Clc02G08650 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G08650
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionCyclin
LocationClcChr02: 10377732 .. 10378899 (+)
RNA-Seq ExpressionClc02G08650
SyntenyClc02G08650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCAAAGAAAATCCATCTCATTTTATCTACATTTTCAAAACCATTAACCTCTCTCATTCCTTTCTCACCCAGCGCAGCCATTTATCAAATAATAATGTTGACCGGCAGCAACTTCGCAACTCCAGGCCGAGCGGAGGGCGATAACGCGGCCGAGCCAACGCCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGACTCGTGGCTCGTAACGACTGTCTCGTAAATGGGGTGAGCCAGAGTCAGCAGCTGGAAGAGTTAGGGTGCTGCAGCTCTTCCTCTAGACATTTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACTATTTCTATATTGAAATACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGCCTTGTGGTTGGATTTGTTTATATCGATAGATTGATCCATCGACACCCCGACTCGCTCGTCATCTCCTTGAATGTTCATCGCCTTCTTGTGACTAGTGTCATGGTTGCCTCTAAGATGCTCGACGACGTGTGAGAGTCTTTATATAACTCACATCTAGTTAATTGTTCAAGAGTCTGTTTGAAATGACTTTTTTTTTCTTTCTTTAACGGTTGACAGGCATTACAACAACGCGTTTTACGCGCGAGTGGGAGGGGTGAGCAAAGCAGAGCTGAATAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTCGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGCTGGCATTTGGAGAAAGAGATGTTAATGAATGGCAATGGGGAGATGCAACGAGCGGAAAGACCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTGGACGACACTCTTGTTTCTTCTTCGCCTCCTTGATTATATTCATTGTCTTCTTCTCCTCTTCTCTGCTTATTCAGATATAATTTTGCTTATATGGTGCCTGAGTTAATGCTTGTTTCCTTCTTCGACAATTTAATTAGGGGTTTAATTGATTTTTTTACCTTTTCTTTTTGTAATATAATAATACTACAAAGCTGTTTCGATTTTTTTCTTTTTGAGTTTTTTTTTACTAACATGTGGGGTAGGGCGAAAGAATCCAACTTGTGGCTTTGAGGACTGTCGATATTATAAATTTATATTAGTTGAACTATGTTTGTGC

mRNA sequence

GTCCAAAGAAAATCCATCTCATTTTATCTACATTTTCAAAACCATTAACCTCTCTCATTCCTTTCTCACCCAGCGCAGCCATTTATCAAATAATAATGTTGACCGGCAGCAACTTCGCAACTCCAGGCCGAGCGGAGGGCGATAACGCGGCCGAGCCAACGCCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGACTCGTGGCTCGTAACGACTGTCTCGTAAATGGGGTGAGCCAGAGTCAGCAGCTGGAAGAGTTAGGGTGCTGCAGCTCTTCCTCTAGACATTTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACTATTTCTATATTGAAATACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGCCTTGTGGTTGGATTTGTTTATATCGATAGATTGATCCATCGACACCCCGACTCGCTCGTCATCTCCTTGAATGTTCATCGCCTTCTTGTGACTAGTGTCATGGTTGCCTCTAAGATGCTCGACGACGTGCATTACAACAACGCGTTTTACGCGCGAGTGGGAGGGGTGAGCAAAGCAGAGCTGAATAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTCGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGCTGGCATTTGGAGAAAGAGATGTTAATGAATGGCAATGGGGAGATGCAACGAGCGGAAAGACCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTGGACGACACTCTTGTTTCTTCTTCGCCTCCTTGATTATATTCATTGTCTTCTTCTCCTCTTCTCTGCTTATTCAGATATAATTTTGCTTATATGGTGCCTGAGTTAATGCTTGTTTCCTTCTTCGACAATTTAATTAGGGGTTTAATTGATTTTTTTACCTTTTCTTTTTGTAATATAATAATACTACAAAGCTGTTTCGATTTTTTTCTTTTTGAGTTTTTTTTTACTAACATGTGGGGTAGGGCGAAAGAATCCAACTTGTGGCTTTGAGGACTGTCGATATTATAAATTTATATTAGTTGAACTATGTTTGTGC

Coding sequence (CDS)

ATGTTGACCGGCAGCAACTTCGCAACTCCAGGCCGAGCGGAGGGCGATAACGCGGCCGAGCCAACGCCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGACTCGTGGCTCGTAACGACTGTCTCGTAAATGGGGTGAGCCAGAGTCAGCAGCTGGAAGAGTTAGGGTGCTGCAGCTCTTCCTCTAGACATTTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACTATTTCTATATTGAAATACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGCCTTGTGGTTGGATTTGTTTATATCGATAGATTGATCCATCGACACCCCGACTCGCTCGTCATCTCCTTGAATGTTCATCGCCTTCTTGTGACTAGTGTCATGGTTGCCTCTAAGATGCTCGACGACGTGCATTACAACAACGCGTTTTACGCGCGAGTGGGAGGGGTGAGCAAAGCAGAGCTGAATAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTCGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGCTGGCATTTGGAGAAAGAGATGTTAATGAATGGCAATGGGGAGATGCAACGAGCGGAAAGACCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTGGACGACACTCTTGTTTCTTCTTCGCCTCCTTGA

Protein sequence

MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEMLMNGNGEMQRAERPLMPTNSLDDVSEISVDDTLVSSSPP
Homology
BLAST of Clc02G08650 vs. NCBI nr
Match: XP_038901956.1 (cyclin-U1-1 [Benincasa hispida])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 217/233 (93.13%), Postives = 223/233 (95.71%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTGS+FA PGRAEGDNAAEPTPRVLIILAFVLDRLVARND L+NGVSQS+QLEE GCCS
Sbjct: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNGVSQSRQLEESGCCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
            SS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSL+
Sbjct: 61  PSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLI 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTS+MVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSIMVASKMLDDVHYNNAFYARVGGVSKVELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPLMPTNSLDDVSEISVDDTLVSSSPP 234
           R FETYCWHLEKEML+NGNGEMQR ERPLMPTNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RVFETYCWHLEKEMLLNGNGEMQRMERPLMPTNSLDDVSEISVDDTLASSSPP 233

BLAST of Clc02G08650 vs. NCBI nr
Match: KAE8652302.1 (hypothetical protein Csa_022481 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 8.7e-114
Identity = 217/235 (92.34%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTGS+FA PGR EGDNAAEPTPRVLIILAFVLDRLVARND L+N +  SQQLEELGCCS
Sbjct: 65  MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 124

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 125 SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 184

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 185 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 244

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           R FETYCWHLEKEML+NGNGEMQR ERPL MPTN+LDDVSEISVDDT LVSSSPP
Sbjct: 245 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 297

BLAST of Clc02G08650 vs. NCBI nr
Match: XP_004151930.2 (cyclin-U1-1 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 8.7e-114
Identity = 217/235 (92.34%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTGS+FA PGR EGDNAAEPTPRVLIILAFVLDRLVARND L+N +  SQQLEELGCCS
Sbjct: 57  MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 116

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 117 SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 176

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 177 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 236

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           R FETYCWHLEKEML+NGNGEMQR ERPL MPTN+LDDVSEISVDDT LVSSSPP
Sbjct: 237 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 289

BLAST of Clc02G08650 vs. NCBI nr
Match: XP_008455834.1 (PREDICTED: cyclin-U1-1 [Cucumis melo] >KAA0042430.1 cyclin-U1-1 [Cucumis melo var. makuwa] >TYJ98312.1 cyclin-U1-1 [Cucumis melo var. makuwa])

HSP 1 Score: 414.1 bits (1063), Expect = 8.1e-112
Identity = 215/235 (91.49%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++FA PGRAEGDNAAEPTPRVLIILAFVLDRLVARND L+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           RAFETYC HLEKEML+NGNGEMQR ERPL MPTN+LDDV EISVDDT LVSSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

BLAST of Clc02G08650 vs. NCBI nr
Match: KAG6604845.1 (Cyclin-U1-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 196/233 (84.12%), Postives = 212/233 (90.99%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++F   G AEGDN AEPTPRVLIILA VLDRLVARND +V+G+  + Q+EE   CS
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIVDGI--THQIEESSSCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           +S  H+GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  TS--HIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASK+LDDVHYNNAFYARVGGV+KAELNKLELE+LFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKILDDVHYNNAFYARVGGVNKAELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPLMPTNSLDDVSEISVDDTLVSSSPP 234
           RAFETYC HLEKEML+NGNGE+QR ERP+M TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERPIMATNSLDDVSEISVDDTLASSSPP 229

BLAST of Clc02G08650 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-61
Identity = 124/221 (56.11%), Postives = 155/221 (70.14%), Query Frame = 0

Query: 13  AEGDNAAEP-----------TPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSS 72
           A GD+  +P           TPRVL I++ V+++LVARN+ L                + 
Sbjct: 4   AAGDDELDPVVGPESATEAATPRVLTIISHVMEKLVARNEWL----------------AK 63

Query: 73  SSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVI 132
            ++  G S  AFHGVRAP+ISI KYLERIYKYT CSP+C VVG+VYIDRL H+HP SLV+
Sbjct: 64  QTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVV 123

Query: 133 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSR 192
           SLNVHRLLVT VM+A+K+LDDVHYNN FYARVGGVS A+LNK+ELE+LFLLDFRVTVS R
Sbjct: 124 SLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFR 183

Query: 193 AFETYCWHLEKEMLMN----GNGEMQRAERPLMPTNSLDDV 219
            FE+YC+HLEKEM +N       ++Q  +  L P ++L  +
Sbjct: 184 VFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSPASTLSSL 208

BLAST of Clc02G08650 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-38
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 0

Query: 24  RVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRAPTISI 83
           +++  L+ +L+R+   ND      +QSQ++                 + FHG+  PTI+I
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRV-----------------SVFHGLSRPTITI 71

Query: 84  LKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDV 143
             YLERI+KY NCSPSC VV +VY+DR  HR P   + S NVHRLL+TSVMVA+K LDD+
Sbjct: 72  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 131

Query: 144 HYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEMLM 197
           +YNNA+YA+VGG+S  E+N LEL+ LF L F + V+   F  Y  +L+KEM +
Sbjct: 132 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

BLAST of Clc02G08650 vs. ExPASy Swiss-Prot
Match: Q0J9W0 (Cyclin-P1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP1-1 PE=3 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 4.7e-38
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 0

Query: 18  AAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLG---NSFNAFH 77
           A+ P P  L ++A  + RLVARND           +E L     ++  LG    +F A  
Sbjct: 18  ASAPPPPELDMVARAVQRLVARNDA----------VEALSGGGEAAAGLGAGMAAFEAAR 77

Query: 78  GVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVM 137
           G  AP I + +YLER+++Y    P C VV + Y+D   HR P + V S NVHRLL+  ++
Sbjct: 78  GAPAPRIGVAQYLERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACLL 137

Query: 138 VASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEM 197
           VASK+LDD H+NNAF+ARVGGVS AE+N+LELE+L +LDF V +S R +E Y  HLEKE 
Sbjct: 138 VASKVLDDFHHNNAFFARVGGVSNAEMNRLELELLAVLDFEVMLSHRVYELYREHLEKEA 193

Query: 198 LMNGNG 201
             +G G
Sbjct: 198 RRDGGG 193

BLAST of Clc02G08650 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 85/208 (40.87%), Postives = 128/208 (61.54%), Query Frame = 0

Query: 23  PRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRAPTIS 82
           P+VL++LA  LDR V +N+ L++                 S  + +S   FHG RAP +S
Sbjct: 36  PKVLLLLAAYLDRSVQKNEDLLD-----------------SNKIKDSSTIFHGHRAPDLS 95

Query: 83  ILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDD 142
           I  Y ERI+KY+ CSPSC V+  +Y++R + + P   + SL+VHRLL+TSV+VA+K  DD
Sbjct: 96  IKLYAERIFKYSECSPSCFVLALIYMERYL-QQPHVYMTSLSVHRLLITSVVVAAKFTDD 155

Query: 143 VHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEMLMNGNGEM 202
             +NNAFYARVGG+S  E+N+LEL++LF LDFR+ V    F +YC  LEKE +      +
Sbjct: 156 AFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETM------V 215

Query: 203 QRAERPLMPTNSLDDVSEISVDDTLVSS 231
              +RP+   + ++   ++S + ++  S
Sbjct: 216 LVIDRPIQQVHGVNSTKDLSRNSSIDES 219

BLAST of Clc02G08650 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35
Identity = 77/176 (43.75%), Postives = 109/176 (61.93%), Query Frame = 0

Query: 19  AEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRA 78
           AE  PRV+ IL+ +L R+  RND      +  ++                + +AF G+  
Sbjct: 7   AEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEE--------------AAAVSAFQGLTK 66

Query: 79  PTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASK 138
           P ISI  YLERI+++ NCSPSC VV ++Y+DR + R P   V S NVHRLL+TSV+ A K
Sbjct: 67  PAISIGGYLERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVK 126

Query: 139 MLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEM 195
            +DD+ YNNA++ARVGG+S  E+N LE++ LF + F + V+  AF +YC  L+ EM
Sbjct: 127 FVDDICYNNAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEM 168

BLAST of Clc02G08650 vs. ExPASy TrEMBL
Match: A0A0A0LQH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422050 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.2e-114
Identity = 217/235 (92.34%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTGS+FA PGR EGDNAAEPTPRVLIILAFVLDRLVARND L+N +  SQQLEELGCCS
Sbjct: 1   MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           R FETYCWHLEKEML+NGNGEMQR ERPL MPTN+LDDVSEISVDDT LVSSSPP
Sbjct: 181 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 233

BLAST of Clc02G08650 vs. ExPASy TrEMBL
Match: A0A5D3BEZ8 (Cyclin-U1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00280 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.9e-112
Identity = 215/235 (91.49%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++FA PGRAEGDNAAEPTPRVLIILAFVLDRLVARND L+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           RAFETYC HLEKEML+NGNGEMQR ERPL MPTN+LDDV EISVDDT LVSSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

BLAST of Clc02G08650 vs. ExPASy TrEMBL
Match: A0A1S3C1Y7 (cyclin-U1-1 OS=Cucumis melo OX=3656 GN=LOC103495936 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.9e-112
Identity = 215/235 (91.49%), Postives = 222/235 (94.47%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++FA PGRAEGDNAAEPTPRVLIILAFVLDRLVARND L+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS HLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPL-MPTNSLDDVSEISVDDT-LVSSSPP 234
           RAFETYC HLEKEML+NGNGEMQR ERPL MPTN+LDDV EISVDDT LVSSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

BLAST of Clc02G08650 vs. ExPASy TrEMBL
Match: A0A6J1G7K4 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451542 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.7e-102
Identity = 194/233 (83.26%), Postives = 210/233 (90.13%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++F   G AEGDN AEPTPRVLIILA VLDRLVARND +V+G+  + Q+EE   C 
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIVDGI--THQIEESSSCG 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           +S  H+GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  TS--HIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLN+HRLLVTSVMVASK+LDDVHYNNAFYARVGGV+K ELNKLELE+LFLLDF VTVSS
Sbjct: 121 ISLNIHRLLVTSVMVASKILDDVHYNNAFYARVGGVNKVELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPLMPTNSLDDVSEISVDDTLVSSSPP 234
           RAFETYC HLEKEML+NGNGE+QR ERPLM TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERPLMATNSLDDVSEISVDDTLASSSPP 229

BLAST of Clc02G08650 vs. ExPASy TrEMBL
Match: A0A6J1I5U7 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469864 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 193/233 (82.83%), Postives = 209/233 (89.70%), Query Frame = 0

Query: 1   MLTGSNFATPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCS 60
           MLTG++F   G AEGDN AEPTPRVLIILA VLDRLVARND + +G+  + Q+EE   C 
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIADGI--THQIEESSSCG 60

Query: 61  SSSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           +S  H+GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  TS--HIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSS 180
           ISLNVHRLLVTS+MVASK+LDDVHYNNAFYARVGGV+K ELNKLELE+LFLLDF VTVSS
Sbjct: 121 ISLNVHRLLVTSIMVASKILDDVHYNNAFYARVGGVNKVELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLMNGNGEMQRAERPLMPTNSLDDVSEISVDDTLVSSSPP 234
           RAFETYC HLEKEML+NGNGE+QR ERPLM TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERPLMATNSLDDVSEISVDDTLASSSPP 229

BLAST of Clc02G08650 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62
Identity = 124/221 (56.11%), Postives = 155/221 (70.14%), Query Frame = 0

Query: 13  AEGDNAAEP-----------TPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSS 72
           A GD+  +P           TPRVL I++ V+++LVARN+ L                + 
Sbjct: 4   AAGDDELDPVVGPESATEAATPRVLTIISHVMEKLVARNEWL----------------AK 63

Query: 73  SSRHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVI 132
            ++  G S  AFHGVRAP+ISI KYLERIYKYT CSP+C VVG+VYIDRL H+HP SLV+
Sbjct: 64  QTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVV 123

Query: 133 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSR 192
           SLNVHRLLVT VM+A+K+LDDVHYNN FYARVGGVS A+LNK+ELE+LFLLDFRVTVS R
Sbjct: 124 SLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFR 183

Query: 193 AFETYCWHLEKEMLMN----GNGEMQRAERPLMPTNSLDDV 219
            FE+YC+HLEKEM +N       ++Q  +  L P ++L  +
Sbjct: 184 VFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSPASTLSSL 208

BLAST of Clc02G08650 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 0

Query: 24  RVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRAPTISI 83
           +++  L+ +L+R+   ND      +QSQ++                 + FHG+  PTI+I
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRV-----------------SVFHGLSRPTITI 71

Query: 84  LKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDV 143
             YLERI+KY NCSPSC VV +VY+DR  HR P   + S NVHRLL+TSVMVA+K LDD+
Sbjct: 72  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 131

Query: 144 HYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEMLM 197
           +YNNA+YA+VGG+S  E+N LEL+ LF L F + V+   F  Y  +L+KEM +
Sbjct: 132 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

BLAST of Clc02G08650 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 70/178 (39.33%), Postives = 111/178 (62.36%), Query Frame = 0

Query: 19  AEPTPRVLIILAFVLDRLVARNDCLVNGVSQSQQLEELGCCSSSSRHLGNSFNAFHGVRA 78
           AE  P V+  ++ +L R+   ND L     + +++                 +AF+ V  
Sbjct: 17  AEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRI-----------------SAFNAVTK 76

Query: 79  PTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASK 138
           P+ISI  Y+ERI+KY +CS SC +V ++Y+DR I + P   + S NVHRL++TSV+V++K
Sbjct: 77  PSISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAK 136

Query: 139 MLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHLEKEMLM 197
            +DD+ YNNAFYA+VGG++  E+N LEL+ LF + F++ V+   +  YC  L++EM+M
Sbjct: 137 FMDDLCYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

BLAST of Clc02G08650 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 65/126 (51.59%), Postives = 93/126 (73.81%), Query Frame = 0

Query: 68  NSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHR 127
           +S   F G   P ISI  YL+RI+KY+ CSPSC V+  +YID  +H+   +L+  LNVHR
Sbjct: 60  DSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHK-TRALLKPLNVHR 119

Query: 128 LLVTSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYC 187
           L++T+VM+A+K+ DD ++NNA+YARVGGV+  ELN+LE+E+LF LDF++ V  + F T+C
Sbjct: 120 LIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHC 179

Query: 188 WHLEKE 194
             LEK+
Sbjct: 180 CQLEKQ 184

BLAST of Clc02G08650 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-33
Identity = 61/126 (48.41%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 71  NAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLV 130
           ++F GV  P+ISI  YLERI++Y NCS SC +V ++Y+DR + + P   + S NVHRL++
Sbjct: 50  SSFTGVTKPSISIRSYLERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLII 109

Query: 131 TSVMVASKMLDDVHYNNAFYARVGGVSKAELNKLELEMLFLLDFRVTVSSRAFETYCWHL 190
           TSV+V++K +DD+ YNN +YA+VGG+S+ E+N LEL+ LF + F + V+   F  YC  L
Sbjct: 110 TSVLVSAKFMDDLSYNNEYYAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFL 169

Query: 191 EKEMLM 197
           ++EM M
Sbjct: 170 QREMAM 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901956.11.2e-11893.13cyclin-U1-1 [Benincasa hispida][more]
KAE8652302.18.7e-11492.34hypothetical protein Csa_022481 [Cucumis sativus][more]
XP_004151930.28.7e-11492.34cyclin-U1-1 [Cucumis sativus][more]
XP_008455834.18.1e-11291.49PREDICTED: cyclin-U1-1 [Cucumis melo] >KAA0042430.1 cyclin-U1-1 [Cucumis melo va... [more]
KAG6604845.11.2e-10284.12Cyclin-U1-1, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q9LJ451.8e-6156.11Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1[more]
O805132.1e-3846.24Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
Q0J9W04.7e-3846.24Cyclin-P1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP1-1 PE=3 SV=2[more]
Q75HV01.8e-3740.87Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1[more]
Q7XC351.7e-3543.75Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LQH04.2e-11492.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422050 PE=3 SV=1[more]
A0A5D3BEZ83.9e-11291.49Cyclin-U1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00280 PE... [more]
A0A1S3C1Y73.9e-11291.49cyclin-U1-1 OS=Cucumis melo OX=3656 GN=LOC103495936 PE=3 SV=1[more]
A0A6J1G7K43.7e-10283.26Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451542 PE=3 SV=1[more]
A0A6J1I5U71.1e-10182.83Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469864 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G21870.11.3e-6256.11cyclin p2;1 [more]
AT2G44740.11.5e-3946.24cyclin p4;1 [more]
AT5G07450.11.2e-3339.33cyclin p4;3 [more]
AT3G63120.11.6e-3351.59cyclin p1;1 [more]
AT5G61650.12.8e-3348.41CYCLIN P4;2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 27..175
e-value: 1.1E-36
score: 126.6
NoneNo IPR availableGENE3D1.10.472.10coord: 16..224
e-value: 5.8E-54
score: 184.9
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 16..204
NoneNo IPR availablePANTHERPTHR15615:SF108PROTEIN CNPPD1coord: 16..204
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 81..169
e-value: 2.61113E-4
score: 36.8329
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 83..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G08650.1Clc02G08650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding