Clc03G04460 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAATAATATGAGCAGTAGAAGAAGCAGCAGCAGTTCTTGTAATGGTAGTAGCATTGTTTAGAAATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTATATCCTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTCTTTTAACATTTTTTTTATAAGAAAAAAAATAATAAAGGAAGGAAGAAAATTAAAACTTATCCTACTTTTGGGATTTGGTTGGTTTCCTATTCGTAGACGACTCCATTTTTATCTATCTTTCCTGCCAGACCTTTCTCACTTGTTGCTTTCACTCAATGTGAACATTTGACTCTTTTGTCCCTCTTTTTTTTTTTTTTTTTTCCTCTCTTTTTAATTAATTAAGATTTCAATTAACGAAATTTTAATGGGGGTGTTTGTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGGTATATATTTATTTATTTCTTTCTTCAATTTTGTTGCTTGATTATTGATTTATGTATAATTAAGGGAGATGTGTTTTGATGAATTGAAAATGATTGAAATTTGGCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTTTTTCCCTTAATCCCCTCCTAATTTCCCTGCATGCATCCCCTTTTTTTTTAATCTCCATCTATAATATGATTCTAACTCTTAGATTACCATGAATTGTTTCCTTAAATAAAGGCTTGGAACTTATCCCTAATATGATTATACTTTTTAGATTGACTAGTAACCTTTTAGGCGTTTCAACTACTTAACCCATGACTAATATAAATCTATATAAGATAAACATGAAATTGTATCAAAATTAATTCACAATTTAAGAAATATCTCGTTTATCTTATAAAGATTATTCCTTTTCAATGTAAGAAAACTCACACATGCTCCTTCGAGATAGTGTATCTTTTGTTGAAAACTATTTAGATTAGATGCATATTGAGTATCACCTATCTATCTATCATAATTTTTTCATGTGTCAAATTCTTCTTATTATTTTTCTAAAATATTTTAATTCTTTTTAGACGTGAGTGATTGGAGGAGATGTATAAAAATAGAGTATTATCCTCTTGTGTTTAAATAACACGTGAAATTTCATCTAAAAATAATTTGAAATAAGAGGAATAACTCATGTATTAGTAACTATTCAGGAAGTTATTTTTACCATCTTTTATACATGGACTAAACTTAAATTTGCATTCATATTACTCAAAGGATATAATATTAAATTTACCCTTCACCCATAATTTTAAGTTTTTGAGTCCATTATTATTTGATGTAACATAATTTTATATGTGATCTAGGAAATTTTGTTTTCAAATTACTGTGATCACAAATTAATATTGATAATTCTTGGTACAATTTATATTTATATTTATATTTATATTTTTTAATTTGATTGAGTTGACGGGTGATTTAACAACGGGCAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTCTATTTCTTTATTTTATAAACGATTTGGATAATTGTGTTGTGTCGCGTCGGTTTATATTATATAGATGGTTATTCTCGGCAAGGGTTTGGGTTGTGCGGCGGTGGGTGTGGGAATTTCCGATGACTTTATCGGCTTTGTCCGGTCGGGCTATTTTAGAGATATTTCTTATTTGCACCCACCAATTTTGTATTATTTCGTGTAATTTATCGGAACTTGCACGTAAATTATATATTGTGCGTTTGGGTTGTT AAAGAATAATATGAGCAGTAGAAGAAGCAGCAGCAGTTCTTGTAATGGTAGTAGCATTGTTTAGAAATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTCTATTTCTTTATTTTATAAACGATTTGGATAATTGTGTTGTGTCGCGTCGGTTTATATTATATAGATGGTTATTCTCGGCAAGGGTTTGGGTTGTGCGGCGGTGGGTGTGGGAATTTCCGATGACTTTATCGGCTTTGTCCGGTCGGGCTATTTTAGAGATATTTCTTATTTGCACCCACCAATTTTGTATTATTTCGTGTAATTTATCGGAACTTGCACGTAAATTATATATTGTGCGTTTGGGTTGTT ATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAA MANNMMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSVVEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS Homology
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_038876971.1 (uncharacterized protein LOC120069313 [Benincasa hispida]) HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131 Identity = 234/249 (93.98%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_011652401.1 (uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hypothetical protein Csa_014000 [Cucumis sativus]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 0
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_023001010.1 (uncharacterized protein LOC111495276 [Cucurbita maxima]) HSP 1 Score: 472.2 bits (1214), Expect = 2.7e-129 Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_022924113.1 (uncharacterized protein LOC111431647 [Cucurbita moschata]) HSP 1 Score: 471.5 bits (1212), Expect = 4.6e-129 Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0
BLAST of Clc03G04460 vs. NCBI nr
Match: XP_022137485.1 (uncharacterized protein LOC111008916 [Momordica charantia]) HSP 1 Score: 470.7 bits (1210), Expect = 7.9e-129 Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 8.4e-49 Identity = 109/255 (42.75%), Postives = 143/255 (56.08%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A0A0LUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129 Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1KJX3 (uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129 Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1EBG2 (uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC111431647 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.2e-129 Identity = 224/254 (88.19%), Postives = 237/254 (93.31%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1C6S4 (uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008916 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 3.8e-129 Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0
BLAST of Clc03G04460 vs. ExPASy TrEMBL
Match: A0A6J1K2W5 (uncharacterized protein LOC111490171 OS=Cucurbita maxima OX=3661 GN=LOC111490171 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.8e-124 Identity = 219/251 (87.25%), Postives = 232/251 (92.43%), Query Frame = 0
BLAST of Clc03G04460 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein ) HSP 1 Score: 298.1 bits (762), Expect = 6.5e-81 Identity = 154/251 (61.35%), Postives = 180/251 (71.71%), Query Frame = 0
BLAST of Clc03G04460 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein ) HSP 1 Score: 195.3 bits (495), Expect = 6.0e-50 Identity = 109/255 (42.75%), Postives = 143/255 (56.08%), Query Frame = 0
BLAST of Clc03G04460 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein ) HSP 1 Score: 189.5 bits (480), Expect = 3.3e-48 Identity = 106/259 (40.93%), Postives = 143/259 (55.21%), Query Frame = 0
BLAST of Clc03G04460 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein ) HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30 Identity = 63/138 (45.65%), Postives = 86/138 (62.32%), Query Frame = 0
BLAST of Clc03G04460 vs. TAIR 10
Match: AT1G43000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 129.8 bits (325), Expect = 3.1e-30 Identity = 86/235 (36.60%), Postives = 119/235 (50.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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