Clc02G13803 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAGGGGATTCAAGTCTTTCTATTCAACCTCTGTCAAGCTCAAGGTCACACATGGTCCCCTCTTTCCCTATTGGGTTTTCCCACTCAAAGGCGAGTCTTTATGCCATTTGATAGGGTTATGCCCACACTAATGACGTGTGTCATCTTAAATCGGCTAGGTTGGGCTATCCTTAGCAATGCGTGGCCGACTAATGTCAAGTGGTGTCTTCCCCACACACGATGCGCCAAAAGTTGGCACACTCGGATCTCGTTCGCGTTAGGCCTCACTATAGGTCCATGTTGGCCTTGACCTCCAACCCATTTCTCTCTAGTATAGTCTCGAGATGCTCTGAGTTGACATGAATAAGAGATCCTCGCACTTATCGAGCCTATTGCACTTTGATGCCTAAGTTAGTACAAAAAGTGACTAATTTAGCTAGGTGCAAAAGAAGTAATGTTAGATCTCTCCTTAGGAGATTACTTACTGTTCCCTTTCGGGTGGTCAAATGCAATTATTAACAAGTCTATCCTCTAACACACGTCTATGGGTTACATGGTGTCAGATGCTCGAGATTGTAGGGTGGCGGTCTCTGGATCAGACTTGGTTATTTTCCGATTGGTATATATTCACTAGCTCAATTGGTCAACCCAACTTTTAGGCACTGACATTTCTTTGTCGGGCTTTCCCTTAGGCAATTGGCAACCTTCAACGTATGCAAACTTCTACATAAATTTGTAATTTAACCTTTTTTTAACCCATTATCTATTACAATTTTTCGTTTTTAAAATTACTGTTTGATAACAATTTTAGTTTTTGGTCAATTGATAACAAATTTTGAGTAGGAAAAGGTTCGATGAAGCAGAGTTTAATAAGTAAATAAATAAAATAAAAGAGAGCAAAGATCAATCAAAACTCGAGTAGGAAAAGGTTTCTCATAGCCATTATAAAACGAGGAGAAGAAAGTGGAAAATTTTCATTGACAGTTCTTGGCTGGAGAATCCAAAATTCCAGAGTTAAATTAAATCTATAAAAGGGTAAATAGCTTCATTTGAGTTTGCTTTATATTCAGCCTCTTCTTCTTTGAAATCCTGTTTGTCCATTCACAATTTACTTCTTTTTTTTAACTTTTAATATTTATATTTCCTAATTTCTTTAATATATATATATATATATATATATATATAAAATTTTAAAATATGTTGGTTTAAATAGGATTTTCTTTTGTCAAATATTTCAAATTTATGGTCTATGATCACACTAGTACTTAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATCACTCCAACTTAGATAGTTCAATAGTTGCAATCGAGCAAGGAGGCGCTCCAACTAAAATGATTGTAACGAATGATGAAGAGATAAATTCTCCAATTTAGGTAATTTCTTTTTATAAAAAAATACTGGTAGGTTTTCAAAATGGTTGATAACTAGGGAAAGATACAATTATTTAGCAAATATTAAGAGCTGGAAAAAAATAATTAACAAACAAACAAAGAAAATTTGAAATAATTCATAGATAAAGGCTTAGAACAAATAATAATAACAAAACTGAAATAAAAATCCGGTTGATGAGGCGAAGGAATTGGCCATCCTAATCTCAAGTATTCTGTTGGGGCTTTATAATCTGAAGCTTAATTAAATTATTGTTTATTTCTCTATTTCATAATTAAAAATTTCATTTTTATTGTGTGTGTAGATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCACAAGAAAGACAAAGATTTTCAGGTTTTTTTTTTTTTTTTTTTTGCTTTCTTTTTTTTGGTTTCTGTTCATGTTCCCTTAATTATTTATTGTTTTCAAAATTAATAAAGAAAATAATATTATTATTGTTATTATATTTAGGAAAAGGCAAGTGAAGAAGTATATGTAGGGCATTTAGTTGTGAATTACCGATGTGAAAAATGTGGATGTTCTTTTGATCTTGAAACCTCTCTTCGTTCACATCATTGCAAAGTAATTAAGCTTCTTCTCTTTTTTTCTTTTTTTCTTTTTTTTTTTCTTTTTTTTTTTTAATTCAAATTTTGTATTTTTAATTTTAATATTTATAAATATTTGGAGCAGAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGAAGTGGAGAAAAGTTTGGGGGAGAACAAGTCTTTCAGAAAAAGAAGTAGGAAGGGAATACCAACACGGGCACCTTTCTTTTAG CTAGGGGATTCAAGTCTTTCTATTCAACCTCTGTCAAGCTCAAGGTCACACATGGTCCCCTCTTTCCCTATTGGGTTTTCCCACTCAAAGGCGAGTCTTTATGCCATTTGATAGGGTTATGCCCACACTAATGACATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCACAAGAAAGACAAAGATTTTCAGGAAAAGGCAAGTGAAGAAGTATATGTAGGGCATTTAGTTGTGAATTACCGATGTGAAAAATGTGGATGTTCTTTTGATCTTGAAACCTCTCTTCGTTCACATCATTGCAAAAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGAAGTGGAGAAAAGTTTGGGGGAGAACAAGTCTTTCAGAAAAAGAAGTAGGAAGGGAATACCAACACGGGCACCTTTCTTTTAG ATGCCATTTGATAGGGTTATGCCCACACTAATGACATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCACAAGAAAGACAAAGATTTTCAGGAAAAGGCAAGTGAAGAAGTATATGTAGGGCATTTAGTTGTGAATTACCGATGTGAAAAATGTGGATGTTCTTTTGATCTTGAAACCTCTCTTCGTTCACATCATTGCAAAAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGAAGTGGAGAAAAGTTTGGGGGAGAACAAGTCTTTCAGAAAAAGAAGTAGGAAGGGAATACCAACACGGGCACCTTTCTTTTAG MPFDRVMPTLMTFEASTMDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENKSFRKRSRKGIPTRAPFF Homology
BLAST of Clc02G13803 vs. NCBI nr
Match: KAE8651931.1 (hypothetical protein Csa_006531, partial [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 8.5e-39 Identity = 83/108 (76.85%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Clc02G13803 vs. NCBI nr
Match: XP_023511836.1 (uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Clc02G13803 vs. NCBI nr
Match: KAG6571418.1 (hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Clc02G13803 vs. NCBI nr
Match: KAG7011182.1 (hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.2 bits (339), Expect = 4.0e-28 Identity = 76/112 (67.86%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Clc02G13803 vs. NCBI nr
Match: XP_022928048.1 (uncharacterized protein LOC111434950 [Cucurbita moschata]) HSP 1 Score: 134.8 bits (338), Expect = 5.2e-28 Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Clc02G13803 vs. ExPASy TrEMBL
Match: A0A0A0LQ06 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G287130 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41 Identity = 86/111 (77.48%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Clc02G13803 vs. ExPASy TrEMBL
Match: A0A6J1EMR9 (uncharacterized protein LOC111434950 OS=Cucurbita moschata OX=3662 GN=LOC111434950 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28 Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Clc02G13803 vs. ExPASy TrEMBL
Match: A0A6J1D739 (uncharacterized protein LOC111017959 OS=Momordica charantia OX=3673 GN=LOC111017959 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21 Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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