAGCTCGCCGTCGACGGCGGTCAGGGAATGTTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGGTCAGCTCGAAGGACCGGCGGCAGTCAAACCAACCGTGTCCCTCCGCCGAAGATGAGCTCTGGTGGCGGCGGTGTTGCCTCAAATCAAAATATGGGCACACTCCAAACATCTATCGAATCAAGTTGA MESSSSSLQKSNSDNAKARRRRRSGNVGAGGQINRLSRSARRTGGSQTNRVPPPKMSSGGGGVASNQNMGTLQTSIESS Homology
BLAST of Clc08G03020 vs. NCBI nr
Match: KAE8646590.1 (hypothetical protein Csa_005634, partial [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05 Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Clc08G03020 vs. NCBI nr
Match: XP_022930152.1 (proline-rich protein 36-like [Cucurbita moschata]) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Clc08G03020 vs. NCBI nr
Match: KAA0048493.1 (hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK28285.1 hypothetical protein E5676_scaffold600G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04 Identity = 41/65 (63.08%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Clc08G03020 vs. ExPASy TrEMBL
Match: A0A0A0KAN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.2e-06 Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of Clc08G03020 vs. ExPASy TrEMBL
Match: A0A6J1EPK7 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.3e-06 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Clc08G03020 vs. ExPASy TrEMBL
Match: A0A5D3DY74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001020 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.2e-05 Identity = 41/65 (63.08%), Postives = 45/65 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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