Clc05G18200 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G18200
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein 1-like
Location	ClcChr05: 27221635 .. 27222854 (+)
RNA-Seq Expression	Clc05G18200
Synteny	Clc05G18200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAATCAAAAAAATAAAAATAAAAATAAAAATCTCAGCTCCTTCTTTCAAATTATGGAATCCCCGACCGAGCGGAACCCATTTTCCGGCGACGGCGAGGAAGAGGATGAGAAAGAAATTAGCGGGGAATTATCGGAGGAGCGGAGCAGGCTTTTGGATCTTCAACTCTCATCAAATTCTTCAGATTCAACAACAAGACCCAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCCCACAAAAGAGAGAGGACTTTAGCCAAGCGAGTCCAGAAATTCGATTGGGCGGCCGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTCGTTGGGAATTCACGCGCACTCTCAGCAAATTCAGAAGCCAGCTATGGGATTGTATTTTGGTGGGGCAGGGCCTAGTTCTCAGTTATGGCCAAGGCCTTTGTTTATGGGTCAGCAGCCGGCGGTGGGTCGGTTGACGGCGGAGGTCGGTGGCCGGAATTTTGGAAGATTTGATGACTTGGGAGGATGGGCGGCGATTGGAAGCTCAAACGCGGGTAATGAGAGTAGTAATAATGTTAATATTGTTCATTCTCAGACCAAACAAGATCAAGATCAGTCCAGTTTTCTTGATTTGTCTCTTAAACTCTAACCTTGAGCAATTTGTTGTTGTTATTATTATTATTATTCACTTATCCTAATTATTAGGTTAATTAAATTGTTTTTTACTTTCATATATGAAAAGGTTGGGTAATTTAGCCATATTTATACATTTATTTAGTCTCTATTTAATAAGAAATTATTCCAGGCTGAGAAATAATGGATTTGGTGGTTTCATATAGTTGGTTGTATAAGAATGAAACTTTAAAATATATACACACACACACAGAGATTATTTGTTAGATCAAGAGTGTAGTTGATTTGTTTTTGGAACATGGCAATCAAATTCATAGCTAGTAAAGTTAAACTGTTGGACTTTTCTTAGTATAGCGAATGTGTGAGATGTCCATTACAATTAAATTATGTTTATATTAACAAACCGCTAGACTCACTAAAATGTAGAGAATTGTGAAATCTAATAGAAAATTTGTAAGATTTAGTGCGAGTTAAGACAAGACTTAAAAATTCAAATGGTGTACTATATAAATTTAATTTAGGGTTGACTTCAAATATATAAAAATGAACAAAAAT

mRNA sequence

AAAAAAAAAAATCAAAAAAATAAAAATAAAAATAAAAATCTCAGCTCCTTCTTTCAAATTATGGAATCCCCGACCGAGCGGAACCCATTTTCCGGCGACGGCGAGGAAGAGGATGAGAAAGAAATTAGCGGGGAATTATCGGAGGAGCGGAGCAGGCTTTTGGATCTTCAACTCTCATCAAATTCTTCAGATTCAACAACAAGACCCAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCCCACAAAAGAGAGAGGACTTTAGCCAAGCGAGTCCAGAAATTCGATTGGGCGGCCGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTCGTTGGGAATTCACGCGCACTCTCAGCAAATTCAGAAGCCAGCTATGGGATTGTATTTTGGTGGGGCAGGGCCTAGTTCTCAGTTATGGCCAAGGCCTTTGTTTATGGGTCAGCAGCCGGCGGTGGGTCGGTTGACGGCGGAGGTCGGTGGCCGGAATTTTGGAAGATTTGATGACTTGGGAGGATGGGCGGCGATTGGAAGCTCAAACGCGGGTAATGAGAGTAGTAATAATGTTAATATTGTTCATTCTCAGACCAAACAAGATCAAGATCAGTCCAGTTTTCTTGATTTGTCTCTTAAACTCTAACCTTGAGCAATTTGTTGTTGTTATTATTATTATTATTCACTTATCCTAATTATTAGGTTAATTAAATTGTTTTTTACTTTCATATATGAAAAGGTTGGGTAATTTAGCCATATTTATACATTTATTTAGTCTCTATTTAATAAGAAATTATTCCAGGCTGAGAAATAATGGATTTGGTGGTTTCATATAGTTGGTTGTATAAGAATGAAACTTTAAAATATATACACACACACACAGAGATTATTTGTTAGATCAAGAGTGTAGTTGATTTGTTTTTGGAACATGGCAATCAAATTCATAGCTAGTAAAGTTAAACTGTTGGACTTTTCTTAGTATAGCGAATGTGTGAGATGTCCATTACAATTAAATTATGTTTATATTAACAAACCGCTAGACTCACTAAAATGTAGAGAATTGTGAAATCTAATAGAAAATTTGTAAGATTTAGTGCGAGTTAAGACAAGACTTAAAAATTCAAATGGTGTACTATATAAATTTAATTTAGGGTTGACTTCAAATATATAAAAATGAACAAAAAT

Coding sequence (CDS)

ATGGAATCCCCGACCGAGCGGAACCCATTTTCCGGCGACGGCGAGGAAGAGGATGAGAAAGAAATTAGCGGGGAATTATCGGAGGAGCGGAGCAGGCTTTTGGATCTTCAACTCTCATCAAATTCTTCAGATTCAACAACAAGACCCAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCCCACAAAAGAGAGAGGACTTTAGCCAAGCGAGTCCAGAAATTCGATTGGGCGGCCGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTCGTTGGGAATTCACGCGCACTCTCAGCAAATTCAGAAGCCAGCTATGGGATTGTATTTTGGTGGGGCAGGGCCTAGTTCTCAGTTATGGCCAAGGCCTTTGTTTATGGGTCAGCAGCCGGCGGTGGGTCGGTTGACGGCGGAGGTCGGTGGCCGGAATTTTGGAAGATTTGATGACTTGGGAGGATGGGCGGCGATTGGAAGCTCAAACGCGGGTAATGAGAGTAGTAATAATGTTAATATTGTTCATTCTCAGACCAAACAAGATCAAGATCAGTCCAGTTTTCTTGATTTGTCTCTTAAACTCTAA

Protein sequence

MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAMGLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESSNNVNIVHSQTKQDQDQSSFLDLSLKL

Homology

[Close]

BLAST of Clc05G18200 vs. NCBI nr
Match: XP_038899458.1 (zinc finger protein 1-like [Benincasa hispida])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 188/211 (89.10%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           MES T+RNPFSGDGEE+DEKEI+GE S++RS LL+LQLSSNS DSTT+PRIFSCNYCQRK
Sbjct: 1   MESQTDRNPFSGDGEEDDEKEITGEFSDDRSSLLELQLSSNSPDSTTKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAA----IPLHGGAFDRRSSLGIHAHSQQIQ 120
           FFSSQALGGHQNAHKRERTLAKRVQKFDWAAA    IPLHGGAFDRRSSLGIHAHSQQIQ
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAAASIPLHGGAFDRRSSLGIHAHSQQIQ 120

Query: 121 KPAMGLYFGGAGP-SSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNA 180
           KPA+GL+FGGAGP SSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFD++ GWAAIGSSNA
Sbjct: 121 KPAVGLFFGGAGPASSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDEVAGWAAIGSSNA 180

Query: 181 GNESSNNVNIVHSQTKQDQDQSSFLDLSLKL 207
           GNES+NNVNIVHSQTKQDQDQS+FLDLSLKL
Sbjct: 181 GNESNNNVNIVHSQTKQDQDQSNFLDLSLKL 211

[Close]

BLAST of Clc05G18200 vs. NCBI nr
Match: KAG6591545.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 3.2e-88
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEEEDE+E + ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEEDERE-TAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 120

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPRPLFMGQQPAVGRLT E+GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 121 --FFSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERS 180

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTKQDQDQ++FLDLSLKL
Sbjct: 181 NNVSIVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of Clc05G18200 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 7.2e-88
Identity = 171/206 (83.01%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEE+DE+E + ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDERE-TAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 120

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPRPLFMGQQPAVGRLT E+GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 121 --FFSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERS 180

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTKQDQDQ++FLDLSLKL
Sbjct: 181 NNVSIVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of Clc05G18200 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 171/206 (83.01%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEE+DE+E   ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDERE-PAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 161

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPRPLFMGQQPAVGRLT E+GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 162 --FFSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERS 221

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTKQDQDQ++FLDLSLKL
Sbjct: 222 NNVSIVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of Clc05G18200 vs. NCBI nr
Match: XP_023536424.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 170/206 (82.52%), Postives = 185/206 (89.81%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEE+DE+E   ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDERE-PAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 120

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPRPLFMGQQPAVGRLT E GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 121 --FFSGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERS 180

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTK DQDQ++FLDLSLKL
Sbjct: 181 NNVSIVHSQTKPDQDQTNFLDLSLKL 202

[Close]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 41  NSSDSTTRPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAA-------- 100
           N S ++T  ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR Q+   +A+        
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 101 --IPLHGGAFDRRSSLGIHAHSQQIQKPAMGLYFGGAGPSSQL-WPRPLFMGQQPAVGR 149
             +P H G ++   SLGI AHS   +   +  Y G  G   Q+ W R L   QQPA+G+
Sbjct: 110 SPLPFH-GQYNNHRSLGIQAHSISHK---LSSYNGFGGHYGQINWSR-LPFDQQPAIGK 163

[Close]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18
Identity = 78/214 (36.45%), Postives = 108/214 (50.47%), Query Frame = 0


Query: 24  GELSEERSRLLDLQLSSNSSDS--------TTRPRIFSCNYCQRKFFSSQALGGHQNAHK 83
           G  +     L+D   +S+SS S           PR+FSCNYCQRKF+SSQALGGHQNAHK
Sbjct: 32  GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query: 84  RERTLAKR----------------------VQKFDWAAAIPLHGGAFDRRSSLGIHAHSQ 143
           RERTLAKR                      V +F   A++PLH G+ + RS+LGI AHS 
Sbjct: 92  RERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLH-GSVNNRSTLGIQAHS- 151

Query: 144 QIQKPAMGLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSS 203
            I KP+    F G   +S        + Q+P +G++  E       +F         G++
Sbjct: 152 TIHKPS----FLGRQTTSLSHVFKQSIHQKPTIGKMLPE-------KFH----LEVAGNN 211

Query: 204 NAGNESSNNVNIVHSQTKQ-DQDQSSFLDLSLKL 207
           N+   ++    I H ++ Q D +Q   +DL+LKL
Sbjct: 212 NSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 75/211 (35.55%), Postives = 89/211 (42.18%), Query Frame = 0


Query: 17  EDEKEISGELS-----------EERSRLLDLQLSSNSSDS----------TTRPRIFSCN 76
           ED K IS  LS           +  S  L L LSS S  S          +   R+FSCN
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 77  YCQRKFFSSQALGGHQNAHKRERTLAKRVQKF-------------DWAAA--------IP 136
           YCQRKF+SSQALGGHQNAHKRERTLAKR  +              ++AAA        +P
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 137 LHGGAFDRRSS---LGIHAHS----------------QQIQKPAMGLYFGGAGP------ 160
           LHG      +S   LGI AHS                + I +   G YFG   P      
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQG-YFGNCIPFYVEDD 208

[Close]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 52/117 (44.44%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 2   ESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDST------TRPRIFSCN 61
           +  +   P S  GE    +++S   S   S  LDL+L+   +D T        PR+FSCN
Sbjct: 5   DDASRETPASRGGEASSNQDLSKPESNHVS--LDLKLNDTFNDDTKSTKCEANPRVFSCN 64

Query: 62  YCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHS 113
           YC+RKF+SSQALGGHQNAHKRERT+AKR            H       SSLG+ AHS
Sbjct: 65  YCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFG-HHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 39 SSNSSDSTTRPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 84
          S+NSS    +PR+FSCNYCQRKF+SSQALGGHQNAHK ERTLAK+
Sbjct: 39 STNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

[Close]

BLAST of Clc05G18200 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.0e-88
Identity = 171/206 (83.01%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEE+DE+E   ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDERE-PAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 161

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPRPLFMGQQPAVGRLT E+GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 162 --FFSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERS 221

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTKQDQDQ++FLDLSLKL
Sbjct: 222 NNVSIVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of Clc05G18200 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 169/206 (82.04%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRK 60
           ME  T+RNP SGDGEE+D++E   ELS++RS LLDLQLSSNSSD+TT+PR+FSCNYCQRK
Sbjct: 41  MEPLTDRNPLSGDGEEDDDRE-PAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRK 100

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQKPAM 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLGIHAHSQQIQKP  
Sbjct: 101 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKPVG 160

Query: 121 GLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAGNESS 180
             +F G GP+SQLWPR LFMGQQPAVGRLT E+GGRNFGRFDD+ GW AIGSSNAGNE S
Sbjct: 161 --FFSGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERS 220

Query: 181 NNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NNV+IVHSQTKQDQDQ++FLDLSLKL
Sbjct: 221 NNVSIVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of Clc05G18200 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSS-NSSDSTTRPRIFSCNYCQR 60
           MES T+ NPFSG+GEE+DEK    E SEERS LL+LQLSS NSSDST +PRIFSCNYCQR
Sbjct: 1   MESHTDGNPFSGEGEEDDEK----EFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQR 60

Query: 61  KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQK-P 120
           KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLG+HAHSQQIQK P
Sbjct: 61  KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPP 120

Query: 121 AMGLYFGGAGPS--SQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAG 180
           A+GL+FGGAGPS  SQLWPRP+FMGQQPAVGRL AE+GGRNFGR+DD+  W AIG+SNAG
Sbjct: 121 AVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAG 180

Query: 181 NES----SNNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NES    +NN NIVHSQT+QD+DQ++FLDLSLKL
Sbjct: 181 NESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of Clc05G18200 vs. ExPASy TrEMBL
Match: A0A1S3BVD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSS-NSSDSTTRPRIFSCNYCQR 60
           MES T+ NPFSG+GEE+DEK    E SEERS LL+LQLSS NSSDST +PRIFSCNYCQR
Sbjct: 1   MESHTDGNPFSGEGEEDDEK----EFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQR 60

Query: 61  KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHSQQIQK-P 120
           KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLG+HAHSQQIQK P
Sbjct: 61  KFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPP 120

Query: 121 AMGLYFGGAGPS--SQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSSNAG 180
           A+GL+FGGAGPS  SQLWPRP+FMGQQPAVGRL AE+GGRNFGR+DD+  W AIG+SNAG
Sbjct: 121 AVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAG 180

Query: 181 NES----SNNVNIVHSQTKQDQDQSSFLDLSLKL 207
           NES    +NN NIVHSQT+QD+DQ++FLDLSLKL
Sbjct: 181 NESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of Clc05G18200 vs. ExPASy TrEMBL
Match: A0A0A0L4C3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652110 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.1e-79
Identity = 170/215 (79.07%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MESPTERNPFSGD--GEEEDEKEISGELSEERSRLLDLQLSSNSSD-STTRPRIFSCNYC 60
           MES T+ NPFSG+  GEE+D    SGE SEERS LL+LQLSSNSSD ST +PRIFSCNYC
Sbjct: 1   MESHTDGNPFSGELAGEEDD----SGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYC 60

Query: 61  QRKFFSSQALGGHQNAHKRERTLAKRVQKFDW-AAAIPLHGGAFDRR--SSLGIHAHSQQ 120
           QRKFFSSQALGGHQNAHKRERTLAKRVQKFDW AAAIPLHGGAFDRR  SSLG+HAHSQQ
Sbjct: 61  QRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQ 120

Query: 121 IQK-PAMGLYFGG-AGPS-SQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIG 180
           IQK P +GL+FGG A PS SQLWPRP+FMGQQPAVGRL AE+GGRNFGR+DD+  W AIG
Sbjct: 121 IQKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLPAELGGRNFGRYDDVAEWTAIG 180

Query: 181 SSNAGNESSNNVNIVHSQTKQDQDQSSFLDLSLKL 207
           +SNAGN  +NN NIVHSQTKQ++DQ++FLDLSLKL
Sbjct: 181 TSNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 209

[Close]

BLAST of Clc05G18200 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 41  NSSDSTTRPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAA-------- 100
           N S ++T  ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR Q+   +A+        
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 101 --IPLHGGAFDRRSSLGIHAHSQQIQKPAMGLYFGGAGPSSQL-WPRPLFMGQQPAVGR 149
             +P H G ++   SLGI AHS   +   +  Y G  G   Q+ W R L   QQPA+G+
Sbjct: 110 SPLPFH-GQYNNHRSLGIQAHSISHK---LSSYNGFGGHYGQINWSR-LPFDQQPAIGK 163

[Close]

BLAST of Clc05G18200 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 78/214 (36.45%), Postives = 108/214 (50.47%), Query Frame = 0


Query: 24  GELSEERSRLLDLQLSSNSSDS--------TTRPRIFSCNYCQRKFFSSQALGGHQNAHK 83
           G  +     L+D   +S+SS S           PR+FSCNYCQRKF+SSQALGGHQNAHK
Sbjct: 32  GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query: 84  RERTLAKR----------------------VQKFDWAAAIPLHGGAFDRRSSLGIHAHSQ 143
           RERTLAKR                      V +F   A++PLH G+ + RS+LGI AHS 
Sbjct: 92  RERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLH-GSVNNRSTLGIQAHS- 151

Query: 144 QIQKPAMGLYFGGAGPSSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDDLGGWAAIGSS 203
            I KP+    F G   +S        + Q+P +G++  E       +F         G++
Sbjct: 152 TIHKPS----FLGRQTTSLSHVFKQSIHQKPTIGKMLPE-------KFH----LEVAGNN 211

Query: 204 NAGNESSNNVNIVHSQTKQ-DQDQSSFLDLSLKL 207
           N+   ++    I H ++ Q D +Q   +DL+LKL
Sbjct: 212 NSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of Clc05G18200 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-19
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 14  GEEEDEKEISGELSEERSRLLDLQLSSNSSDSTTRPRIFSCNYCQRKFFSSQALGGHQNA 73
           G +  + +++ EL+        +   S +  ++T  ++FSCNYCQR F+SSQALGGHQNA
Sbjct: 66  GYDSSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNA 125

Query: 74  HKRERTLAKRVQKFDWAAA---------IPLHGGAFDRRSSLGIHAHSQQIQKPAMGLYF 133
           HKRERTLAKR Q+   AAA         +P HG   +R  +LGI AHS   +  +  +Y 
Sbjct: 126 HKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNR--TLGIQAHSMSHKPSSYNVYG 185

Query: 134 GGAGPSSQLWPRPLFMGQQPAVGRLTA 152
           G  G  +  W R + + QQPA+ +LT+
Sbjct: 186 GEYGQIN--WSR-IPLVQQPAIAKLTS 207

[Close]

BLAST of Clc05G18200 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-15
Identity = 75/211 (35.55%), Postives = 89/211 (42.18%), Query Frame = 0


Query: 17  EDEKEISGELS-----------EERSRLLDLQLSSNSSDS----------TTRPRIFSCN 76
           ED K IS  LS           +  S  L L LSS S  S          +   R+FSCN
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 77  YCQRKFFSSQALGGHQNAHKRERTLAKRVQKF-------------DWAAA--------IP 136
           YCQRKF+SSQALGGHQNAHKRERTLAKR  +              ++AAA        +P
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 137 LHGGAFDRRSS---LGIHAHS----------------QQIQKPAMGLYFGGAGP------ 160
           LHG      +S   LGI AHS                + I +   G YFG   P      
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQG-YFGNCIPFYVEDD 208

[Close]

BLAST of Clc05G18200 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-15
Identity = 52/117 (44.44%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 2   ESPTERNPFSGDGEEEDEKEISGELSEERSRLLDLQLSSNSSDST------TRPRIFSCN 61
           +  +   P S  GE    +++S   S   S  LDL+L+   +D T        PR+FSCN
Sbjct: 5   DDASRETPASRGGEASSNQDLSKPESNHVS--LDLKLNDTFNDDTKSTKCEANPRVFSCN 64

Query: 62  YCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGIHAHS 113
           YC+RKF+SSQALGGHQNAHKRERT+AKR            H       SSLG+ AHS
Sbjct: 65  YCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFG-HHHRPYTYTSSSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of Clc05G18200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899458.1	2.7e-98	89.10	zinc finger protein 1-like [Benincasa hispida]	[more]
KAG6591545.1	3.2e-88	83.50	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024430.1	7.2e-88	83.01	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936656.1	1.2e-87	83.01	zinc finger protein 1-like [Cucurbita moschata]	[more]
XP_023536424.1	1.8e-86	82.52	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc05G18200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	2.2e-18	47.90	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	3.7e-18	36.45	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	1.2e-13	35.55	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.2e-13	44.44	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	2.7e-13	77.78	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Clc05G18200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F839	6.0e-88	83.01	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	1.1e-86	82.04	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A5A7VC97	1.5e-86	81.31	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BVD7	1.5e-86	81.31	zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1	[more]
A0A0A0L4C3	5.1e-79	79.07	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652110 P...	[more]

BLAST of Clc05G18200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25160.1	1.5e-19	47.90	zinc finger protein 3	[more]
AT1G80730.1	2.6e-19	36.45	zinc-finger protein 1	[more]
AT5G10970.1	4.5e-19	40.82	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	8.7e-15	35.55	zinc finger protein 4	[more]
AT1G24625.1	8.7e-15	44.44	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 27..91 e-value: 7.5E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 38..206
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 54..74
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 52..79 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 48..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G18200.1	Clc05G18200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane