Clc03G04460 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G04460
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPLATZ transcription factor family protein
LocationClcChr03: 4358044 .. 4360497 (-)
RNA-Seq ExpressionClc03G04460
SyntenyClc03G04460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAATAATATGAGCAGTAGAAGAAGCAGCAGCAGTTCTTGTAATGGTAGTAGCATTGTTTAGAAATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTATATCCTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTCTTTTAACATTTTTTTTATAAGAAAAAAAATAATAAAGGAAGGAAGAAAATTAAAACTTATCCTACTTTTGGGATTTGGTTGGTTTCCTATTCGTAGACGACTCCATTTTTATCTATCTTTCCTGCCAGACCTTTCTCACTTGTTGCTTTCACTCAATGTGAACATTTGACTCTTTTGTCCCTCTTTTTTTTTTTTTTTTTTCCTCTCTTTTTAATTAATTAAGATTTCAATTAACGAAATTTTAATGGGGGTGTTTGTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGGTATATATTTATTTATTTCTTTCTTCAATTTTGTTGCTTGATTATTGATTTATGTATAATTAAGGGAGATGTGTTTTGATGAATTGAAAATGATTGAAATTTGGCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTTTTTCCCTTAATCCCCTCCTAATTTCCCTGCATGCATCCCCTTTTTTTTTAATCTCCATCTATAATATGATTCTAACTCTTAGATTACCATGAATTGTTTCCTTAAATAAAGGCTTGGAACTTATCCCTAATATGATTATACTTTTTAGATTGACTAGTAACCTTTTAGGCGTTTCAACTACTTAACCCATGACTAATATAAATCTATATAAGATAAACATGAAATTGTATCAAAATTAATTCACAATTTAAGAAATATCTCGTTTATCTTATAAAGATTATTCCTTTTCAATGTAAGAAAACTCACACATGCTCCTTCGAGATAGTGTATCTTTTGTTGAAAACTATTTAGATTAGATGCATATTGAGTATCACCTATCTATCTATCATAATTTTTTCATGTGTCAAATTCTTCTTATTATTTTTCTAAAATATTTTAATTCTTTTTAGACGTGAGTGATTGGAGGAGATGTATAAAAATAGAGTATTATCCTCTTGTGTTTAAATAACACGTGAAATTTCATCTAAAAATAATTTGAAATAAGAGGAATAACTCATGTATTAGTAACTATTCAGGAAGTTATTTTTACCATCTTTTATACATGGACTAAACTTAAATTTGCATTCATATTACTCAAAGGATATAATATTAAATTTACCCTTCACCCATAATTTTAAGTTTTTGAGTCCATTATTATTTGATGTAACATAATTTTATATGTGATCTAGGAAATTTTGTTTTCAAATTACTGTGATCACAAATTAATATTGATAATTCTTGGTACAATTTATATTTATATTTATATTTATATTTTTTAATTTGATTGAGTTGACGGGTGATTTAACAACGGGCAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTCTATTTCTTTATTTTATAAACGATTTGGATAATTGTGTTGTGTCGCGTCGGTTTATATTATATAGATGGTTATTCTCGGCAAGGGTTTGGGTTGTGCGGCGGTGGGTGTGGGAATTTCCGATGACTTTATCGGCTTTGTCCGGTCGGGCTATTTTAGAGATATTTCTTATTTGCACCCACCAATTTTGTATTATTTCGTGTAATTTATCGGAACTTGCACGTAAATTATATATTGTGCGTTTGGGTTGTT

mRNA sequence

AAAGAATAATATGAGCAGTAGAAGAAGCAGCAGCAGTTCTTGTAATGGTAGTAGCATTGTTTAGAAATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTCTATTTCTTTATTTTATAAACGATTTGGATAATTGTGTTGTGTCGCGTCGGTTTATATTATATAGATGGTTATTCTCGGCAAGGGTTTGGGTTGTGCGGCGGTGGGTGTGGGAATTTCCGATGACTTTATCGGCTTTGTCCGGTCGGGCTATTTTAGAGATATTTCTTATTTGCACCCACCAATTTTGTATTATTTCGTGTAATTTATCGGAACTTGCACGTAAATTATATATTGTGCGTTTGGGTTGTT

Coding sequence (CDS)

ATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAA

Protein sequence

MANNMMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSVVEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS
Homology
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_038876971.1 (uncharacterized protein LOC120069313 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 234/249 (93.98%), Postives = 237/249 (95.18%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           +MMM  CGST   KPAWLQALMADTFFG+CLLHENRRKSEKNVFCLHCCLSICPHCLPSH
Sbjct: 3   IMMMMECGST---KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 62

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK GSSTN
Sbjct: 63  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTN 122

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
           ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLY ILHRF+ESDFSYSQFEGLRVDGLEGI
Sbjct: 123 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGI 182

Query: 185 DEDGQITPNSVVEDPSQFNKGSSSAPPN-VSSGTHIFKRKNKGTDFLPAGIVLSLSSRRK 244
           DEDGQIT NSVVED SQFNK SSSAP N VSSGTHIFKRKNKGTDFLPAGIVLSLSSRRK
Sbjct: 183 DEDGQITTNSVVEDSSQFNKASSSAPTNVVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRK 242

Query: 245 GAPQRAPLS 253
           GAPQRAPLS
Sbjct: 243 GAPQRAPLS 248

BLAST of Clc03G04460 vs. NCBI nr
Match: XP_011652401.1 (uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hypothetical protein Csa_014000 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 0

Query: 1   MAN--NMMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICP 60
           MAN   MM MN CGS    KPAWLQALMADTFFG+CLLHENRRKSEKNVFCLHCCLSICP
Sbjct: 1   MANLMTMMNMNQCGS----KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICP 60

Query: 61  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 120
           HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK
Sbjct: 61  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 120

Query: 121 QGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRV 180
            GSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLY ILHRF+ESDFSYSQFEGLRV
Sbjct: 121 AGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRV 180

Query: 181 DGLEGIDEDGQITPNSVVEDPSQ-FNKGSS------SAPPNVSSGTHIFKRKNKGTDFLP 240
           DGLEG++EDGQ+TPNSVVED SQ FNK SS      SAP NVSSGTHIFKRKNKGTDFLP
Sbjct: 181 DGLEGMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLP 240

Query: 241 AGIVLSLSSRRKGAPQRAPLS 253
           AGIVLSLSSRRKGAPQRAPLS
Sbjct: 241 AGIVLSLSSRRKGAPQRAPLS 257

BLAST of Clc03G04460 vs. NCBI nr
Match: XP_023001010.1 (uncharacterized protein LOC111495276 [Cucurbita maxima])

HSP 1 Score: 472.2 bits (1214), Expect = 2.7e-129
Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           MMM+N CG+TM AKPAWLQALMA+TFFG+CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGL 180

Query: 185 DEDGQITPNSVVEDPSQFNKGSSSA------PPNVSSGTHIFKRKNKGTDFLPAGIVLSL 244
           DEDGQITPNS+VED SQFN+GSS +      P NVSSGTHIFKRKNK  DFLPAGIVLSL
Sbjct: 181 DEDGQITPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLPAGIVLSL 240

Query: 245 SSRRKGAPQRAPLS 253
           SSRRKGAPQR+PLS
Sbjct: 241 SSRRKGAPQRSPLS 254

BLAST of Clc03G04460 vs. NCBI nr
Match: XP_022924113.1 (uncharacterized protein LOC111431647 [Cucurbita moschata])

HSP 1 Score: 471.5 bits (1212), Expect = 4.6e-129
Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           MMM+N CG+TM AKPAWLQALMA+TFFG+CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGL 180

Query: 185 DEDGQITPNSVVEDPSQFNKGSSSA------PPNVSSGTHIFKRKNKGTDFLPAGIVLSL 244
           DEDGQITPNS+VED SQFN+GSS +      P NVSSGTHIFKRKNK  DFLPAGIVLSL
Sbjct: 181 DEDGQITPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSL 240

Query: 245 SSRRKGAPQRAPLS 253
           SSRRKGAPQR+PLS
Sbjct: 241 SSRRKGAPQRSPLS 254

BLAST of Clc03G04460 vs. NCBI nr
Match: XP_022137485.1 (uncharacterized protein LOC111008916 [Momordica charantia])

HSP 1 Score: 470.7 bits (1210), Expect = 7.9e-129
Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0

Query: 4   NMMMMNHC---GSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHC 63
           NMMM+NHC   G  M  KPAWLQALMA+TFFG+CLLHENRRKSEKNVFCL+CCLSICPHC
Sbjct: 5   NMMMINHCGGGGGAMAGKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLNCCLSICPHC 64

Query: 64  LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG 123
           LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG
Sbjct: 65  LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG 124

Query: 124 SSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDG 183
           SS NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSYSQFEGLRVDG
Sbjct: 125 SS-NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRVDG 184

Query: 184 LEGIDEDGQITPNSVVEDPSQFNKGSSS------APPN---VSSGTHIFKRKNKGTDFLP 243
           LEGID+DGQ+TPNS VEDPSQFNK SS       AP N   VSSGTHIFKRKNKGTDFLP
Sbjct: 185 LEGIDDDGQMTPNSGVEDPSQFNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKGTDFLP 244

Query: 244 AGIVLSLSSRRKGAPQRAPLS 253
           AGIVLSLSSRRKGAPQRAPLS
Sbjct: 245 AGIVLSLSSRRKGAPQRAPLS 264

BLAST of Clc03G04460 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.4e-49
Identity = 109/255 (42.75%), Postives = 143/255 (56.08%), Query Frame = 0

Query: 18  KPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 77
           KPAWL AL A+ FF  C  HE  +K+E+NV CL CC S+CPHC+PSHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 78  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQEPF 137
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K   + N C +CDR LQEP+
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK--GAGNYCTSCDRSLQEPY 124

Query: 138 HFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSVVE 197
             CSL CKVD ++ +  D+   L               +  D L   +     TP S V 
Sbjct: 125 IHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYI--IPQDLLTDDEVAAYETPRSTVV 184

Query: 198 DPSQFNKGSSSAPPNVSSG---------THIFKRKNKGTDFLPAGI------------VL 252
           D  +    SS++  N ++G         TH+ ++K  G                    + 
Sbjct: 185 DGDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDIS 244

BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A0A0LUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 0

Query: 1   MAN--NMMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICP 60
           MAN   MM MN CGS    KPAWLQALMADTFFG+CLLHENRRKSEKNVFCLHCCLSICP
Sbjct: 1   MANLMTMMNMNQCGS----KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICP 60

Query: 61  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 120
           HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK
Sbjct: 61  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 120

Query: 121 QGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRV 180
            GSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLY ILHRF+ESDFSYSQFEGLRV
Sbjct: 121 AGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRV 180

Query: 181 DGLEGIDEDGQITPNSVVEDPSQ-FNKGSS------SAPPNVSSGTHIFKRKNKGTDFLP 240
           DGLEG++EDGQ+TPNSVVED SQ FNK SS      SAP NVSSGTHIFKRKNKGTDFLP
Sbjct: 181 DGLEGMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLP 240

Query: 241 AGIVLSLSSRRKGAPQRAPLS 253
           AGIVLSLSSRRKGAPQRAPLS
Sbjct: 241 AGIVLSLSSRRKGAPQRAPLS 257

BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1KJX3 (uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           MMM+N CG+TM AKPAWLQALMA+TFFG+CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGL 180

Query: 185 DEDGQITPNSVVEDPSQFNKGSSSA------PPNVSSGTHIFKRKNKGTDFLPAGIVLSL 244
           DEDGQITPNS+VED SQFN+GSS +      P NVSSGTHIFKRKNK  DFLPAGIVLSL
Sbjct: 181 DEDGQITPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLPAGIVLSL 240

Query: 245 SSRRKGAPQRAPLS 253
           SSRRKGAPQR+PLS
Sbjct: 241 SSRRKGAPQRSPLS 254

BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1EBG2 (uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC111431647 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.2e-129
Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           MMM+N CG+TM AKPAWLQALMA+TFFG+CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGL 180

Query: 185 DEDGQITPNSVVEDPSQFNKGSSSA------PPNVSSGTHIFKRKNKGTDFLPAGIVLSL 244
           DEDGQITPNS+VED SQFN+GSS +      P NVSSGTHIFKRKNK  DFLPAGIVLSL
Sbjct: 181 DEDGQITPNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSL 240

Query: 245 SSRRKGAPQRAPLS 253
           SSRRKGAPQR+PLS
Sbjct: 241 SSRRKGAPQRSPLS 254

BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1C6S4 (uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008916 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.8e-129
Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0

Query: 4   NMMMMNHC---GSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHC 63
           NMMM+NHC   G  M  KPAWLQALMA+TFFG+CLLHENRRKSEKNVFCL+CCLSICPHC
Sbjct: 5   NMMMINHCGGGGGAMAGKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLNCCLSICPHC 64

Query: 64  LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG 123
           LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG
Sbjct: 65  LPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG 124

Query: 124 SSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDG 183
           SS NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDL GILHRFDESDFSYSQFEGLRVDG
Sbjct: 125 SS-NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRVDG 184

Query: 184 LEGIDEDGQITPNSVVEDPSQFNKGSSS------APPN---VSSGTHIFKRKNKGTDFLP 243
           LEGID+DGQ+TPNS VEDPSQFNK SS       AP N   VSSGTHIFKRKNKGTDFLP
Sbjct: 185 LEGIDDDGQMTPNSGVEDPSQFNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKGTDFLP 244

Query: 244 AGIVLSLSSRRKGAPQRAPLS 253
           AGIVLSLSSRRKGAPQRAPLS
Sbjct: 245 AGIVLSLSSRRKGAPQRAPLS 264

BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1K2W5 (uncharacterized protein LOC111490171 OS=Cucurbita maxima OX=3661 GN=LOC111490171 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.8e-124
Identity = 219/251 (87.25%), Postives = 232/251 (92.43%), Query Frame = 0

Query: 6   MMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHR 65
           M++NHCG+ M AKPAWLQALMA+TFFG+CLLHENRRKSEKNVFCLHCCLSICPHCL SHR
Sbjct: 1   MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHR 60

Query: 66  SHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNA 125
           +HPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS NA
Sbjct: 61  AHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS-NA 120

Query: 126 CFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGID 185
           CFTCDRILQEPFHFCSLSCKVDHMV+QG+DL  ILHRFDESDFSYSQFEGLR+DGLEGID
Sbjct: 121 CFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFEGLRMDGLEGID 180

Query: 186 ED----GQITPNSVVEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSR 245
           +D    GQ+TPNS+VE+P QFNK SS      S GTHIFKRKNKGTDFLPAGIVLSLSSR
Sbjct: 181 DDSGGGGQMTPNSMVEEPPQFNKASS-----CSEGTHIFKRKNKGTDFLPAGIVLSLSSR 240

Query: 246 RKGAPQRAPLS 253
           RKGAPQRAPLS
Sbjct: 241 RKGAPQRAPLS 245

BLAST of Clc03G04460 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 298.1 bits (762), Expect = 6.5e-81
Identity = 154/251 (61.35%), Postives = 180/251 (71.71%), Query Frame = 0

Query: 5   MMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 64
           MMMM      M  KPAWL+ LMA+TFF SC +HE RRKSEKNVFCL CCLS+CPHCLPSH
Sbjct: 11  MMMM------MATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSH 70

Query: 65  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN 124
           RSHPLLQVRRYVYHDV+RL DLEKLIDCS++QPYTINGAKVIFLN R QSR      S+N
Sbjct: 71  RSHPLLQVRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR---AKVSSN 130

Query: 125 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGI 184
            CFTCDRILQEPFHFCSLSCKVD++ YQG+DL  IL+R DESDF+   FEGLR+DG + +
Sbjct: 131 VCFTCDRILQEPFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFT---FEGLRMDGHDQL 190

Query: 185 DEDGQITPNS---VVEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSR 244
            E   +       V+ D S+    S       S      K+K   +++LP  ++ SL +R
Sbjct: 191 GEISTMEDGEDILVISDESEQGNNSHKKEKKKS------KKKKPESNYLPGMVLSSLGNR 243

Query: 245 RKGAPQRAPLS 253
           RKGAP RAP S
Sbjct: 251 RKGAPHRAPFS 243

BLAST of Clc03G04460 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-50
Identity = 109/255 (42.75%), Postives = 143/255 (56.08%), Query Frame = 0

Query: 18  KPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 77
           KPAWL AL A+ FF  C  HE  +K+E+NV CL CC S+CPHC+PSHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 78  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQEPF 137
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K   + N C +CDR LQEP+
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK--GAGNYCTSCDRSLQEPY 124

Query: 138 HFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSVVE 197
             CSL CKVD ++ +  D+   L               +  D L   +     TP S V 
Sbjct: 125 IHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYI--IPQDLLTDDEVAAYETPRSTVV 184

Query: 198 DPSQFNKGSSSAPPNVSSG---------THIFKRKNKGTDFLPAGI------------VL 252
           D  +    SS++  N ++G         TH+ ++K  G                    + 
Sbjct: 185 DGDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDIS 244

BLAST of Clc03G04460 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-48
Identity = 106/259 (40.93%), Postives = 143/259 (55.21%), Query Frame = 0

Query: 16  GAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRY 75
           G  PAWL+ L+ D FF +CL HE+ +K+EKN+ C+ CCL+ICPHCL SH SH LLQ+RRY
Sbjct: 4   GEFPAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRY 63

Query: 76  VYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQE 135
           VY DV+R+ D  KL+DCS IQPYT N +KV+F+N RPQSR  +   S N C TCDR LQ 
Sbjct: 64  VYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR--GSGNICITCDRSLQS 123

Query: 136 PFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSV 195
           P+ FC LSCK+  ++ +   L G L   +  D +               DE    TP+S 
Sbjct: 124 PYLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLT---------------DEVTTTTPSST 183

Query: 196 VEDPSQFNKGSSSAPPN------------VSSGTHIFKRKNKGTDFLPAGIV-------- 252
           +E P+  N+ SS +  N             ++ T I ++K          +         
Sbjct: 184 LE-PTGSNRTSSESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNT 243

BLAST of Clc03G04460 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30
Identity = 63/138 (45.65%), Postives = 86/138 (62.32%), Query Frame = 0

Query: 17  AKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHC----LPSHRSHPLLQV 76
           ++  W++ L+   FFG C+ H+  RK+EKNVFC+ C + IC HC      SH  H  LQ+
Sbjct: 9   SEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQI 68

Query: 77  RRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQ---SRPCKQGSSTNACFTC 136
            +YVY DVIRL +++   DCS IQ Y ING K I LN RPQ   +RP  +  +  +C TC
Sbjct: 69  CKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTC 128

Query: 137 DRILQE-PFHFCSLSCKV 147
            R +Q+ P  FCS+SCK+
Sbjct: 129 KRYIQDHPNLFCSISCKI 146

BLAST of Clc03G04460 vs. TAIR 10
Match: AT1G43000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-30
Identity = 86/235 (36.60%), Postives = 119/235 (50.64%), Query Frame = 0

Query: 19  PAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCC-LSICPHCLPSHRSHPLLQVRRYVY 78
           P WL  ++   +F +C +H    KSE N+FCL C   + C  CL  HR+H ++Q+RR  Y
Sbjct: 9   PPWLTPMLRADYFVTCSIHSQSSKSECNLFCLDCSGNAFCSSCLAHHRTHRVIQIRRSSY 68

Query: 79  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTN-ACFTCDRILQEP 138
           H+V+R+ +++K ID S IQ Y IN AK+ FLN RPQ   C+ G S N  C  C R L + 
Sbjct: 69  HNVVRVSEIQKHIDISCIQTYVINSAKIFFLNARPQ---CRTGKSLNKTCQICSRNLLDS 128

Query: 139 FHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFE-GLRVDGLEGIDEDGQITPNSV 198
           F FCSL+CK++  V  GED    L    +SD S      G+    ++GI         S+
Sbjct: 129 FLFCSLACKLEG-VKNGEDPNLTLFHSGKSDDSSKIINTGICSRLIDGI---------SI 188

Query: 199 VEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAP 251
             D  +       +P   S  +H    +N             + SRRKG PQRAP
Sbjct: 189 AVDDQRSETAGVLSPETPSIESH----RN-----------YPMKSRRKGIPQRAP 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038876971.11.3e-13193.98uncharacterized protein LOC120069313 [Benincasa hispida][more]
XP_011652401.12.1e-12990.04uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hypothetical ... [more]
XP_023001010.12.7e-12988.19uncharacterized protein LOC111495276 [Cucurbita maxima][more]
XP_022924113.14.6e-12988.19uncharacterized protein LOC111431647 [Cucurbita moschata][more]
XP_022137485.17.9e-12989.27uncharacterized protein LOC111008916 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q1G3Q48.4e-4942.75Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LUK61.0e-12990.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1[more]
A0A6J1KJX31.3e-12988.19uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276... [more]
A0A6J1EBG22.2e-12988.19uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC1114316... [more]
A0A6J1C6S43.8e-12989.27uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1K2W54.8e-12487.25uncharacterized protein LOC111490171 OS=Cucurbita maxima OX=3661 GN=LOC111490171... [more]
Match NameE-valueIdentityDescription
AT1G31040.16.5e-8161.35PLATZ transcription factor family protein [more]
AT2G12646.16.0e-5042.75PLATZ transcription factor family protein [more]
AT3G60670.13.3e-4840.93PLATZ transcription factor family protein [more]
AT2G01818.12.4e-3045.65PLATZ transcription factor family protein [more]
AT1G43000.13.1e-3036.60PLATZ transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006734PLATZ transcription factorPFAMPF04640PLATZcoord: 73..146
e-value: 2.5E-28
score: 98.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..219
NoneNo IPR availablePANTHERPTHR31065:SF45SUBFAMILY NOT NAMEDcoord: 19..252
NoneNo IPR availablePANTHERPTHR31065PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 19..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G04460.1Clc03G04460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010150 leaf senescence
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding